RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MYO15BQ96JP2 1530 aa12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP2-216ENST00000483412 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
CDK5RAP2-216ENST00000483412 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP2-216ENST00000483412 BECN1Q14457 450 aa12.68□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
CDK5RAP2-216ENST00000483412 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
CDK5RAP2-216ENST00000483412 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
CDK5RAP2-216ENST00000483412 NAP1L5Q96NT1 182 aaPredicted RBP12.65□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP2-216ENST00000483412 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP2-216ENST00000483412 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■■■□□ 16.6
CDK5RAP2-216ENST00000483412 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 WIZO95785 1651 aa12.61□□□□□ -0.39
CDK5RAP2-216ENST00000483412 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP2-216ENST00000483412 KCNH8Q96L42 1107 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 CUX2O14529 1486 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
CDK5RAP2-216ENST00000483412 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.39
CDK5RAP2-216ENST00000483412 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
CDK5RAP2-216ENST00000483412 TOP2AP11388 1531 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
CDK5RAP2-216ENST00000483412 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SOGA1O94964 1423 aa12.56□□□□□ -0.4
CDK5RAP2-216ENST00000483412 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■■■■ 28.7
CDK5RAP2-216ENST00000483412 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
CDK5RAP2-216ENST00000483412 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP2-216ENST00000483412 CARMIL1Q5VZK9 1371 aa12.53□□□□□ -0.4
CDK5RAP2-216ENST00000483412 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.4
CDK5RAP2-216ENST00000483412 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CDK5RAP2-216ENST00000483412 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
CDK5RAP2-216ENST00000483412 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP2-216ENST00000483412 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.42
CDK5RAP2-216ENST00000483412 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
CDK5RAP2-216ENST00000483412 RGS3P49796 1198 aa12.44□□□□□ -0.42
CDK5RAP2-216ENST00000483412 RBM19Q9Y4C8 960 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-216ENST00000483412 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP2-216ENST00000483412 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
CDK5RAP2-216ENST00000483412 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP2-216ENST00000483412 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP2-216ENST00000483412 ARID4BQ4LE39 1312 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP2-216ENST00000483412 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP2-216ENST00000483412 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
CDK5RAP2-216ENST00000483412 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP2-216ENST00000483412 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP2-216ENST00000483412 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CDK5RAP2-216ENST00000483412 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP2-216ENST00000483412 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CARMIL2Q6F5E8 1435 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 KNSTRNQ9Y448 316 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 HSCBQ8IWL3 235 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
CDK5RAP2-216ENST00000483412 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP2-216ENST00000483412 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CARD11Q9BXL7 1154 aa12.29□□□□□ -0.44
CDK5RAP2-216ENST00000483412 RAPGEF2Q9Y4G8 1499 aa12.28□□□□□ -0.44
CDK5RAP2-216ENST00000483412 ARID3AQ99856 593 aa12.28□□□□□ -0.44
CDK5RAP2-216ENST00000483412 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP2-216ENST00000483412 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
CDK5RAP2-216ENST00000483412 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP2-216ENST00000483412 CDCA8Q53HL2 280 aa12.24□□□□□ -0.45
CDK5RAP2-216ENST00000483412 MAPK8IP3Q9UPT6 1336 aa12.24□□□□□ -0.45
CDK5RAP2-216ENST00000483412 CCER2I3L3R5 266 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms