RNA–Protein interactions for RNA: ENST00000478974.1

ITGB8-204, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 2,054 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-204ENST00000478974 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
ITGB8-204ENST00000478974 P3H3Q8IVL6 736 aa37.94■■■■□ 3.66
ITGB8-204ENST00000478974 KANK4Q5T7N3 995 aaPredicted RBP37.91■■■■□ 3.66
ITGB8-204ENST00000478974 GRIN2BQ13224 1484 aa37.9■■■■□ 3.66
ITGB8-204ENST00000478974 FHAD1B1AJZ9 1412 aa37.86■■■■□ 3.65
ITGB8-204ENST00000478974 ADAMTS12P58397 1594 aa37.85■■■■□ 3.65
ITGB8-204ENST00000478974 FHOD3Q2V2M9 1422 aa37.82■■■■□ 3.65
ITGB8-204ENST00000478974 EFCAB5A4FU69 1503 aa37.81■■■■□ 3.64
ITGB8-204ENST00000478974 EIF4G3O43432 1585 aaKnown RBP37.78■■■■□ 3.64
ITGB8-204ENST00000478974 PCF11O94913 1555 aaKnown RBP37.68■■■■□ 3.62
ITGB8-204ENST00000478974 SNAPC4Q5SXM2 1469 aa37.68■■■■□ 3.62
ITGB8-204ENST00000478974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.68■■■■□ 3.62
ITGB8-204ENST00000478974 SAMD9Q5K651 1589 aa37.67■■■■□ 3.62
ITGB8-204ENST00000478974 TIAM1Q13009 1591 aa37.65■■■■□ 3.62
ITGB8-204ENST00000478974 MAP3K1Q13233 1512 aa37.61■■■■□ 3.61
ITGB8-204ENST00000478974 ZEB1P37275 1124 aaPredicted RBP37.59■■■■□ 3.61
ITGB8-204ENST00000478974 HNRNPUL2Q1KMD3 747 aaKnown RBP37.59■■■■□ 3.61
ITGB8-204ENST00000478974 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
ITGB8-204ENST00000478974 CASKIN1Q8WXD9 1431 aa37.54■■■■□ 3.6
ITGB8-204ENST00000478974 IQGAP2Q13576 1575 aa37.54■■■■□ 3.6
ITGB8-204ENST00000478974 FYCO1Q9BQS8 1478 aa37.53■■■■□ 3.6
ITGB8-204ENST00000478974 FMN1Q68DA7 1419 aa37.51■■■■□ 3.6
ITGB8-204ENST00000478974 CFAP43Q8NDM7 1665 aa37.49■■■■□ 3.59
ITGB8-204ENST00000478974 CCER1Q8TC90 406 aaPredicted RBP37.49■■■■□ 3.59
ITGB8-204ENST00000478974 LRRC9Q6ZRR7 1453 aa37.49■■■■□ 3.59
ITGB8-204ENST00000478974 GRIN2AQ12879 1464 aa37.48■■■■□ 3.59
ITGB8-204ENST00000478974 MAGI1Q96QZ7 1491 aaPredicted RBP37.47■■■■□ 3.59
ITGB8-204ENST00000478974 RRBP1Q9P2E9 1410 aaKnown RBP37.42■■■■□ 3.58
ITGB8-204ENST00000478974 KIAA0586Q9BVV6 1533 aa37.38■■■■□ 3.57
ITGB8-204ENST00000478974 SYNJ2O15056 1496 aa37.38■■■■□ 3.57
ITGB8-204ENST00000478974 CHMP7Q8WUX9 453 aaPredicted RBP37.37■■■■□ 3.57
ITGB8-204ENST00000478974 UGGT2Q9NYU1 1516 aa37.35■■■■□ 3.57
ITGB8-204ENST00000478974 LRRIQ1Q96JM4 1722 aa37.34■■■■□ 3.57
ITGB8-204ENST00000478974 FBLN2P98095 1184 aa37.32■■■■□ 3.57
ITGB8-204ENST00000478974 CEP170Q5SW79 1584 aa37.29■■■■□ 3.56
ITGB8-204ENST00000478974 CCNB3Q8WWL7 1395 aa37.29■■■■□ 3.56
ITGB8-204ENST00000478974 PHLDB1Q86UU1 1377 aa37.27■■■■□ 3.56
ITGB8-204ENST00000478974 DISP1Q96F81 1524 aa37.22■■■■□ 3.55
ITGB8-204ENST00000478974 KIAA0556O60303 1618 aa37.17■■■■□ 3.54
ITGB8-204ENST00000478974 NUP160Q12769 1436 aa37.15■■■■□ 3.54
ITGB8-204ENST00000478974 MTUS2Q5JR59 1369 aa37.09■■■■□ 3.53
ITGB8-204ENST00000478974 ITGAEP38570 1179 aa37.08■■■■□ 3.53
ITGB8-204ENST00000478974 HECW1Q76N89 1606 aa37.06■■■■□ 3.52
ITGB8-204ENST00000478974 MAGI3Q5TCQ9 1506 aa37.02■■■■□ 3.52
ITGB8-204ENST00000478974 CCDC18Q5T9S5 1454 aa37.01■■■■□ 3.52
ITGB8-204ENST00000478974 EPRSP07814 1512 aaKnown RBP37.01■■■■□ 3.52
ITGB8-204ENST00000478974 JPH4Q96JJ6 628 aa37.01■■■■□ 3.52
ITGB8-204ENST00000478974 FAM50AQ14320 339 aaKnown RBP36.98■■■■□ 3.51
ITGB8-204ENST00000478974 CDK13Q14004 1512 aaKnown RBP36.97■■■■□ 3.51
ITGB8-204ENST00000478974 ARID3CA6NKF2 412 aa36.97■■■■□ 3.51
ITGB8-204ENST00000478974 EHBP1L1Q8N3D4 1523 aa36.94■■■■□ 3.5
ITGB8-204ENST00000478974 NCOA2Q15596 1464 aa36.93■■■■□ 3.5
ITGB8-204ENST00000478974 CHD1O14646 1710 aa36.91■■■■□ 3.5
ITGB8-204ENST00000478974 SUPT6HQ7KZ85 1726 aaKnown RBP36.9■■■■□ 3.5
ITGB8-204ENST00000478974 FGD6Q6ZV73 1430 aa36.88■■■■□ 3.49
ITGB8-204ENST00000478974 RAPGEF6Q8TEU7 1601 aa36.88■■■■□ 3.49
ITGB8-204ENST00000478974 NUP153P49790 1475 aaKnown RBP36.86■■■■□ 3.49
ITGB8-204ENST00000478974 CARMIL2Q6F5E8 1435 aa36.85■■■■□ 3.49
ITGB8-204ENST00000478974 ARHGEF11O15085 1522 aa36.82■■■■□ 3.49
ITGB8-204ENST00000478974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.8■■■■□ 3.48
ITGB8-204ENST00000478974 DHX57Q6P158 1386 aaKnown RBP36.8■■■■□ 3.48
ITGB8-204ENST00000478974 PLB1Q6P1J6 1458 aa36.79■■■■□ 3.48
ITGB8-204ENST00000478974 MYOM3Q5VTT5 1437 aa36.79■■■■□ 3.48
ITGB8-204ENST00000478974 RAB3GAP2Q9H2M9 1393 aa36.72■■■■□ 3.47
ITGB8-204ENST00000478974 PRG4Q92954 1404 aaPredicted RBP36.69■■■■□ 3.46
ITGB8-204ENST00000478974 SETD5Q9C0A6 1442 aa36.68■■■■□ 3.46
ITGB8-204ENST00000478974 PTPN23Q9H3S7 1636 aa36.64■■■■□ 3.46
ITGB8-204ENST00000478974 PTPRKQ15262 1439 aa36.62■■■■□ 3.45
ITGB8-204ENST00000478974 ABCA8O94911 1581 aa36.6■■■■□ 3.45
ITGB8-204ENST00000478974 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
ITGB8-204ENST00000478974 CLSPNQ9HAW4 1339 aa36.56■■■■□ 3.44
ITGB8-204ENST00000478974 CDK11AQ9UQ88 783 aaPredicted RBP36.55■■■■□ 3.44
ITGB8-204ENST00000478974 TCOF1Q13428 1488 aaKnown RBP36.53■■■■□ 3.44
ITGB8-204ENST00000478974 PTPRGP23470 1445 aa36.51■■■■□ 3.44
ITGB8-204ENST00000478974 TROQ12816 1431 aaPredicted RBP36.49■■■■□ 3.43
ITGB8-204ENST00000478974 MIA2Q96PC5 1412 aa36.48■■■■□ 3.43
ITGB8-204ENST00000478974 ERCC6L2Q5T890 1561 aa36.47■■■■□ 3.43
ITGB8-204ENST00000478974 ATP10BO94823 1461 aa36.46■■■■□ 3.43
ITGB8-204ENST00000478974 CLASP1Q7Z460 1538 aa36.4■■■■□ 3.42
ITGB8-204ENST00000478974 KIF14Q15058 1648 aa36.4■■■■□ 3.42
ITGB8-204ENST00000478974 MAPKBP1O60336 1514 aa36.39■■■■□ 3.42
ITGB8-204ENST00000478974 HFM1A2PYH4 1435 aa36.37■■■■□ 3.41
ITGB8-204ENST00000478974 ADCY10Q96PN6 1610 aa36.36■■■■□ 3.41
ITGB8-204ENST00000478974 NAIPQ13075 1403 aa36.33■■■■□ 3.41
ITGB8-204ENST00000478974 ZNF644Q9H582 1327 aaPredicted RBP36.33■■■■□ 3.41
ITGB8-204ENST00000478974 CHIC2Q9UKJ5 165 aa36.33■■■■□ 3.41
ITGB8-204ENST00000478974 PLEKHD1A6NEE1 506 aa36.31■■■■□ 3.4
ITGB8-204ENST00000478974 UACAQ9BZF9 1416 aa36.29■■■■□ 3.4
ITGB8-204ENST00000478974 GPATCH8Q9UKJ3 1502 aaKnown RBP36.27■■■■□ 3.4
ITGB8-204ENST00000478974 RRP7BPQ9NSQ0 103 aa36.26■■■■□ 3.4
ITGB8-204ENST00000478974 ITSN2Q9NZM3 1697 aa36.21■■■■□ 3.39
ITGB8-204ENST00000478974 CFDP1Q9UEE9 299 aaPredicted RBP36.2■■■■□ 3.39
ITGB8-204ENST00000478974 DAPK1P53355 1430 aa36.19■■■■□ 3.38
ITGB8-204ENST00000478974 ABCC10Q5T3U5 1492 aa36.19■■■■□ 3.38
ITGB8-204ENST00000478974 ABCC5O15440 1437 aa36.18■■■■□ 3.38
ITGB8-204ENST00000478974 DNMT1P26358 1616 aaKnown RBP36.17■■■■□ 3.38
ITGB8-204ENST00000478974 ZNF316A6NFI3 1004 aaPredicted RBP36.17■■■■□ 3.38
ITGB8-204ENST00000478974 GCC2Q8IWJ2 1684 aa36.15■■■■□ 3.38
ITGB8-204ENST00000478974 CAMSAP2Q08AD1 1489 aa36.15■■■■□ 3.38
ITGB8-204ENST00000478974 CDC42BPAQ5VT25 1732 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms