RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
LRCH3-215ENST00000476664 MIER1Q8N108 512 aa12.16□□□□□ -0.46
LRCH3-215ENST00000476664 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
LRCH3-215ENST00000476664 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-215ENST00000476664 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
LRCH3-215ENST00000476664 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
LRCH3-215ENST00000476664 POLA2Q14181 598 aa12.12□□□□□ -0.47
LRCH3-215ENST00000476664 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
LRCH3-215ENST00000476664 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
LRCH3-215ENST00000476664 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
LRCH3-215ENST00000476664 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
LRCH3-215ENST00000476664 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
LRCH3-215ENST00000476664 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
LRCH3-215ENST00000476664 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
LRCH3-215ENST00000476664 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
LRCH3-215ENST00000476664 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
LRCH3-215ENST00000476664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
LRCH3-215ENST00000476664 GSE1Q14687 1217 aa11.97□□□□□ -0.49
LRCH3-215ENST00000476664 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-215ENST00000476664 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LRCH3-215ENST00000476664 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
LRCH3-215ENST00000476664 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
LRCH3-215ENST00000476664 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
LRCH3-215ENST00000476664 STK25O00506 426 aa11.9□□□□□ -0.5
LRCH3-215ENST00000476664 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
LRCH3-215ENST00000476664 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
LRCH3-215ENST00000476664 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
LRCH3-215ENST00000476664 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
LRCH3-215ENST00000476664 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
LRCH3-215ENST00000476664 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
LRCH3-215ENST00000476664 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
LRCH3-215ENST00000476664 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
LRCH3-215ENST00000476664 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
LRCH3-215ENST00000476664 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
LRCH3-215ENST00000476664 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
LRCH3-215ENST00000476664 CAPN15O75808 1086 aa11.82□□□□□ -0.52
LRCH3-215ENST00000476664 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
LRCH3-215ENST00000476664 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
LRCH3-215ENST00000476664 RSPH6AQ9H0K4 717 aa11.79□□□□□ -0.52
LRCH3-215ENST00000476664 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
LRCH3-215ENST00000476664 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
LRCH3-215ENST00000476664 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
LRCH3-215ENST00000476664 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
LRCH3-215ENST00000476664 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
LRCH3-215ENST00000476664 HRCP23327 699 aa11.71□□□□□ -0.53
LRCH3-215ENST00000476664 BCL11BQ9C0K0 894 aaPredicted RBP11.71□□□□□ -0.53
LRCH3-215ENST00000476664 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
LRCH3-215ENST00000476664 NUBP1P53384 320 aa11.68□□□□□ -0.54
LRCH3-215ENST00000476664 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
LRCH3-215ENST00000476664 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
LRCH3-215ENST00000476664 ABCB7O75027 752 aa11.66□□□□□ -0.54
LRCH3-215ENST00000476664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
LRCH3-215ENST00000476664 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
LRCH3-215ENST00000476664 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
LRCH3-215ENST00000476664 CHRM1P11229 460 aaPredicted RBP11.64□□□□□ -0.55
LRCH3-215ENST00000476664 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
LRCH3-215ENST00000476664 NESP48681 1621 aa11.62□□□□□ -0.55
LRCH3-215ENST00000476664 ZMYND10O75800 440 aa11.61□□□□□ -0.55
LRCH3-215ENST00000476664 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
LRCH3-215ENST00000476664 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
LRCH3-215ENST00000476664 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
LRCH3-215ENST00000476664 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
LRCH3-215ENST00000476664 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
LRCH3-215ENST00000476664 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
LRCH3-215ENST00000476664 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
LRCH3-215ENST00000476664 ARID3AQ99856 593 aa11.59□□□□□ -0.55
LRCH3-215ENST00000476664 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
LRCH3-215ENST00000476664 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
LRCH3-215ENST00000476664 SEMA3EO15041 775 aa11.53□□□□□ -0.56
LRCH3-215ENST00000476664 PDIA4P13667 645 aaKnown RBP11.53□□□□□ -0.56
LRCH3-215ENST00000476664 E2F4Q16254 413 aa11.53□□□□□ -0.56
LRCH3-215ENST00000476664 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
LRCH3-215ENST00000476664 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
LRCH3-215ENST00000476664 AK7Q96M32 723 aa11.51□□□□□ -0.57
LRCH3-215ENST00000476664 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
LRCH3-215ENST00000476664 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
LRCH3-215ENST00000476664 C1orf115Q9H7X2 142 aa11.45□□□□□ -0.58
LRCH3-215ENST00000476664 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
LRCH3-215ENST00000476664 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
LRCH3-215ENST00000476664 RNF39Q9H2S5 420 aa11.43□□□□□ -0.58
LRCH3-215ENST00000476664 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
LRCH3-215ENST00000476664 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
LRCH3-215ENST00000476664 APBB1O00213 710 aa11.42□□□□□ -0.58
LRCH3-215ENST00000476664 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
LRCH3-215ENST00000476664 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
LRCH3-215ENST00000476664 KRI1Q8N9T8 703 aaKnown RBP11.39□□□□□ -0.59
LRCH3-215ENST00000476664 PYGBP11216 843 aa11.38□□□□□ -0.59
LRCH3-215ENST00000476664 FLIIQ13045 1269 aa11.38□□□□□ -0.59
LRCH3-215ENST00000476664 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
LRCH3-215ENST00000476664 ARID3CA6NKF2 412 aa11.35□□□□□ -0.59
LRCH3-215ENST00000476664 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
LRCH3-215ENST00000476664 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
LRCH3-215ENST00000476664 PDE4DQ08499 809 aa11.32□□□□□ -0.6
LRCH3-215ENST00000476664 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
LRCH3-215ENST00000476664 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
LRCH3-215ENST00000476664 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
LRCH3-215ENST00000476664 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
LRCH3-215ENST00000476664 TRIM66O15016 1216 aa11.29□□□□□ -0.6
LRCH3-215ENST00000476664 DSG3P32926 999 aa11.29□□□□□ -0.6
LRCH3-215ENST00000476664 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms