RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MYO15BQ96JP2 1530 aa12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
CDK5RAP2-216ENST00000483412 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 BECN1Q14457 450 aa12.68□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
CDK5RAP2-216ENST00000483412 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
CDK5RAP2-216ENST00000483412 NAP1L5Q96NT1 182 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP2-216ENST00000483412 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP2-216ENST00000483412 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■■■□□ 16.6
CDK5RAP2-216ENST00000483412 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 WIZO95785 1651 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 CUX2O14529 1486 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.39
CDK5RAP2-216ENST00000483412 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
CDK5RAP2-216ENST00000483412 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SOGA1O94964 1423 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■■■■ 28.7
CDK5RAP2-216ENST00000483412 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
CDK5RAP2-216ENST00000483412 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP2-216ENST00000483412 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
CDK5RAP2-216ENST00000483412 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CDK5RAP2-216ENST00000483412 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
CDK5RAP2-216ENST00000483412 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.42
CDK5RAP2-216ENST00000483412 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
CDK5RAP2-216ENST00000483412 RGS3P49796 1198 aa12.44□□□□□ -0.42
CDK5RAP2-216ENST00000483412 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-216ENST00000483412 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-216ENST00000483412 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
CDK5RAP2-216ENST00000483412 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP2-216ENST00000483412 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP2-216ENST00000483412 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
CDK5RAP2-216ENST00000483412 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP2-216ENST00000483412 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP2-216ENST00000483412 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CDK5RAP2-216ENST00000483412 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP2-216ENST00000483412 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CARMIL2Q6F5E8 1435 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 HSCBQ8IWL3 235 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP2-216ENST00000483412 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CARD11Q9BXL7 1154 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
CDK5RAP2-216ENST00000483412 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP2-216ENST00000483412 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
CDK5RAP2-216ENST00000483412 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 CDCA8Q53HL2 280 aa12.24□□□□□ -0.45
CDK5RAP2-216ENST00000483412 MAPK8IP3Q9UPT6 1336 aa12.24□□□□□ -0.45
CDK5RAP2-216ENST00000483412 CCER2I3L3R5 266 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms