RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
FBXO42-204ENST00000478089 ARID3AQ99856 593 aa11.76□□□□□ -0.53
FBXO42-204ENST00000478089 IGSF3O75054 1194 aa11.75□□□□□ -0.53
FBXO42-204ENST00000478089 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
FBXO42-204ENST00000478089 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
FBXO42-204ENST00000478089 RGL2O15211 777 aa11.75□□□□□ -0.53
FBXO42-204ENST00000478089 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
FBXO42-204ENST00000478089 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
FBXO42-204ENST00000478089 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
FBXO42-204ENST00000478089 BRD2P25440 801 aaKnown RBP11.71□□□□□ -0.53
FBXO42-204ENST00000478089 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
FBXO42-204ENST00000478089 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
FBXO42-204ENST00000478089 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
FBXO42-204ENST00000478089 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
FBXO42-204ENST00000478089 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
FBXO42-204ENST00000478089 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.54
FBXO42-204ENST00000478089 FGD1P98174 961 aa11.64□□□□□ -0.55
FBXO42-204ENST00000478089 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
FBXO42-204ENST00000478089 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
FBXO42-204ENST00000478089 CDK11AQ9UQ88 783 aaPredicted RBP11.63□□□□□ -0.55
FBXO42-204ENST00000478089 ZMYND15Q9H091 742 aa11.61□□□□□ -0.55
FBXO42-204ENST00000478089 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
FBXO42-204ENST00000478089 PROM2Q8N271 834 aa11.6□□□□□ -0.55
FBXO42-204ENST00000478089 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
FBXO42-204ENST00000478089 WIZO95785 1651 aa11.6□□□□□ -0.55
FBXO42-204ENST00000478089 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
FBXO42-204ENST00000478089 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
FBXO42-204ENST00000478089 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
FBXO42-204ENST00000478089 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
FBXO42-204ENST00000478089 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
FBXO42-204ENST00000478089 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
FBXO42-204ENST00000478089 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
FBXO42-204ENST00000478089 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
FBXO42-204ENST00000478089 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
FBXO42-204ENST00000478089 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
FBXO42-204ENST00000478089 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
FBXO42-204ENST00000478089 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
FBXO42-204ENST00000478089 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
FBXO42-204ENST00000478089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
FBXO42-204ENST00000478089 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
FBXO42-204ENST00000478089 CUX2O14529 1486 aa11.47□□□□□ -0.57
FBXO42-204ENST00000478089 HSP90B1P14625 803 aaKnown RBP11.46□□□□□ -0.57
FBXO42-204ENST00000478089 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
FBXO42-204ENST00000478089 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
FBXO42-204ENST00000478089 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
FBXO42-204ENST00000478089 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
FBXO42-204ENST00000478089 ZNF428Q96B54 188 aa11.39□□□□□ -0.59
FBXO42-204ENST00000478089 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
FBXO42-204ENST00000478089 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
FBXO42-204ENST00000478089 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
FBXO42-204ENST00000478089 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
FBXO42-204ENST00000478089 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
FBXO42-204ENST00000478089 AAMPQ13685 434 aa11.36□□□□□ -0.59
FBXO42-204ENST00000478089 APBB1O00213 710 aa11.35□□□□□ -0.59
FBXO42-204ENST00000478089 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
FBXO42-204ENST00000478089 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
FBXO42-204ENST00000478089 RAD21O60216 631 aa11.34□□□□□ -0.59
FBXO42-204ENST00000478089 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
FBXO42-204ENST00000478089 HMGB1P09429 215 aaKnown RBP11.33□□□□□ -0.6
FBXO42-204ENST00000478089 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
FBXO42-204ENST00000478089 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
FBXO42-204ENST00000478089 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
FBXO42-204ENST00000478089 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
FBXO42-204ENST00000478089 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
FBXO42-204ENST00000478089 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
FBXO42-204ENST00000478089 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
FBXO42-204ENST00000478089 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
FBXO42-204ENST00000478089 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
FBXO42-204ENST00000478089 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
FBXO42-204ENST00000478089 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.61
FBXO42-204ENST00000478089 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
FBXO42-204ENST00000478089 FOXD4L5Q5VV16 416 aaPredicted RBP11.25□□□□□ -0.61
FBXO42-204ENST00000478089 FOXD4L4Q8WXT5 416 aaPredicted RBP11.25□□□□□ -0.61
FBXO42-204ENST00000478089 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
FBXO42-204ENST00000478089 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
FBXO42-204ENST00000478089 ERICH6BQ5W0A0 696 aa11.24□□□□□ -0.61
FBXO42-204ENST00000478089 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
FBXO42-204ENST00000478089 NAP1L5Q96NT1 182 aaPredicted RBP11.22□□□□□ -0.61
FBXO42-204ENST00000478089 RBM25P49756 843 aaKnown RBP11.22□□□□□ -0.61
FBXO42-204ENST00000478089 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
FBXO42-204ENST00000478089 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
FBXO42-204ENST00000478089 ABCC8Q09428 1581 aa11.21□□□□□ -0.62
FBXO42-204ENST00000478089 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
FBXO42-204ENST00000478089 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
FBXO42-204ENST00000478089 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
FBXO42-204ENST00000478089 RBM10P98175 930 aaKnown RBP11.19□□□□□ -0.62
FBXO42-204ENST00000478089 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
FBXO42-204ENST00000478089 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
FBXO42-204ENST00000478089 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
FBXO42-204ENST00000478089 P3H3Q8IVL6 736 aa11.17□□□□□ -0.62
FBXO42-204ENST00000478089 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
FBXO42-204ENST00000478089 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
FBXO42-204ENST00000478089 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
FBXO42-204ENST00000478089 PCGF6Q9BYE7 350 aa11.13□□□□□ -0.63
FBXO42-204ENST00000478089 EEA1Q15075 1411 aa11.12□□□□□ -0.63
FBXO42-204ENST00000478089 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
FBXO42-204ENST00000478089 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
FBXO42-204ENST00000478089 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
FBXO42-204ENST00000478089 ACIN1Q9UKV3 1341 aaKnown RBP11.09□□□□□ -0.63
FBXO42-204ENST00000478089 TRAIPQ9BWF2 469 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms