RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
CNTN3-202ENST00000477856 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
CNTN3-202ENST00000477856 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
CNTN3-202ENST00000477856 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
CNTN3-202ENST00000477856 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
CNTN3-202ENST00000477856 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
CNTN3-202ENST00000477856 ST18O60284 1047 aa9.84□□□□□ -0.83
CNTN3-202ENST00000477856 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
CNTN3-202ENST00000477856 NPM1P06748 294 aaKnown RBP eCLIP9.8□□□□□ -0.84
CNTN3-202ENST00000477856 SLC4A1APQ9BWU0 796 aaKnown RBP9.8□□□□□ -0.84
CNTN3-202ENST00000477856 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
CNTN3-202ENST00000477856 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
CNTN3-202ENST00000477856 SEC24BO95487 1268 aa9.74□□□□□ -0.85
CNTN3-202ENST00000477856 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
CNTN3-202ENST00000477856 TMEM121BQ9BXQ6 578 aaPredicted RBP9.69□□□□□ -0.86
CNTN3-202ENST00000477856 COLQQ9Y215 455 aaPredicted RBP9.64□□□□□ -0.87
CNTN3-202ENST00000477856 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
CNTN3-202ENST00000477856 ZBTB22O15209 634 aa9.6□□□□□ -0.87
CNTN3-202ENST00000477856 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
CNTN3-202ENST00000477856 SNPHO15079 494 aa9.58□□□□□ -0.88
CNTN3-202ENST00000477856 TIE1P35590 1138 aa9.56□□□□□ -0.88
CNTN3-202ENST00000477856 TSPYL2Q9H2G4 693 aaPredicted RBP9.55□□□□□ -0.88
CNTN3-202ENST00000477856 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
CNTN3-202ENST00000477856 IER5LQ5T953 404 aa9.51□□□□□ -0.89
CNTN3-202ENST00000477856 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
CNTN3-202ENST00000477856 TRPC6Q9Y210 931 aa9.5□□□□□ -0.89
CNTN3-202ENST00000477856 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
CNTN3-202ENST00000477856 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.9
CNTN3-202ENST00000477856 EMP3P54852 163 aa9.46□□□□□ -0.9
CNTN3-202ENST00000477856 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
CNTN3-202ENST00000477856 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
CNTN3-202ENST00000477856 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
CNTN3-202ENST00000477856 MAP3K13O43283 966 aa9.41□□□□□ -0.9
CNTN3-202ENST00000477856 PLCG2P16885 1265 aa9.4□□□□□ -0.9
CNTN3-202ENST00000477856 HS3ST6Q96QI5 342 aa9.39□□□□□ -0.91
CNTN3-202ENST00000477856 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
CNTN3-202ENST00000477856 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
CNTN3-202ENST00000477856 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
CNTN3-202ENST00000477856 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
CNTN3-202ENST00000477856 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
CNTN3-202ENST00000477856 CCDC180Q9P1Z9 1646 aa9.3□□□□□ -0.92
CNTN3-202ENST00000477856 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
CNTN3-202ENST00000477856 IRX5P78411 483 aaPredicted RBP9.22□□□□□ -0.93
CNTN3-202ENST00000477856 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
CNTN3-202ENST00000477856 OCEL1Q9H607 264 aa9.22□□□□□ -0.93
CNTN3-202ENST00000477856 PCDHB13Q9Y5F0 798 aa9.21□□□□□ -0.94
CNTN3-202ENST00000477856 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
CNTN3-202ENST00000477856 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
CNTN3-202ENST00000477856 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
CNTN3-202ENST00000477856 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
CNTN3-202ENST00000477856 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
CNTN3-202ENST00000477856 IFNL1Q8IU54 200 aa9.08□□□□□ -0.96
CNTN3-202ENST00000477856 ERBB3P21860 1342 aa9.07□□□□□ -0.96
CNTN3-202ENST00000477856 PTGER2P43116 358 aa9.05□□□□□ -0.96
CNTN3-202ENST00000477856 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
CNTN3-202ENST00000477856 PLA2G2EQ9NZK7 142 aa9.03□□□□□ -0.96
CNTN3-202ENST00000477856 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
CNTN3-202ENST00000477856 HOXB1P14653 301 aaPredicted RBP8.98□□□□□ -0.97
CNTN3-202ENST00000477856 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
CNTN3-202ENST00000477856 MIER1Q8N108 512 aa8.94□□□□□ -0.98
CNTN3-202ENST00000477856 ABCC9O60706 1549 aa8.9□□□□□ -0.98
CNTN3-202ENST00000477856 HOXB3P14651 431 aaPredicted RBP8.9□□□□□ -0.98
CNTN3-202ENST00000477856 PDCD7Q8N8D1 485 aaKnown RBP8.9□□□□□ -0.98
CNTN3-202ENST00000477856 ANKRD13DQ6ZTN6 518 aa8.89□□□□□ -0.99
CNTN3-202ENST00000477856 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
CNTN3-202ENST00000477856 DOK7Q18PE1 504 aa8.88□□□□□ -0.99
CNTN3-202ENST00000477856 GOLGA2Q08379 1002 aa8.85□□□□□ -0.99
CNTN3-202ENST00000477856 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
CNTN3-202ENST00000477856 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
CNTN3-202ENST00000477856 HCSTQ9UBK5 93 aa8.83□□□□□ -1
CNTN3-202ENST00000477856 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
CNTN3-202ENST00000477856 FAM212AQ96EL1 285 aa8.81□□□□□ -1
CNTN3-202ENST00000477856 G3V3G9 751 aa8.8□□□□□ -1
CNTN3-202ENST00000477856 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
CNTN3-202ENST00000477856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -1
CNTN3-202ENST00000477856 ZCCHC6Q5VYS8 1495 aaKnown RBP8.77□□□□□ -1.01
CNTN3-202ENST00000477856 NUBP1P53384 320 aa8.76□□□□□ -1.01
CNTN3-202ENST00000477856 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
CNTN3-202ENST00000477856 PLCD3Q8N3E9 789 aa8.75□□□□□ -1.01
CNTN3-202ENST00000477856 PCDHB8Q9UN66 801 aa8.74□□□□□ -1.01
CNTN3-202ENST00000477856 RGS20O76081 388 aa8.71□□□□□ -1.02
CNTN3-202ENST00000477856 LSM11P83369 360 aaKnown RBP eCLIP8.71□□□□□ -1.02
CNTN3-202ENST00000477856 MYO15BQ96JP2 1530 aa8.7□□□□□ -1.02
CNTN3-202ENST00000477856 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
CNTN3-202ENST00000477856 NACADO15069 1562 aa8.7□□□□□ -1.02
CNTN3-202ENST00000477856 ZSWIM6Q9HCJ5 1215 aa8.7□□□□□ -1.02
CNTN3-202ENST00000477856 PYGBP11216 843 aa8.68□□□□□ -1.02
CNTN3-202ENST00000477856 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
CNTN3-202ENST00000477856 RB1CC1Q8TDY2 1594 aa8.68□□□□□ -1.02
CNTN3-202ENST00000477856 PROM2Q8N271 834 aa8.67□□□□□ -1.02
CNTN3-202ENST00000477856 DPY19L2Q6NUT2 758 aa8.65□□□□□ -1.02
CNTN3-202ENST00000477856 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
CNTN3-202ENST00000477856 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
CNTN3-202ENST00000477856 Q6ZNB5 142 aa8.59□□□□□ -1.03
CNTN3-202ENST00000477856 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
CNTN3-202ENST00000477856 ZNF467Q7Z7K2 595 aaPredicted RBP8.56□□□□□ -1.04
CNTN3-202ENST00000477856 PBX2P40425 430 aa8.55□□□□□ -1.04
CNTN3-202ENST00000477856 ZNF316A6NFI3 1004 aaPredicted RBP8.54□□□□□ -1.04
CNTN3-202ENST00000477856 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
CNTN3-202ENST00000477856 PSEN1P49768 467 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms