RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
CACNA1C-225ENST00000480911 SENP3Q9H4L4 574 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-225ENST00000480911 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
CACNA1C-225ENST00000480911 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.4
CACNA1C-225ENST00000480911 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
CACNA1C-225ENST00000480911 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
CACNA1C-225ENST00000480911 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
CACNA1C-225ENST00000480911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
CACNA1C-225ENST00000480911 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-225ENST00000480911 TSPY4P0CV99 314 aa12.47□□□□□ -0.41
CACNA1C-225ENST00000480911 TSPY10P0CW01 314 aa12.47□□□□□ -0.41
CACNA1C-225ENST00000480911 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-225ENST00000480911 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
CACNA1C-225ENST00000480911 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
CACNA1C-225ENST00000480911 MLECQ14165 292 aa12.46□□□□□ -0.41
CACNA1C-225ENST00000480911 MIER1Q8N108 512 aa12.46□□□□□ -0.42
CACNA1C-225ENST00000480911 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
CACNA1C-225ENST00000480911 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
CACNA1C-225ENST00000480911 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
CACNA1C-225ENST00000480911 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
CACNA1C-225ENST00000480911 ARXQ96QS3 562 aa12.43□□□□□ -0.42
CACNA1C-225ENST00000480911 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
CACNA1C-225ENST00000480911 PRM3Q9NNZ6 103 aa12.43□□□□□ -0.42
CACNA1C-225ENST00000480911 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
CACNA1C-225ENST00000480911 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
CACNA1C-225ENST00000480911 ANP32AP39687 249 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-225ENST00000480911 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
CACNA1C-225ENST00000480911 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-225ENST00000480911 DCAF8L1A6NGE4 600 aa12.35□□□□□ -0.43
CACNA1C-225ENST00000480911 CLSTN1O94985 981 aa12.35□□□□□ -0.43
CACNA1C-225ENST00000480911 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
CACNA1C-225ENST00000480911 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
CACNA1C-225ENST00000480911 FKBP8Q14318 412 aa12.33□□□□□ -0.44
CACNA1C-225ENST00000480911 PHF23Q9BUL5 403 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-225ENST00000480911 KRI1Q8N9T8 703 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-225ENST00000480911 LMOD2Q6P5Q4 547 aa12.31□□□□□ -0.44
CACNA1C-225ENST00000480911 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-225ENST00000480911 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-225ENST00000480911 SOGA1O94964 1423 aa12.29□□□□□ -0.44
CACNA1C-225ENST00000480911 FOXD1Q16676 465 aa12.29□□□□□ -0.44
CACNA1C-225ENST00000480911 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
CACNA1C-225ENST00000480911 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-225ENST00000480911 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-225ENST00000480911 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
CACNA1C-225ENST00000480911 TRIM44Q96DX7 344 aaPredicted RBP12.25□□□□□ -0.45
CACNA1C-225ENST00000480911 SETD5Q9C0A6 1442 aa12.25□□□□□ -0.45
CACNA1C-225ENST00000480911 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
CACNA1C-225ENST00000480911 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
CACNA1C-225ENST00000480911 NPHP1O15259 732 aa12.24□□□□□ -0.45
CACNA1C-225ENST00000480911 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-225ENST00000480911 HNRNPUQ00839 825 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1C-225ENST00000480911 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-225ENST00000480911 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
CACNA1C-225ENST00000480911 CCDC9Q9Y3X0 531 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-225ENST00000480911 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-225ENST00000480911 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
CACNA1C-225ENST00000480911 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
CACNA1C-225ENST00000480911 KIF21BO75037 1637 aa12.19□□□□□ -0.46
CACNA1C-225ENST00000480911 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
CACNA1C-225ENST00000480911 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-225ENST00000480911 KANK1Q14678 1352 aa12.17□□□□□ -0.46
CACNA1C-225ENST00000480911 CHIC2Q9UKJ5 165 aa12.17□□□□□ -0.46
CACNA1C-225ENST00000480911 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
CACNA1C-225ENST00000480911 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-225ENST00000480911 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
CACNA1C-225ENST00000480911 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-225ENST00000480911 FMN1Q68DA7 1419 aa12.15□□□□□ -0.46
CACNA1C-225ENST00000480911 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
CACNA1C-225ENST00000480911 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-225ENST00000480911 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
CACNA1C-225ENST00000480911 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-225ENST00000480911 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
CACNA1C-225ENST00000480911 WIZO95785 1651 aa12.12□□□□□ -0.47
CACNA1C-225ENST00000480911 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
CACNA1C-225ENST00000480911 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
CACNA1C-225ENST00000480911 CCDC136Q96JN2 1154 aa12.11□□□□□ -0.47
CACNA1C-225ENST00000480911 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-225ENST00000480911 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
CACNA1C-225ENST00000480911 RRBP1Q9P2E9 1410 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-225ENST00000480911 GGT6Q6P531 493 aa12.1□□□□□ -0.47
CACNA1C-225ENST00000480911 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
CACNA1C-225ENST00000480911 POGKQ9P215 609 aa12.09□□□□□ -0.47
CACNA1C-225ENST00000480911 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
CACNA1C-225ENST00000480911 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
CACNA1C-225ENST00000480911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNA1C-225ENST00000480911 PTMAP06454 111 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-225ENST00000480911 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
CACNA1C-225ENST00000480911 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
CACNA1C-225ENST00000480911 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-225ENST00000480911 CUX2O14529 1486 aa12.07□□□□□ -0.48
CACNA1C-225ENST00000480911 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
CACNA1C-225ENST00000480911 FANCIQ9NVI1 1328 aa12.06□□□□□ -0.48
CACNA1C-225ENST00000480911 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-225ENST00000480911 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
CACNA1C-225ENST00000480911 NBR1Q14596 966 aa12.06□□□□□ -0.48
CACNA1C-225ENST00000480911 ROCK2O75116 1388 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-225ENST00000480911 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-225ENST00000480911 TMC1Q8TDI8 760 aa12.04□□□□□ -0.48
CACNA1C-225ENST00000480911 PDE4CQ08493 712 aa12.03□□□□□ -0.48
CACNA1C-225ENST00000480911 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms