RNA–Protein interactions for RNA: ENST00000485813.5

SPEG-220, Transcript of SPEG complex locus, humanhuman

TSL 5

Gene SPEG, Length 9,854 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-220ENST00000485813 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
SPEG-220ENST00000485813 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
SPEG-220ENST00000485813 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
SPEG-220ENST00000485813 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
SPEG-220ENST00000485813 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
SPEG-220ENST00000485813 KIAA2012Q0VF49 1180 aa20.2■□□□□ 0.82
SPEG-220ENST00000485813 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
SPEG-220ENST00000485813 CLSTN1O94985 981 aa20.19■□□□□ 0.82
SPEG-220ENST00000485813 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
SPEG-220ENST00000485813 NOC3LQ8WTT2 800 aaKnown RBP20.18■□□□□ 0.82
SPEG-220ENST00000485813 FGD1P98174 961 aa20.17■□□□□ 0.82
SPEG-220ENST00000485813 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
SPEG-220ENST00000485813 PLCB2Q00722 1185 aa20.15■□□□□ 0.82
SPEG-220ENST00000485813 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
SPEG-220ENST00000485813 GOLGA6L4A6NEF3 574 aa20.13■□□□□ 0.81
SPEG-220ENST00000485813 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
SPEG-220ENST00000485813 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
SPEG-220ENST00000485813 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
SPEG-220ENST00000485813 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
SPEG-220ENST00000485813 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
SPEG-220ENST00000485813 AMER1Q5JTC6 1135 aaPredicted RBP20.09■□□□□ 0.81
SPEG-220ENST00000485813 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
SPEG-220ENST00000485813 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
SPEG-220ENST00000485813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.07■□□□□ 0.8
SPEG-220ENST00000485813 NPHP1O15259 732 aa20.07■□□□□ 0.8
SPEG-220ENST00000485813 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
SPEG-220ENST00000485813 KCNJ4P48050 445 aa20.06■□□□□ 0.8
SPEG-220ENST00000485813 NOP58Q9Y2X3 529 aaKnown RBP20.06■□□□□ 0.8
SPEG-220ENST00000485813 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
SPEG-220ENST00000485813 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
SPEG-220ENST00000485813 TNNT3P45378 269 aaPredicted RBP20.04■□□□□ 0.8
SPEG-220ENST00000485813 RTN4Q9NQC3 1192 aaKnown RBP20.04■□□□□ 0.8
SPEG-220ENST00000485813 HSCBQ8IWL3 235 aa20.04■□□□□ 0.8
SPEG-220ENST00000485813 PPP1R15AO75807 674 aaPredicted RBP20.03■□□□□ 0.8
SPEG-220ENST00000485813 MIER1Q8N108 512 aa20.02■□□□□ 0.8
SPEG-220ENST00000485813 USP35Q9P2H5 1018 aa20.02■□□□□ 0.8
SPEG-220ENST00000485813 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
SPEG-220ENST00000485813 OS9Q13438 667 aaPredicted RBP20.02■□□□□ 0.8
SPEG-220ENST00000485813 GOLGA6L1Q8N7Z2 621 aa20.01■□□□□ 0.79
SPEG-220ENST00000485813 NAP1L2Q9ULW6 460 aaPredicted RBP20.01■□□□□ 0.79
SPEG-220ENST00000485813 PTMSP20962 102 aa20■□□□□ 0.79
SPEG-220ENST00000485813 CDCA8Q53HL2 280 aa20■□□□□ 0.79
SPEG-220ENST00000485813 MCCP23508 829 aa20■□□□□ 0.79
SPEG-220ENST00000485813 HAP1P54257 671 aaPredicted RBP19.99■□□□□ 0.79
SPEG-220ENST00000485813 MS4A1P11836 297 aa19.99■□□□□ 0.79
SPEG-220ENST00000485813 GNL2Q13823 731 aaKnown RBP19.99■□□□□ 0.79
SPEG-220ENST00000485813 KDM2AQ9Y2K7 1162 aa19.98■□□□□ 0.79
SPEG-220ENST00000485813 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
SPEG-220ENST00000485813 TAOK2Q9UL54 1235 aa19.96■□□□□ 0.79
SPEG-220ENST00000485813 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
SPEG-220ENST00000485813 MAPK8IP3Q9UPT6 1336 aa19.95■□□□□ 0.78
SPEG-220ENST00000485813 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
SPEG-220ENST00000485813 A0A0U1RQG5 324 aaPredicted RBP19.93■□□□□ 0.78
SPEG-220ENST00000485813 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
SPEG-220ENST00000485813 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
SPEG-220ENST00000485813 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
SPEG-220ENST00000485813 SETQ01105 290 aaPredicted RBP19.9■□□□□ 0.78
SPEG-220ENST00000485813 ABCC9O60706 1549 aa19.9■□□□□ 0.78
SPEG-220ENST00000485813 PRM3Q9NNZ6 103 aa19.9■□□□□ 0.78
SPEG-220ENST00000485813 TSPY4P0CV99 314 aa19.89■□□□□ 0.78
SPEG-220ENST00000485813 TSPY10P0CW01 314 aa19.89■□□□□ 0.78
SPEG-220ENST00000485813 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
SPEG-220ENST00000485813 RGS3P49796 1198 aa19.87■□□□□ 0.77
SPEG-220ENST00000485813 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
SPEG-220ENST00000485813 CALRP27797 417 aaKnown RBP19.85■□□□□ 0.77
SPEG-220ENST00000485813 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
SPEG-220ENST00000485813 HTATSF1O43719 755 aaKnown RBP19.83■□□□□ 0.77
SPEG-220ENST00000485813 PLEKHG5O94827 1062 aa19.83■□□□□ 0.77
SPEG-220ENST00000485813 TPM4P67936 248 aa19.82■□□□□ 0.76
SPEG-220ENST00000485813 GBP4Q96PP9 640 aa19.82■□□□□ 0.76
SPEG-220ENST00000485813 CCDC34Q96HJ3 373 aa19.81■□□□□ 0.76
SPEG-220ENST00000485813 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
SPEG-220ENST00000485813 PPP4R2Q9NY27 417 aa19.8■□□□□ 0.76
SPEG-220ENST00000485813 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
SPEG-220ENST00000485813 ISY1Q9ULR0 285 aaKnown RBP19.78■□□□□ 0.76
SPEG-220ENST00000485813 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
SPEG-220ENST00000485813 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
SPEG-220ENST00000485813 KIAA1211Q6ZU35 1233 aa19.76■□□□□ 0.75
SPEG-220ENST00000485813 FRAT1Q92837 279 aaPredicted RBP19.74■□□□□ 0.75
SPEG-220ENST00000485813 DEKP35659 375 aaKnown RBP19.72■□□□□ 0.75
SPEG-220ENST00000485813 PHF14O94880 888 aa19.71■□□□□ 0.75
SPEG-220ENST00000485813 ARID3AQ99856 593 aa19.71■□□□□ 0.75
SPEG-220ENST00000485813 SUPT16HQ9Y5B9 1047 aaKnown RBP19.71■□□□□ 0.75
SPEG-220ENST00000485813 CLIP1P30622 1438 aa19.69■□□□□ 0.74
SPEG-220ENST00000485813 CSPP1Q1MSJ5 1256 aa19.67■□□□□ 0.74
SPEG-220ENST00000485813 TPM3P06753 285 aa19.64■□□□□ 0.74
SPEG-220ENST00000485813 NEUROD2Q15784 382 aa19.64■□□□□ 0.74
SPEG-220ENST00000485813 CEP89Q96ST8 783 aa19.64■□□□□ 0.73
SPEG-220ENST00000485813 GPATCH3Q96I76 525 aa19.63■□□□□ 0.73
SPEG-220ENST00000485813 KAT6BQ8WYB5 2073 aa19.62■□□□□ 0.73
SPEG-220ENST00000485813 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
SPEG-220ENST00000485813 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
SPEG-220ENST00000485813 SPRYD3Q8NCJ5 442 aa19.59■□□□□ 0.73
SPEG-220ENST00000485813 CCDC70Q6NSX1 233 aa19.59■□□□□ 0.73
SPEG-220ENST00000485813 POGKQ9P215 609 aa19.59■□□□□ 0.73
SPEG-220ENST00000485813 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
SPEG-220ENST00000485813 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
SPEG-220ENST00000485813 LMOD2Q6P5Q4 547 aa19.56■□□□□ 0.72
SPEG-220ENST00000485813 PDE4CQ08493 712 aa19.55■□□□□ 0.72
SPEG-220ENST00000485813 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms