RNA–Protein interactions for RNA: ENST00000478722.5

GPHN-203, Transcript of gephyrin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPHN, Length 4,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-203ENST00000478722 WIZO95785 1651 aa18.07■□□□□ 0.48
GPHN-203ENST00000478722 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
GPHN-203ENST00000478722 CUX2O14529 1486 aa18.05■□□□□ 0.48
GPHN-203ENST00000478722 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
GPHN-203ENST00000478722 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
GPHN-203ENST00000478722 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
GPHN-203ENST00000478722 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
GPHN-203ENST00000478722 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
GPHN-203ENST00000478722 VPS8Q8N3P4 1428 aa18.02■□□□□ 0.48
GPHN-203ENST00000478722 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.47
GPHN-203ENST00000478722 KCNH8Q96L42 1107 aa18■□□□□ 0.47
GPHN-203ENST00000478722 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
GPHN-203ENST00000478722 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
GPHN-203ENST00000478722 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
GPHN-203ENST00000478722 NEFMP07197 916 aa17.97■□□□□ 0.47
GPHN-203ENST00000478722 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
GPHN-203ENST00000478722 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
GPHN-203ENST00000478722 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
GPHN-203ENST00000478722 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
GPHN-203ENST00000478722 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
GPHN-203ENST00000478722 ZBTB47Q9UFB7 747 aaPredicted RBP17.92■□□□□ 0.46
GPHN-203ENST00000478722 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
GPHN-203ENST00000478722 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
GPHN-203ENST00000478722 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
GPHN-203ENST00000478722 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
GPHN-203ENST00000478722 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
GPHN-203ENST00000478722 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
GPHN-203ENST00000478722 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.44
GPHN-203ENST00000478722 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
GPHN-203ENST00000478722 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
GPHN-203ENST00000478722 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
GPHN-203ENST00000478722 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
GPHN-203ENST00000478722 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
GPHN-203ENST00000478722 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
GPHN-203ENST00000478722 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
GPHN-203ENST00000478722 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
GPHN-203ENST00000478722 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
GPHN-203ENST00000478722 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
GPHN-203ENST00000478722 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
GPHN-203ENST00000478722 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
GPHN-203ENST00000478722 FOXD1Q16676 465 aa17.73■□□□□ 0.43
GPHN-203ENST00000478722 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
GPHN-203ENST00000478722 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
GPHN-203ENST00000478722 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
GPHN-203ENST00000478722 NBR1Q14596 966 aa17.67■□□□□ 0.42
GPHN-203ENST00000478722 DCAF11Q8TEB1 546 aa17.67■□□□□ 0.42
GPHN-203ENST00000478722 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
GPHN-203ENST00000478722 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
GPHN-203ENST00000478722 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
GPHN-203ENST00000478722 FMN1Q68DA7 1419 aa17.64■□□□□ 0.41
GPHN-203ENST00000478722 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
GPHN-203ENST00000478722 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
GPHN-203ENST00000478722 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
GPHN-203ENST00000478722 PKD2Q13563 968 aa17.61■□□□□ 0.41
GPHN-203ENST00000478722 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
GPHN-203ENST00000478722 CCER2I3L3R5 266 aa17.58■□□□□ 0.41
GPHN-203ENST00000478722 CDCA8Q53HL2 280 aa17.58■□□□□ 0.41
GPHN-203ENST00000478722 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
GPHN-203ENST00000478722 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
GPHN-203ENST00000478722 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
GPHN-203ENST00000478722 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
GPHN-203ENST00000478722 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
GPHN-203ENST00000478722 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
GPHN-203ENST00000478722 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.4
GPHN-203ENST00000478722 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
GPHN-203ENST00000478722 NUP155O75694 1391 aa17.48■□□□□ 0.39
GPHN-203ENST00000478722 IGF1RP08069 1367 aa17.48■□□□□ 0.39
GPHN-203ENST00000478722 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
GPHN-203ENST00000478722 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
GPHN-203ENST00000478722 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
GPHN-203ENST00000478722 TMF1P82094 1093 aa17.47■□□□□ 0.39
GPHN-203ENST00000478722 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
GPHN-203ENST00000478722 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
GPHN-203ENST00000478722 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■■■■ 30.7
GPHN-203ENST00000478722 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
GPHN-203ENST00000478722 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
GPHN-203ENST00000478722 ARXQ96QS3 562 aa17.4■□□□□ 0.38
GPHN-203ENST00000478722 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.38
GPHN-203ENST00000478722 POGKQ9P215 609 aa17.39■□□□□ 0.37
GPHN-203ENST00000478722 GGT6Q6P531 493 aa17.38■□□□□ 0.37
GPHN-203ENST00000478722 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
GPHN-203ENST00000478722 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
GPHN-203ENST00000478722 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
GPHN-203ENST00000478722 RGS3P49796 1198 aa17.37■□□□□ 0.37
GPHN-203ENST00000478722 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
GPHN-203ENST00000478722 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
GPHN-203ENST00000478722 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
GPHN-203ENST00000478722 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
GPHN-203ENST00000478722 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
GPHN-203ENST00000478722 KANK1Q14678 1352 aa17.34■□□□□ 0.37
GPHN-203ENST00000478722 ROCK2O75116 1388 aaKnown RBP17.33■□□□□ 0.37
GPHN-203ENST00000478722 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
GPHN-203ENST00000478722 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
GPHN-203ENST00000478722 KIF21BO75037 1637 aa17.33■□□□□ 0.36
GPHN-203ENST00000478722 CCDC18Q5T9S5 1454 aa17.33■□□□□ 0.36
GPHN-203ENST00000478722 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
GPHN-203ENST00000478722 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
GPHN-203ENST00000478722 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
GPHN-203ENST00000478722 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
GPHN-203ENST00000478722 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms