RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 FAM69CQ0P6D2 419 aa29.57■■■□□ 2.32
APOBEC3F-203ENST00000476513 ABCC10Q5T3U5 1492 aa29.55■■■□□ 2.32
APOBEC3F-203ENST00000476513 RUSC2Q8N2Y8 1516 aa29.51■■■□□ 2.32
APOBEC3F-203ENST00000476513 NPM1P06748 294 aaKnown RBP eCLIP29.51■■■□□ 2.31
APOBEC3F-203ENST00000476513 MAPKBP1O60336 1514 aa29.48■■■□□ 2.31
APOBEC3F-203ENST00000476513 DIP2BQ9P265 1576 aa29.43■■■□□ 2.3
APOBEC3F-203ENST00000476513 ADCY10Q96PN6 1610 aa29.42■■■□□ 2.3
APOBEC3F-203ENST00000476513 KIAA0586Q9BVV6 1533 aa29.35■■■□□ 2.29
APOBEC3F-203ENST00000476513 KDM4FA0A1W2PPD8 638 aa29.31■■■□□ 2.28
APOBEC3F-203ENST00000476513 IGF1RP08069 1367 aa29.3■■■□□ 2.28
APOBEC3F-203ENST00000476513 KDM6BO15054 1643 aa29.3■■■□□ 2.28
APOBEC3F-203ENST00000476513 KIF27Q86VH2 1401 aa29.2■■■□□ 2.27
APOBEC3F-203ENST00000476513 PTPRGP23470 1445 aa29.2■■■□□ 2.26
APOBEC3F-203ENST00000476513 TSPOAP1O95153 1857 aa29.19■■■□□ 2.26
APOBEC3F-203ENST00000476513 CUL7Q14999 1698 aa29.18■■■□□ 2.26
APOBEC3F-203ENST00000476513 TTBK1Q5TCY1 1321 aaPredicted RBP29.13■■■□□ 2.25
APOBEC3F-203ENST00000476513 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
APOBEC3F-203ENST00000476513 ABCC2Q92887 1545 aa29.09■■■□□ 2.25
APOBEC3F-203ENST00000476513 CARMIL1Q5VZK9 1371 aa29.08■■■□□ 2.25
APOBEC3F-203ENST00000476513 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
APOBEC3F-203ENST00000476513 ASXL2Q76L83 1435 aa29.05■■■□□ 2.24
APOBEC3F-203ENST00000476513 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
APOBEC3F-203ENST00000476513 GLI2P10070 1586 aa29.01■■■□□ 2.23
APOBEC3F-203ENST00000476513 PPRC1Q5VV67 1664 aaKnown RBP28.98■■■□□ 2.23
APOBEC3F-203ENST00000476513 UHRF1BP1LA0JNW5 1464 aa28.97■■■□□ 2.23
APOBEC3F-203ENST00000476513 IQGAP2Q13576 1575 aa28.96■■■□□ 2.23
APOBEC3F-203ENST00000476513 ILDR1Q86SU0 546 aaPredicted RBP28.95■■■□□ 2.22
APOBEC3F-203ENST00000476513 UACAQ9BZF9 1416 aa28.94■■■□□ 2.22
APOBEC3F-203ENST00000476513 ADGRL1O94910 1474 aa28.91■■■□□ 2.22
APOBEC3F-203ENST00000476513 DISP1Q96F81 1524 aa28.9■■■□□ 2.22
APOBEC3F-203ENST00000476513 COL17A1Q9UMD9 1497 aaPredicted RBP28.9■■■□□ 2.22
APOBEC3F-203ENST00000476513 EPRSP07814 1512 aaKnown RBP28.87■■■□□ 2.21
APOBEC3F-203ENST00000476513 KDM5BQ9UGL1 1544 aa28.85■■■□□ 2.21
APOBEC3F-203ENST00000476513 MAP3K4Q9Y6R4 1608 aa28.8■■■□□ 2.2
APOBEC3F-203ENST00000476513 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
APOBEC3F-203ENST00000476513 UGGT2Q9NYU1 1516 aa28.78■■■□□ 2.2
APOBEC3F-203ENST00000476513 ZCCHC11Q5TAX3 1644 aaKnown RBP28.75■■■□□ 2.19
APOBEC3F-203ENST00000476513 RAPGEF2Q9Y4G8 1499 aa28.73■■■□□ 2.19
APOBEC3F-203ENST00000476513 KIAA0556O60303 1618 aa28.7■■■□□ 2.19
APOBEC3F-203ENST00000476513 HECW2Q9P2P5 1572 aa28.67■■■□□ 2.18
APOBEC3F-203ENST00000476513 WDR7Q9Y4E6 1490 aa28.67■■■□□ 2.18
APOBEC3F-203ENST00000476513 CD109Q6YHK3 1445 aa28.57■■■□□ 2.16
APOBEC3F-203ENST00000476513 MAGI3Q5TCQ9 1506 aa28.56■■■□□ 2.16
APOBEC3F-203ENST00000476513 KCNH8Q96L42 1107 aa28.54■■■□□ 2.16
APOBEC3F-203ENST00000476513 ABCA8O94911 1581 aa28.5■■■□□ 2.15
APOBEC3F-203ENST00000476513 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
APOBEC3F-203ENST00000476513 CFAP43Q8NDM7 1665 aa28.48■■■□□ 2.15
APOBEC3F-203ENST00000476513 CTTNBP2Q8WZ74 1663 aa28.44■■■□□ 2.14
APOBEC3F-203ENST00000476513 KIF21BO75037 1637 aa28.36■■■□□ 2.13
APOBEC3F-203ENST00000476513 ARAP3Q8WWN8 1544 aa28.35■■■□□ 2.13
APOBEC3F-203ENST00000476513 ARID3CA6NKF2 412 aa28.32■■■□□ 2.12
APOBEC3F-203ENST00000476513 PRXQ9BXM0 1461 aa28.32■■■□□ 2.12
APOBEC3F-203ENST00000476513 ATP10BO94823 1461 aa28.27■■■□□ 2.12
APOBEC3F-203ENST00000476513 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
APOBEC3F-203ENST00000476513 PHLDB1Q86UU1 1377 aa28.24■■■□□ 2.11
APOBEC3F-203ENST00000476513 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
APOBEC3F-203ENST00000476513 FBXO41Q8TF61 875 aa28.23■■■□□ 2.11
APOBEC3F-203ENST00000476513 PTPRMP28827 1452 aa28.21■■■□□ 2.11
APOBEC3F-203ENST00000476513 RAPGEF3O95398 923 aa28.2■■■□□ 2.1
APOBEC3F-203ENST00000476513 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
APOBEC3F-203ENST00000476513 ADAMTSL3P82987 1691 aa28.18■■■□□ 2.1
APOBEC3F-203ENST00000476513 NEO1Q92859 1461 aa28.14■■■□□ 2.09
APOBEC3F-203ENST00000476513 ARID4BQ4LE39 1312 aaPredicted RBP28.08■■■□□ 2.09
APOBEC3F-203ENST00000476513 FRMPD1Q5SYB0 1578 aa28.07■■■□□ 2.08
APOBEC3F-203ENST00000476513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.07■■■□□ 2.08
APOBEC3F-203ENST00000476513 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
APOBEC3F-203ENST00000476513 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
APOBEC3F-203ENST00000476513 RAPGEF6Q8TEU7 1601 aa28.06■■■□□ 2.08
APOBEC3F-203ENST00000476513 BCORL1Q5H9F3 1711 aa28.05■■■□□ 2.08
APOBEC3F-203ENST00000476513 MADDQ8WXG6 1647 aa28.03■■■□□ 2.08
APOBEC3F-203ENST00000476513 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
APOBEC3F-203ENST00000476513 LMTK3Q96Q04 1460 aa28.01■■■□□ 2.07
APOBEC3F-203ENST00000476513 NUP153P49790 1475 aaKnown RBP28■■■□□ 2.07
APOBEC3F-203ENST00000476513 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
APOBEC3F-203ENST00000476513 ARHGEF40Q8TER5 1519 aa27.95■■■□□ 2.06
APOBEC3F-203ENST00000476513 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
APOBEC3F-203ENST00000476513 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
APOBEC3F-203ENST00000476513 FHOD3Q2V2M9 1422 aa27.91■■■□□ 2.06
APOBEC3F-203ENST00000476513 AKNAQ7Z591 1439 aa27.91■■■□□ 2.06
APOBEC3F-203ENST00000476513 RANGAP1P46060 587 aaPredicted RBP27.9■■■□□ 2.06
APOBEC3F-203ENST00000476513 RIMS1Q86UR5 1692 aaKnown RBP27.89■■■□□ 2.06
APOBEC3F-203ENST00000476513 RICTORQ6R327 1708 aa27.88■■■□□ 2.05
APOBEC3F-203ENST00000476513 FANCAO15360 1455 aa27.88■■■□□ 2.05
APOBEC3F-203ENST00000476513 HSPA2P54652 639 aa27.87■■■□□ 2.05
APOBEC3F-203ENST00000476513 PLPPR3Q6T4P5 718 aa27.83■■■□□ 2.05
APOBEC3F-203ENST00000476513 POGZQ7Z3K3 1410 aa27.83■■■□□ 2.05
APOBEC3F-203ENST00000476513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.82■■■□□ 2.04
APOBEC3F-203ENST00000476513 YEATS2Q9ULM3 1422 aa27.81■■■□□ 2.04
APOBEC3F-203ENST00000476513 ZMYM4Q5VZL5 1548 aa27.81■■■□□ 2.04
APOBEC3F-203ENST00000476513 CFAP74Q9C0B2 1584 aa27.81■■■□□ 2.04
APOBEC3F-203ENST00000476513 ZFYVE16Q7Z3T8 1539 aa27.78■■■□□ 2.04
APOBEC3F-203ENST00000476513 TTC37Q6PGP7 1564 aa27.77■■■□□ 2.04
APOBEC3F-203ENST00000476513 SIGLEC1Q9BZZ2 1709 aa27.76■■■□□ 2.03
APOBEC3F-203ENST00000476513 EFCAB5A4FU69 1503 aa27.76■■■□□ 2.03
APOBEC3F-203ENST00000476513 MAGI2Q86UL8 1455 aa27.75■■■□□ 2.03
APOBEC3F-203ENST00000476513 MLECQ14165 292 aa27.74■■■□□ 2.03
APOBEC3F-203ENST00000476513 EEA1Q15075 1411 aa27.72■■■□□ 2.03
APOBEC3F-203ENST00000476513 CERKQ8TCT0 537 aa27.71■■■□□ 2.03
APOBEC3F-203ENST00000476513 HECW1Q76N89 1606 aa27.7■■■□□ 2.03
APOBEC3F-203ENST00000476513 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms