RNA–Protein interactions for RNA: ENST00000485886.1

MVB12B-204, Transcript of multivesicular body subunit 12B, humanhuman

TSL 2

Gene MVB12B, Length 4,537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-204ENST00000485886 SOGA1O94964 1423 aa17.7■□□□□ 0.42
MVB12B-204ENST00000485886 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
MVB12B-204ENST00000485886 EIF4G2P78344 907 aaKnown RBP eCLIP17.67■□□□□ 0.42
MVB12B-204ENST00000485886 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
MVB12B-204ENST00000485886 ANP32AP39687 249 aaKnown RBP17.66■□□□□ 0.42
MVB12B-204ENST00000485886 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
MVB12B-204ENST00000485886 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
MVB12B-204ENST00000485886 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
MVB12B-204ENST00000485886 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
MVB12B-204ENST00000485886 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
MVB12B-204ENST00000485886 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
MVB12B-204ENST00000485886 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
MVB12B-204ENST00000485886 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
MVB12B-204ENST00000485886 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
MVB12B-204ENST00000485886 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
MVB12B-204ENST00000485886 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
MVB12B-204ENST00000485886 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
MVB12B-204ENST00000485886 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
MVB12B-204ENST00000485886 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
MVB12B-204ENST00000485886 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
MVB12B-204ENST00000485886 CUX2O14529 1486 aa17.49■□□□□ 0.39
MVB12B-204ENST00000485886 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
MVB12B-204ENST00000485886 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.39
MVB12B-204ENST00000485886 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
MVB12B-204ENST00000485886 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
MVB12B-204ENST00000485886 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
MVB12B-204ENST00000485886 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
MVB12B-204ENST00000485886 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
MVB12B-204ENST00000485886 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
MVB12B-204ENST00000485886 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.37
MVB12B-204ENST00000485886 NBR1Q14596 966 aa17.33■□□□□ 0.36
MVB12B-204ENST00000485886 WIZO95785 1651 aa17.31■□□□□ 0.36
MVB12B-204ENST00000485886 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
MVB12B-204ENST00000485886 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
MVB12B-204ENST00000485886 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
MVB12B-204ENST00000485886 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
MVB12B-204ENST00000485886 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.35
MVB12B-204ENST00000485886 FOXD1Q16676 465 aa17.26■□□□□ 0.35
MVB12B-204ENST00000485886 SETD5Q9C0A6 1442 aa17.25■□□□□ 0.35
MVB12B-204ENST00000485886 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
MVB12B-204ENST00000485886 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
MVB12B-204ENST00000485886 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
MVB12B-204ENST00000485886 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
MVB12B-204ENST00000485886 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
MVB12B-204ENST00000485886 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
MVB12B-204ENST00000485886 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
MVB12B-204ENST00000485886 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
MVB12B-204ENST00000485886 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
MVB12B-204ENST00000485886 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
MVB12B-204ENST00000485886 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
MVB12B-204ENST00000485886 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
MVB12B-204ENST00000485886 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
MVB12B-204ENST00000485886 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
MVB12B-204ENST00000485886 PKD2Q13563 968 aa17.17■□□□□ 0.34
MVB12B-204ENST00000485886 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
MVB12B-204ENST00000485886 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
MVB12B-204ENST00000485886 ARXQ96QS3 562 aa17.15■□□□□ 0.34
MVB12B-204ENST00000485886 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
MVB12B-204ENST00000485886 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
MVB12B-204ENST00000485886 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
MVB12B-204ENST00000485886 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
MVB12B-204ENST00000485886 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
MVB12B-204ENST00000485886 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
MVB12B-204ENST00000485886 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
MVB12B-204ENST00000485886 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
MVB12B-204ENST00000485886 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
MVB12B-204ENST00000485886 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
MVB12B-204ENST00000485886 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
MVB12B-204ENST00000485886 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
MVB12B-204ENST00000485886 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
MVB12B-204ENST00000485886 POGKQ9P215 609 aa17.08■□□□□ 0.33
MVB12B-204ENST00000485886 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
MVB12B-204ENST00000485886 TMF1P82094 1093 aa17.08■□□□□ 0.32
MVB12B-204ENST00000485886 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
MVB12B-204ENST00000485886 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
MVB12B-204ENST00000485886 RGS3P49796 1198 aa17.04■□□□□ 0.32
MVB12B-204ENST00000485886 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
MVB12B-204ENST00000485886 L3MBTL2Q969R5 705 aa17.03■□□□□ 0.32
MVB12B-204ENST00000485886 NUP155O75694 1391 aa17.03■□□□□ 0.32
MVB12B-204ENST00000485886 GGT6Q6P531 493 aa17.03■□□□□ 0.32
MVB12B-204ENST00000485886 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.31
MVB12B-204ENST00000485886 SAFB2Q14151 953 aaKnown RBP eCLIP17.02■□□□□ 0.31
MVB12B-204ENST00000485886 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
MVB12B-204ENST00000485886 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
MVB12B-204ENST00000485886 CARMIL2Q6F5E8 1435 aa17.01■□□□□ 0.31
MVB12B-204ENST00000485886 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
MVB12B-204ENST00000485886 SMARCA4P51532 1647 aa17■□□□□ 0.31
MVB12B-204ENST00000485886 A0A0G2JS52 829 aa16.99■□□□□ 0.31
MVB12B-204ENST00000485886 MLECQ14165 292 aa16.99■□□□□ 0.31
MVB12B-204ENST00000485886 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
MVB12B-204ENST00000485886 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
MVB12B-204ENST00000485886 KANK1Q14678 1352 aa16.96■□□□□ 0.31
MVB12B-204ENST00000485886 BECN1Q14457 450 aa16.96■□□□□ 0.31
MVB12B-204ENST00000485886 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
MVB12B-204ENST00000485886 EFCAB2Q5VUJ9 269 aa16.95■□□□□ 0.3
MVB12B-204ENST00000485886 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
MVB12B-204ENST00000485886 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
MVB12B-204ENST00000485886 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
MVB12B-204ENST00000485886 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
MVB12B-204ENST00000485886 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms