RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
PCCB-217ENST00000484181 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
PCCB-217ENST00000484181 THOC2Q8NI27 1593 aaKnown RBP25.26■■□□□ 1.63
PCCB-217ENST00000484181 MAP3K1Q13233 1512 aa25.26■■□□□ 1.63
PCCB-217ENST00000484181 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
PCCB-217ENST00000484181 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.622e-6■■■■□ 22.2
PCCB-217ENST00000484181 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
PCCB-217ENST00000484181 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
PCCB-217ENST00000484181 FYCO1Q9BQS8 1478 aa25.14■■□□□ 1.62
PCCB-217ENST00000484181 SAMD9Q5K651 1589 aa25.14■■□□□ 1.62
PCCB-217ENST00000484181 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
PCCB-217ENST00000484181 FHOD3Q2V2M9 1422 aa25.11■■□□□ 1.61
PCCB-217ENST00000484181 PCF11O94913 1555 aaKnown RBP25.11■■□□□ 1.61
PCCB-217ENST00000484181 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
PCCB-217ENST00000484181 CFAP43Q8NDM7 1665 aa25.09■■□□□ 1.61
PCCB-217ENST00000484181 CASKIN1Q8WXD9 1431 aa25.08■■□□□ 1.61
PCCB-217ENST00000484181 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
PCCB-217ENST00000484181 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
PCCB-217ENST00000484181 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
PCCB-217ENST00000484181 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
PCCB-217ENST00000484181 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
PCCB-217ENST00000484181 P3H3Q8IVL6 736 aa25.02■■□□□ 1.6
PCCB-217ENST00000484181 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
PCCB-217ENST00000484181 LRRC9Q6ZRR7 1453 aa25.01■■□□□ 1.59
PCCB-217ENST00000484181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.97■■□□□ 1.59
PCCB-217ENST00000484181 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
PCCB-217ENST00000484181 KIAA0586Q9BVV6 1533 aa24.93■■□□□ 1.58
PCCB-217ENST00000484181 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
PCCB-217ENST00000484181 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
PCCB-217ENST00000484181 CCNB3Q8WWL7 1395 aa24.92■■□□□ 1.58
PCCB-217ENST00000484181 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
PCCB-217ENST00000484181 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
PCCB-217ENST00000484181 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
PCCB-217ENST00000484181 HECW1Q76N89 1606 aa24.85■■□□□ 1.57
PCCB-217ENST00000484181 CHMP7Q8WUX9 453 aaPredicted RBP24.82■■□□□ 1.56
PCCB-217ENST00000484181 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
PCCB-217ENST00000484181 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
PCCB-217ENST00000484181 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
PCCB-217ENST00000484181 PHLDB1Q86UU1 1377 aa24.75■■□□□ 1.55
PCCB-217ENST00000484181 NUP160Q12769 1436 aa24.74■■□□□ 1.55
PCCB-217ENST00000484181 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
PCCB-217ENST00000484181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.72■■□□□ 1.55
PCCB-217ENST00000484181 DISP1Q96F81 1524 aa24.71■■□□□ 1.55
PCCB-217ENST00000484181 SUPT6HQ7KZ85 1726 aaKnown RBP24.7■■□□□ 1.54
PCCB-217ENST00000484181 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
PCCB-217ENST00000484181 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
PCCB-217ENST00000484181 FBLN2P98095 1184 aa24.66■■□□□ 1.54
PCCB-217ENST00000484181 CLSPNQ9HAW4 1339 aa24.65■■□□□ 1.54
PCCB-217ENST00000484181 EPRSP07814 1512 aaKnown RBP24.65■■□□□ 1.54
PCCB-217ENST00000484181 NCOA2Q15596 1464 aa24.62■■□□□ 1.53
PCCB-217ENST00000484181 FGD6Q6ZV73 1430 aa24.62■■□□□ 1.53
PCCB-217ENST00000484181 RAPGEF6Q8TEU7 1601 aa24.6■■□□□ 1.53
PCCB-217ENST00000484181 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
PCCB-217ENST00000484181 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
PCCB-217ENST00000484181 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
PCCB-217ENST00000484181 ITGAEP38570 1179 aa24.54■■□□□ 1.52
PCCB-217ENST00000484181 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
PCCB-217ENST00000484181 CDK13Q14004 1512 aaKnown RBP24.52■■□□□ 1.52
PCCB-217ENST00000484181 DHX57Q6P158 1386 aaKnown RBP24.52■■□□□ 1.52
PCCB-217ENST00000484181 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
PCCB-217ENST00000484181 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
PCCB-217ENST00000484181 SETD5Q9C0A6 1442 aa24.51■■□□□ 1.51
PCCB-217ENST00000484181 NUP153P49790 1475 aaKnown RBP24.5■■□□□ 1.51
PCCB-217ENST00000484181 CHD1O14646 1710 aa24.47■■□□□ 1.51
PCCB-217ENST00000484181 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
PCCB-217ENST00000484181 PTPN23Q9H3S7 1636 aa24.45■■□□□ 1.5
PCCB-217ENST00000484181 MIA2Q96PC5 1412 aa24.45■■□□□ 1.5
PCCB-217ENST00000484181 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
PCCB-217ENST00000484181 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
PCCB-217ENST00000484181 ABCA8O94911 1581 aa24.37■■□□□ 1.49
PCCB-217ENST00000484181 PRG4Q92954 1404 aaPredicted RBP24.37■■□□□ 1.49
PCCB-217ENST00000484181 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
PCCB-217ENST00000484181 SHROOM2Q13796 1616 aa24.35■■□□□ 1.49
PCCB-217ENST00000484181 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
PCCB-217ENST00000484181 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
PCCB-217ENST00000484181 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
PCCB-217ENST00000484181 ITSN2Q9NZM3 1697 aa24.3■■□□□ 1.48
PCCB-217ENST00000484181 PTPRGP23470 1445 aa24.29■■□□□ 1.48
PCCB-217ENST00000484181 AKNAQ7Z591 1439 aa24.29■■□□□ 1.48
PCCB-217ENST00000484181 KIF14Q15058 1648 aa24.23■■□□□ 1.47
PCCB-217ENST00000484181 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
PCCB-217ENST00000484181 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
PCCB-217ENST00000484181 PTPRKQ15262 1439 aa24.22■■□□□ 1.47
PCCB-217ENST00000484181 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
PCCB-217ENST00000484181 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
PCCB-217ENST00000484181 PLEKHD1A6NEE1 506 aa24.21■■□□□ 1.47
PCCB-217ENST00000484181 NAIPQ13075 1403 aa24.21■■□□□ 1.47
PCCB-217ENST00000484181 ZNF316A6NFI3 1004 aaPredicted RBP24.19■■□□□ 1.46
PCCB-217ENST00000484181 ATP10BO94823 1461 aa24.19■■□□□ 1.46
PCCB-217ENST00000484181 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
PCCB-217ENST00000484181 DNMT1P26358 1616 aaKnown RBP24.18■■□□□ 1.46
PCCB-217ENST00000484181 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
PCCB-217ENST00000484181 DAPK1P53355 1430 aa24.14■■□□□ 1.45
PCCB-217ENST00000484181 GPATCH8Q9UKJ3 1502 aaKnown RBP24.13■■□□□ 1.45
PCCB-217ENST00000484181 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
PCCB-217ENST00000484181 CAMSAP2Q08AD1 1489 aa24.11■■□□□ 1.45
PCCB-217ENST00000484181 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
PCCB-217ENST00000484181 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
PCCB-217ENST00000484181 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
PCCB-217ENST00000484181 DIEXFQ68CQ4 756 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms