RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ABCC10Q5T3U5 1492 aa31.46■■■□□ 2.63
HMGN1-212ENST00000479586 RUSC2Q8N2Y8 1516 aa31.4■■■□□ 2.62
HMGN1-212ENST00000479586 SUPT5HO00267 1087 aaKnown RBP31.39■■■□□ 2.62
HMGN1-212ENST00000479586 MAPKBP1O60336 1514 aa31.39■■■□□ 2.61
HMGN1-212ENST00000479586 DIP2BQ9P265 1576 aa31.39■■■□□ 2.61
HMGN1-212ENST00000479586 NPM1P06748 294 aaKnown RBP eCLIP31.35■■■□□ 2.61
HMGN1-212ENST00000479586 ADCY10Q96PN6 1610 aa31.35■■■□□ 2.61
HMGN1-212ENST00000479586 KDM4FA0A1W2PPD8 638 aa31.29■■■□□ 2.6
HMGN1-212ENST00000479586 KDM6BO15054 1643 aa31.28■■■□□ 2.6
HMGN1-212ENST00000479586 TSPOAP1O95153 1857 aa31.21■■■□□ 2.59
HMGN1-212ENST00000479586 KIAA0586Q9BVV6 1533 aa31.13■■■□□ 2.57
HMGN1-212ENST00000479586 ILDR1Q86SU0 546 aaPredicted RBP31.03■■■□□ 2.56
HMGN1-212ENST00000479586 IGF1RP08069 1367 aa31.01■■■□□ 2.55
HMGN1-212ENST00000479586 PTPRGP23470 1445 aa30.98■■■□□ 2.55
HMGN1-212ENST00000479586 CUL7Q14999 1698 aa30.97■■■□□ 2.55
HMGN1-212ENST00000479586 TTBK1Q5TCY1 1321 aaPredicted RBP30.95■■■□□ 2.54
HMGN1-212ENST00000479586 PPRC1Q5VV67 1664 aaKnown RBP30.93■■■□□ 2.54
HMGN1-212ENST00000479586 ABCC2Q92887 1545 aa30.92■■■□□ 2.54
HMGN1-212ENST00000479586 KIF27Q86VH2 1401 aa30.91■■■□□ 2.54
HMGN1-212ENST00000479586 ASXL2Q76L83 1435 aa30.9■■■□□ 2.54
HMGN1-212ENST00000479586 ADGRL1O94910 1474 aa30.89■■■□□ 2.53
HMGN1-212ENST00000479586 TNIKQ9UKE5 1360 aa30.86■■■□□ 2.53
HMGN1-212ENST00000479586 GLI2P10070 1586 aa30.86■■■□□ 2.53
HMGN1-212ENST00000479586 PLB1Q6P1J6 1458 aa30.85■■■□□ 2.53
HMGN1-212ENST00000479586 CARMIL2Q6F5E8 1435 aa30.82■■■□□ 2.52
HMGN1-212ENST00000479586 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
HMGN1-212ENST00000479586 UHRF1BP1LA0JNW5 1464 aa30.77■■■□□ 2.52
HMGN1-212ENST00000479586 COL17A1Q9UMD9 1497 aaPredicted RBP30.77■■■□□ 2.52
HMGN1-212ENST00000479586 IQGAP2Q13576 1575 aa30.75■■■□□ 2.51
HMGN1-212ENST00000479586 UACAQ9BZF9 1416 aa30.72■■■□□ 2.51
HMGN1-212ENST00000479586 EPRSP07814 1512 aaKnown RBP30.7■■■□□ 2.51
HMGN1-212ENST00000479586 MAP3K4Q9Y6R4 1608 aa30.69■■■□□ 2.5
HMGN1-212ENST00000479586 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
HMGN1-212ENST00000479586 DISP1Q96F81 1524 aa30.68■■■□□ 2.5
HMGN1-212ENST00000479586 KDM5BQ9UGL1 1544 aa30.64■■■□□ 2.5
HMGN1-212ENST00000479586 TEX14Q8IWB6 1497 aa30.62■■■□□ 2.49
HMGN1-212ENST00000479586 ZCCHC11Q5TAX3 1644 aaKnown RBP30.61■■■□□ 2.49
HMGN1-212ENST00000479586 UGGT2Q9NYU1 1516 aa30.52■■■□□ 2.48
HMGN1-212ENST00000479586 KIAA0556O60303 1618 aa30.49■■■□□ 2.47
HMGN1-212ENST00000479586 WDR7Q9Y4E6 1490 aa30.47■■■□□ 2.47
HMGN1-212ENST00000479586 RAPGEF2Q9Y4G8 1499 aa30.42■■■□□ 2.46
HMGN1-212ENST00000479586 MAGI3Q5TCQ9 1506 aa30.36■■■□□ 2.45
HMGN1-212ENST00000479586 CD109Q6YHK3 1445 aa30.35■■■□□ 2.45
HMGN1-212ENST00000479586 CFAP43Q8NDM7 1665 aa30.33■■■□□ 2.45
HMGN1-212ENST00000479586 KIF21BO75037 1637 aa30.29■■■□□ 2.44
HMGN1-212ENST00000479586 KCNH8Q96L42 1107 aa30.29■■■□□ 2.44
HMGN1-212ENST00000479586 ABCA8O94911 1581 aa30.26■■■□□ 2.43
HMGN1-212ENST00000479586 CTTNBP2Q8WZ74 1663 aa30.23■■■□□ 2.43
HMGN1-212ENST00000479586 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
HMGN1-212ENST00000479586 FBXO41Q8TF61 875 aa30.17■■■□□ 2.42
HMGN1-212ENST00000479586 ARAP3Q8WWN8 1544 aa30.14■■■□□ 2.42
HMGN1-212ENST00000479586 PTPRMP28827 1452 aa30.07■■■□□ 2.4
HMGN1-212ENST00000479586 ARID3CA6NKF2 412 aa30.06■■■□□ 2.4
HMGN1-212ENST00000479586 ADAMTSL3P82987 1691 aa30.06■■■□□ 2.4
HMGN1-212ENST00000479586 ATP10BO94823 1461 aa29.99■■■□□ 2.39
HMGN1-212ENST00000479586 ABCA9Q8IUA7 1624 aa29.99■■■□□ 2.39
HMGN1-212ENST00000479586 RAPGEF3O95398 923 aa29.96■■■□□ 2.39
HMGN1-212ENST00000479586 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
HMGN1-212ENST00000479586 PHLDB1Q86UU1 1377 aa29.94■■■□□ 2.38
HMGN1-212ENST00000479586 BCORL1Q5H9F3 1711 aa29.93■■■□□ 2.38
HMGN1-212ENST00000479586 PCF11O94913 1555 aaKnown RBP29.92■■■□□ 2.38
HMGN1-212ENST00000479586 P3H3Q8IVL6 736 aa29.92■■■□□ 2.38
HMGN1-212ENST00000479586 MADDQ8WXG6 1647 aa29.92■■■□□ 2.38
HMGN1-212ENST00000479586 FRMPD1Q5SYB0 1578 aa29.9■■■□□ 2.38
HMGN1-212ENST00000479586 NEO1Q92859 1461 aa29.88■■■□□ 2.37
HMGN1-212ENST00000479586 LMTK3Q96Q04 1460 aa29.88■■■□□ 2.37
HMGN1-212ENST00000479586 ARID4BQ4LE39 1312 aaPredicted RBP29.85■■■□□ 2.37
HMGN1-212ENST00000479586 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
HMGN1-212ENST00000479586 RAPGEF6Q8TEU7 1601 aa29.79■■■□□ 2.36
HMGN1-212ENST00000479586 RIMS1Q86UR5 1692 aaKnown RBP29.79■■■□□ 2.36
HMGN1-212ENST00000479586 SAMD9Q5K651 1589 aa29.77■■■□□ 2.36
HMGN1-212ENST00000479586 ARHGEF40Q8TER5 1519 aa29.76■■■□□ 2.36
HMGN1-212ENST00000479586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.74■■■□□ 2.35
HMGN1-212ENST00000479586 HNRNPUL2Q1KMD3 747 aaKnown RBP29.74■■■□□ 2.35
HMGN1-212ENST00000479586 NUP153P49790 1475 aaKnown RBP29.7■■■□□ 2.35
HMGN1-212ENST00000479586 HSPA2P54652 639 aa29.7■■■□□ 2.35
HMGN1-212ENST00000479586 RICTORQ6R327 1708 aa29.7■■■□□ 2.34
HMGN1-212ENST00000479586 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
HMGN1-212ENST00000479586 PLPPR3Q6T4P5 718 aa29.65■■■□□ 2.34
HMGN1-212ENST00000479586 FHOD3Q2V2M9 1422 aa29.63■■■□□ 2.33
HMGN1-212ENST00000479586 AKNAQ7Z591 1439 aa29.62■■■□□ 2.33
HMGN1-212ENST00000479586 SIGLEC1Q9BZZ2 1709 aa29.62■■■□□ 2.33
HMGN1-212ENST00000479586 FANCAO15360 1455 aa29.6■■■□□ 2.33
HMGN1-212ENST00000479586 CFAP74Q9C0B2 1584 aa29.57■■■□□ 2.32
HMGN1-212ENST00000479586 ZMYM4Q5VZL5 1548 aa29.57■■■□□ 2.32
HMGN1-212ENST00000479586 POGZQ7Z3K3 1410 aa29.57■■■□□ 2.32
HMGN1-212ENST00000479586 YEATS2Q9ULM3 1422 aa29.56■■■□□ 2.32
HMGN1-212ENST00000479586 CERKQ8TCT0 537 aa29.56■■■□□ 2.32
HMGN1-212ENST00000479586 ZFYVE16Q7Z3T8 1539 aa29.55■■■□□ 2.32
HMGN1-212ENST00000479586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.322e-6■■■□□ 17.3
HMGN1-212ENST00000479586 PLEKHD1A6NEE1 506 aa29.54■■■□□ 2.32
HMGN1-212ENST00000479586 TTC37Q6PGP7 1564 aa29.53■■■□□ 2.32
HMGN1-212ENST00000479586 RANGAP1P46060 587 aaPredicted RBP29.53■■■□□ 2.32
HMGN1-212ENST00000479586 EFCAB5A4FU69 1503 aa29.52■■■□□ 2.32
HMGN1-212ENST00000479586 CSRNP3Q8WYN3 585 aa29.51■■■□□ 2.31
HMGN1-212ENST00000479586 MLECQ14165 292 aa29.49■■■□□ 2.31
HMGN1-212ENST00000479586 FER1L4A9Z1Z3 1794 aa29.49■■■□□ 2.31
HMGN1-212ENST00000479586 HECW1Q76N89 1606 aa29.47■■■□□ 2.31
HMGN1-212ENST00000479586 MAGI2Q86UL8 1455 aa29.46■■■□□ 2.31
HMGN1-212ENST00000479586 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms