RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 NACADO15069 1562 aa13.13□□□□□ -0.31
CDH23-211ENST00000475158 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
CDH23-211ENST00000475158 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
CDH23-211ENST00000475158 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
CDH23-211ENST00000475158 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
CDH23-211ENST00000475158 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
CDH23-211ENST00000475158 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
CDH23-211ENST00000475158 EEA1Q15075 1411 aa13.11□□□□□ -0.31
CDH23-211ENST00000475158 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
CDH23-211ENST00000475158 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
CDH23-211ENST00000475158 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
CDH23-211ENST00000475158 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
CDH23-211ENST00000475158 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
CDH23-211ENST00000475158 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH23-211ENST00000475158 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
CDH23-211ENST00000475158 CCDC136Q96JN2 1154 aa13.03□□□□□ -0.32
CDH23-211ENST00000475158 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
CDH23-211ENST00000475158 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
CDH23-211ENST00000475158 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
CDH23-211ENST00000475158 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
CDH23-211ENST00000475158 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
CDH23-211ENST00000475158 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
CDH23-211ENST00000475158 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH23-211ENST00000475158 FOXD1Q16676 465 aa12.98□□□□□ -0.33
CDH23-211ENST00000475158 CUX2O14529 1486 aa12.98□□□□□ -0.33
CDH23-211ENST00000475158 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CDH23-211ENST00000475158 CCNB3Q8WWL7 1395 aa12.97□□□□□ -0.33
CDH23-211ENST00000475158 WIZO95785 1651 aa12.97□□□□□ -0.33
CDH23-211ENST00000475158 NEFMP07197 916 aa12.97□□□□□ -0.33
CDH23-211ENST00000475158 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
CDH23-211ENST00000475158 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
CDH23-211ENST00000475158 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
CDH23-211ENST00000475158 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
CDH23-211ENST00000475158 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.93□□□□□ -0.34
CDH23-211ENST00000475158 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
CDH23-211ENST00000475158 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDH23-211ENST00000475158 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
CDH23-211ENST00000475158 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
CDH23-211ENST00000475158 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
CDH23-211ENST00000475158 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
CDH23-211ENST00000475158 ARXQ96QS3 562 aa12.86□□□□□ -0.35
CDH23-211ENST00000475158 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
CDH23-211ENST00000475158 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
CDH23-211ENST00000475158 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
CDH23-211ENST00000475158 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
CDH23-211ENST00000475158 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
CDH23-211ENST00000475158 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
CDH23-211ENST00000475158 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
CDH23-211ENST00000475158 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
CDH23-211ENST00000475158 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
CDH23-211ENST00000475158 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
CDH23-211ENST00000475158 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
CDH23-211ENST00000475158 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
CDH23-211ENST00000475158 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.36
CDH23-211ENST00000475158 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.36
CDH23-211ENST00000475158 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.76□□□□□ -0.37
CDH23-211ENST00000475158 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
CDH23-211ENST00000475158 KNSTRNQ9Y448 316 aa12.76□□□□□ -0.37
CDH23-211ENST00000475158 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
CDH23-211ENST00000475158 PKD2Q13563 968 aa12.75□□□□□ -0.37
CDH23-211ENST00000475158 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
CDH23-211ENST00000475158 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
CDH23-211ENST00000475158 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
CDH23-211ENST00000475158 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDH23-211ENST00000475158 UPF2Q9HAU5 1272 aaKnown RBP12.72□□□□□ -0.37
CDH23-211ENST00000475158 PPP1R15AO75807 674 aaPredicted RBP12.71□□□□□ -0.37
CDH23-211ENST00000475158 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.37
CDH23-211ENST00000475158 RGS3P49796 1198 aa12.7□□□□□ -0.38
CDH23-211ENST00000475158 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
CDH23-211ENST00000475158 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
CDH23-211ENST00000475158 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
CDH23-211ENST00000475158 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CDH23-211ENST00000475158 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
CDH23-211ENST00000475158 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
CDH23-211ENST00000475158 MLECQ14165 292 aa12.66□□□□□ -0.38
CDH23-211ENST00000475158 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
CDH23-211ENST00000475158 GGT6Q6P531 493 aa12.65□□□□□ -0.38
CDH23-211ENST00000475158 PPP4R2Q9NY27 417 aa12.65□□□□□ -0.38
CDH23-211ENST00000475158 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
CDH23-211ENST00000475158 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
CDH23-211ENST00000475158 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
CDH23-211ENST00000475158 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
CDH23-211ENST00000475158 HNRNPMP52272 730 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDH23-211ENST00000475158 SOX12O15370 315 aa12.63□□□□□ -0.39
CDH23-211ENST00000475158 NUP155O75694 1391 aa12.63□□□□□ -0.39
CDH23-211ENST00000475158 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
CDH23-211ENST00000475158 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
CDH23-211ENST00000475158 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
CDH23-211ENST00000475158 A0A0G2JS52 829 aa12.61□□□□□ -0.39
CDH23-211ENST00000475158 POGKQ9P215 609 aa12.6□□□□□ -0.39
CDH23-211ENST00000475158 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
CDH23-211ENST00000475158 STK26Q9P289 416 aa12.6□□□□□ -0.39
CDH23-211ENST00000475158 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
CDH23-211ENST00000475158 TMF1P82094 1093 aa12.59□□□□□ -0.39
CDH23-211ENST00000475158 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
CDH23-211ENST00000475158 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
CDH23-211ENST00000475158 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
CDH23-211ENST00000475158 NAP1L5Q96NT1 182 aaPredicted RBP12.56□□□□□ -0.4
CDH23-211ENST00000475158 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
CDH23-211ENST00000475158 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms