RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
CTSA-207ENST00000484855 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
CTSA-207ENST00000484855 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
CTSA-207ENST00000484855 APLP2Q06481 763 aa25.89■■□□□ 1.74
CTSA-207ENST00000484855 EFCAB5A4FU69 1503 aa25.89■■□□□ 1.73
CTSA-207ENST00000484855 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
CTSA-207ENST00000484855 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
CTSA-207ENST00000484855 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
CTSA-207ENST00000484855 FHOD3Q2V2M9 1422 aa25.75■■□□□ 1.71
CTSA-207ENST00000484855 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
CTSA-207ENST00000484855 P3H3Q8IVL6 736 aa25.72■■□□□ 1.71
CTSA-207ENST00000484855 HRCP23327 699 aa25.72■■□□□ 1.71
CTSA-207ENST00000484855 PCF11O94913 1555 aaKnown RBP25.72■■□□□ 1.71
CTSA-207ENST00000484855 GRIN2AQ12879 1464 aa25.7■■□□□ 1.7
CTSA-207ENST00000484855 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
CTSA-207ENST00000484855 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
CTSA-207ENST00000484855 MAP3K1Q13233 1512 aa25.65■■□□□ 1.7
CTSA-207ENST00000484855 CFAP43Q8NDM7 1665 aa25.64■■□□□ 1.69
CTSA-207ENST00000484855 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
CTSA-207ENST00000484855 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
CTSA-207ENST00000484855 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
CTSA-207ENST00000484855 CASKIN1Q8WXD9 1431 aa25.59■■□□□ 1.69
CTSA-207ENST00000484855 KIAA0586Q9BVV6 1533 aa25.59■■□□□ 1.69
CTSA-207ENST00000484855 UGGT2Q9NYU1 1516 aa25.57■■□□□ 1.68
CTSA-207ENST00000484855 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
CTSA-207ENST00000484855 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
CTSA-207ENST00000484855 LRRC9Q6ZRR7 1453 aa25.5■■□□□ 1.67
CTSA-207ENST00000484855 FBLN2P98095 1184 aa25.49■■□□□ 1.67
CTSA-207ENST00000484855 ATP1B4Q9UN42 357 aaPredicted RBP25.49■■□□□ 1.67
CTSA-207ENST00000484855 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
CTSA-207ENST00000484855 LRRIQ1Q96JM4 1722 aa25.47■■□□□ 1.67
CTSA-207ENST00000484855 NUP160Q12769 1436 aa25.47■■□□□ 1.67
CTSA-207ENST00000484855 DISP1Q96F81 1524 aa25.43■■□□□ 1.66
CTSA-207ENST00000484855 CHD1O14646 1710 aa25.42■■□□□ 1.66
CTSA-207ENST00000484855 HECW1Q76N89 1606 aa25.4■■□□□ 1.66
CTSA-207ENST00000484855 RRBP1Q9P2E9 1410 aaKnown RBP25.39■■□□□ 1.66
CTSA-207ENST00000484855 CCDC18Q5T9S5 1454 aa25.33■■□□□ 1.65
CTSA-207ENST00000484855 HNRNPUL2Q1KMD3 747 aaKnown RBP25.33■■□□□ 1.65
CTSA-207ENST00000484855 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
CTSA-207ENST00000484855 CCNB3Q8WWL7 1395 aa25.3■■□□□ 1.64
CTSA-207ENST00000484855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.28■■□□□ 1.64
CTSA-207ENST00000484855 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
CTSA-207ENST00000484855 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
CTSA-207ENST00000484855 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
CTSA-207ENST00000484855 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
CTSA-207ENST00000484855 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
CTSA-207ENST00000484855 JPH4Q96JJ6 628 aa25.26■■□□□ 1.63
CTSA-207ENST00000484855 EPRSP07814 1512 aaKnown RBP25.25■■□□□ 1.63
CTSA-207ENST00000484855 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
CTSA-207ENST00000484855 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
CTSA-207ENST00000484855 CDK13Q14004 1512 aaKnown RBP25.21■■□□□ 1.63
CTSA-207ENST00000484855 MAGI3Q5TCQ9 1506 aa25.19■■□□□ 1.62
CTSA-207ENST00000484855 NUP153P49790 1475 aaKnown RBP25.16■■□□□ 1.62
CTSA-207ENST00000484855 NCOA2Q15596 1464 aa25.14■■□□□ 1.62
CTSA-207ENST00000484855 SHROOM2Q13796 1616 aa25.14■■□□□ 1.62
CTSA-207ENST00000484855 PRG4Q92954 1404 aaPredicted RBP25.11■■□□□ 1.61
CTSA-207ENST00000484855 PLB1Q6P1J6 1458 aa25.11■■□□□ 1.61
CTSA-207ENST00000484855 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
CTSA-207ENST00000484855 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
CTSA-207ENST00000484855 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
CTSA-207ENST00000484855 ABCA8O94911 1581 aa25.06■■□□□ 1.6
CTSA-207ENST00000484855 FAM50AQ14320 339 aaKnown RBP25.06■■□□□ 1.6
CTSA-207ENST00000484855 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
CTSA-207ENST00000484855 ITGAEP38570 1179 aa25.05■■□□□ 1.6
CTSA-207ENST00000484855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
CTSA-207ENST00000484855 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
CTSA-207ENST00000484855 PTPN23Q9H3S7 1636 aa24.98■■□□□ 1.59
CTSA-207ENST00000484855 CDK11AQ9UQ88 783 aaPredicted RBP24.97■■□□□ 1.59
CTSA-207ENST00000484855 PTPRGP23470 1445 aa24.97■■□□□ 1.59
CTSA-207ENST00000484855 ERCC6L2Q5T890 1561 aa24.94■■□□□ 1.58
CTSA-207ENST00000484855 TROQ12816 1431 aaPredicted RBP24.92■■□□□ 1.58
CTSA-207ENST00000484855 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
CTSA-207ENST00000484855 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
CTSA-207ENST00000484855 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
CTSA-207ENST00000484855 ATP10BO94823 1461 aa24.87■■□□□ 1.57
CTSA-207ENST00000484855 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
CTSA-207ENST00000484855 RAB3GAP2Q9H2M9 1393 aa24.86■■□□□ 1.57
CTSA-207ENST00000484855 KIF14Q15058 1648 aa24.86■■□□□ 1.57
CTSA-207ENST00000484855 DHX57Q6P158 1386 aaKnown RBP24.85■■□□□ 1.57
CTSA-207ENST00000484855 UACAQ9BZF9 1416 aa24.85■■□□□ 1.57
CTSA-207ENST00000484855 ITSN2Q9NZM3 1697 aa24.85■■□□□ 1.57
CTSA-207ENST00000484855 ABCC2Q92887 1545 aa24.79■■□□□ 1.56
CTSA-207ENST00000484855 PTPRKQ15262 1439 aa24.79■■□□□ 1.56
CTSA-207ENST00000484855 PLEKHD1A6NEE1 506 aa24.77■■□□□ 1.56
CTSA-207ENST00000484855 CLSPNQ9HAW4 1339 aa24.76■■□□□ 1.55
CTSA-207ENST00000484855 CDC42BPAQ5VT25 1732 aa24.73■■□□□ 1.55
CTSA-207ENST00000484855 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
CTSA-207ENST00000484855 GPATCH8Q9UKJ3 1502 aaKnown RBP24.72■■□□□ 1.55
CTSA-207ENST00000484855 DNMT1P26358 1616 aaKnown RBP24.7■■□□□ 1.55
CTSA-207ENST00000484855 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
CTSA-207ENST00000484855 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.54
CTSA-207ENST00000484855 UHRF1BP1LA0JNW5 1464 aa24.68■■□□□ 1.54
CTSA-207ENST00000484855 CAMSAP2Q08AD1 1489 aa24.67■■□□□ 1.54
CTSA-207ENST00000484855 ZCCHC11Q5TAX3 1644 aaKnown RBP24.67■■□□□ 1.54
CTSA-207ENST00000484855 NAIPQ13075 1403 aa24.66■■□□□ 1.54
CTSA-207ENST00000484855 DAPK1P53355 1430 aa24.65■■□□□ 1.54
CTSA-207ENST00000484855 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.54
CTSA-207ENST00000484855 AKNAQ7Z591 1439 aa24.64■■□□□ 1.54
CTSA-207ENST00000484855 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
CTSA-207ENST00000484855 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms