RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
PRPF4B-206ENST00000481109 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
PRPF4B-206ENST00000481109 ANP32AP39687 249 aaKnown RBP14.1□□□□□ -0.15
PRPF4B-206ENST00000481109 CENPJQ9HC77 1338 aaPredicted RBP14.08□□□□□ -0.16
PRPF4B-206ENST00000481109 CALD1Q05682 793 aaKnown RBP14.08□□□□□ -0.16
PRPF4B-206ENST00000481109 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
PRPF4B-206ENST00000481109 GSE1Q14687 1217 aa14.06□□□□□ -0.16
PRPF4B-206ENST00000481109 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
PRPF4B-206ENST00000481109 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
PRPF4B-206ENST00000481109 PRDM4Q9UKN5 801 aa14.04□□□□□ -0.16
PRPF4B-206ENST00000481109 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
PRPF4B-206ENST00000481109 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.16
PRPF4B-206ENST00000481109 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.17
PRPF4B-206ENST00000481109 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
PRPF4B-206ENST00000481109 KCNH8Q96L42 1107 aa14□□□□□ -0.17
PRPF4B-206ENST00000481109 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
PRPF4B-206ENST00000481109 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
PRPF4B-206ENST00000481109 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
PRPF4B-206ENST00000481109 EEA1Q15075 1411 aa13.95□□□□□ -0.18
PRPF4B-206ENST00000481109 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
PRPF4B-206ENST00000481109 NAP1L5Q96NT1 182 aaPredicted RBP13.94□□□□□ -0.18
PRPF4B-206ENST00000481109 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
PRPF4B-206ENST00000481109 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
PRPF4B-206ENST00000481109 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
PRPF4B-206ENST00000481109 NACADO15069 1562 aa13.89□□□□□ -0.19
PRPF4B-206ENST00000481109 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
PRPF4B-206ENST00000481109 GTF2E1P29083 439 aaPredicted RBP13.89□□□□□ -0.19
PRPF4B-206ENST00000481109 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
PRPF4B-206ENST00000481109 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
PRPF4B-206ENST00000481109 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
PRPF4B-206ENST00000481109 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
PRPF4B-206ENST00000481109 WIZO95785 1651 aa13.84□□□□□ -0.19
PRPF4B-206ENST00000481109 STAC3Q96MF2 364 aa13.83□□□□□ -0.19
PRPF4B-206ENST00000481109 RRAGDQ9NQL2 400 aaPredicted RBP13.83□□□□□ -0.2
PRPF4B-206ENST00000481109 RGS3P49796 1198 aa13.82□□□□□ -0.2
PRPF4B-206ENST00000481109 CHMP4BQ9H444 224 aaKnown RBP13.82□□□□□ -0.2
PRPF4B-206ENST00000481109 CLCN1P35523 988 aa13.81□□□□□ -0.2
PRPF4B-206ENST00000481109 CNGB1Q14028 1251 aaPredicted RBP13.81□□□□□ -0.2
PRPF4B-206ENST00000481109 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
PRPF4B-206ENST00000481109 PNNQ9H307 717 aaKnown RBP13.81□□□□□ -0.2
PRPF4B-206ENST00000481109 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
PRPF4B-206ENST00000481109 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
PRPF4B-206ENST00000481109 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
PRPF4B-206ENST00000481109 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
PRPF4B-206ENST00000481109 TPM2P07951 284 aa13.75□□□□□ -0.21
PRPF4B-206ENST00000481109 CHRM1P11229 460 aaPredicted RBP13.75□□□□□ -0.21
PRPF4B-206ENST00000481109 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
PRPF4B-206ENST00000481109 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
PRPF4B-206ENST00000481109 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
PRPF4B-206ENST00000481109 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
PRPF4B-206ENST00000481109 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
PRPF4B-206ENST00000481109 FTSJ3Q8IY81 847 aaKnown RBP13.73□□□□□ -0.21
PRPF4B-206ENST00000481109 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
PRPF4B-206ENST00000481109 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
PRPF4B-206ENST00000481109 ARID4BQ4LE39 1312 aaPredicted RBP13.7□□□□□ -0.22
PRPF4B-206ENST00000481109 BCCIPQ9P287 314 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF4B-206ENST00000481109 MAP7D2Q96T17 732 aa13.69□□□□□ -0.22
PRPF4B-206ENST00000481109 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
PRPF4B-206ENST00000481109 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
PRPF4B-206ENST00000481109 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
PRPF4B-206ENST00000481109 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
PRPF4B-206ENST00000481109 L1TD1Q5T7N2 865 aaKnown RBP13.68□□□□□ -0.22
PRPF4B-206ENST00000481109 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
PRPF4B-206ENST00000481109 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
PRPF4B-206ENST00000481109 ANP32CO43423 234 aa13.66□□□□□ -0.22
PRPF4B-206ENST00000481109 CEP162Q5TB80 1403 aa13.66□□□□□ -0.22
PRPF4B-206ENST00000481109 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
PRPF4B-206ENST00000481109 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
PRPF4B-206ENST00000481109 TMEM51Q9NW97 253 aa13.61□□□□□ -0.23
PRPF4B-206ENST00000481109 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-206ENST00000481109 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
PRPF4B-206ENST00000481109 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
PRPF4B-206ENST00000481109 NPM2Q86SE8 214 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-206ENST00000481109 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-206ENST00000481109 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.24
PRPF4B-206ENST00000481109 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
PRPF4B-206ENST00000481109 HNRNPUQ00839 825 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRPF4B-206ENST00000481109 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
PRPF4B-206ENST00000481109 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRPF4B-206ENST00000481109 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
PRPF4B-206ENST00000481109 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
PRPF4B-206ENST00000481109 MS4A1P11836 297 aa13.57□□□□□ -0.24
PRPF4B-206ENST00000481109 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
PRPF4B-206ENST00000481109 TERF1P54274 439 aa13.56□□□□□ -0.24
PRPF4B-206ENST00000481109 DMTNQ08495 405 aa13.55□□□□□ -0.24
PRPF4B-206ENST00000481109 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
PRPF4B-206ENST00000481109 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
PRPF4B-206ENST00000481109 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
PRPF4B-206ENST00000481109 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
PRPF4B-206ENST00000481109 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
PRPF4B-206ENST00000481109 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
PRPF4B-206ENST00000481109 KIF20AO95235 890 aa13.52□□□□□ -0.24
PRPF4B-206ENST00000481109 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
PRPF4B-206ENST00000481109 HSP90B1P14625 803 aaKnown RBP13.52□□□□□ -0.25
PRPF4B-206ENST00000481109 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.25
PRPF4B-206ENST00000481109 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
PRPF4B-206ENST00000481109 PDE4AP27815 886 aa13.51□□□□□ -0.25
PRPF4B-206ENST00000481109 TAF3Q5VWG9 929 aa13.51□□□□□ -0.25
PRPF4B-206ENST00000481109 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
PRPF4B-206ENST00000481109 SOGA1O94964 1423 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms