RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 FAM69CQ0P6D2 419 aa22.4■■□□□ 1.18
TRIM13-207ENST00000474805 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
TRIM13-207ENST00000474805 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
TRIM13-207ENST00000474805 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
TRIM13-207ENST00000474805 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
TRIM13-207ENST00000474805 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
TRIM13-207ENST00000474805 ADCY10Q96PN6 1610 aa22.29■■□□□ 1.16
TRIM13-207ENST00000474805 TSPOAP1O95153 1857 aa22.27■■□□□ 1.16
TRIM13-207ENST00000474805 KDM4FA0A1W2PPD8 638 aa22.24■■□□□ 1.15
TRIM13-207ENST00000474805 KDM6BO15054 1643 aa22.24■■□□□ 1.15
TRIM13-207ENST00000474805 KIAA0586Q9BVV6 1533 aa22.16■■□□□ 1.14
TRIM13-207ENST00000474805 IGF1RP08069 1367 aa22.11■■□□□ 1.13
TRIM13-207ENST00000474805 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
TRIM13-207ENST00000474805 CUL7Q14999 1698 aa22.07■■□□□ 1.12
TRIM13-207ENST00000474805 PTPRGP23470 1445 aa22.06■■□□□ 1.12
TRIM13-207ENST00000474805 ILDR1Q86SU0 546 aaPredicted RBP22.03■■□□□ 1.12
TRIM13-207ENST00000474805 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
TRIM13-207ENST00000474805 PPRC1Q5VV67 1664 aaKnown RBP22■■□□□ 1.11
TRIM13-207ENST00000474805 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
TRIM13-207ENST00000474805 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
TRIM13-207ENST00000474805 TNIKQ9UKE5 1360 aa21.97■■□□□ 1.11
TRIM13-207ENST00000474805 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
TRIM13-207ENST00000474805 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
TRIM13-207ENST00000474805 GLI2P10070 1586 aa21.95■■□□□ 1.1
TRIM13-207ENST00000474805 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
TRIM13-207ENST00000474805 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
TRIM13-207ENST00000474805 IQGAP2Q13576 1575 aa21.9■■□□□ 1.1
TRIM13-207ENST00000474805 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
TRIM13-207ENST00000474805 COL17A1Q9UMD9 1497 aaPredicted RBP21.88■■□□□ 1.09
TRIM13-207ENST00000474805 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
TRIM13-207ENST00000474805 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
TRIM13-207ENST00000474805 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
TRIM13-207ENST00000474805 EPRSP07814 1512 aaKnown RBP21.83■■□□□ 1.09
TRIM13-207ENST00000474805 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
TRIM13-207ENST00000474805 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
TRIM13-207ENST00000474805 HECW2Q9P2P5 1572 aa21.78■■□□□ 1.08
TRIM13-207ENST00000474805 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.07
TRIM13-207ENST00000474805 UGGT2Q9NYU1 1516 aa21.73■■□□□ 1.07
TRIM13-207ENST00000474805 KIAA0556O60303 1618 aa21.7■■□□□ 1.06
TRIM13-207ENST00000474805 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
TRIM13-207ENST00000474805 WDR7Q9Y4E6 1490 aa21.67■■□□□ 1.06
TRIM13-207ENST00000474805 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
TRIM13-207ENST00000474805 CFAP43Q8NDM7 1665 aa21.61■■□□□ 1.05
TRIM13-207ENST00000474805 CD109Q6YHK3 1445 aa21.61■■□□□ 1.05
TRIM13-207ENST00000474805 MAGI3Q5TCQ9 1506 aa21.59■■□□□ 1.05
TRIM13-207ENST00000474805 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
TRIM13-207ENST00000474805 KIF21BO75037 1637 aa21.55■■□□□ 1.04
TRIM13-207ENST00000474805 ABCA8O94911 1581 aa21.53■■□□□ 1.04
TRIM13-207ENST00000474805 GOLGA3Q08378 1498 aa21.5■■□□□ 1.03
TRIM13-207ENST00000474805 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
TRIM13-207ENST00000474805 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
TRIM13-207ENST00000474805 FBXO41Q8TF61 875 aa21.42■■□□□ 1.02
TRIM13-207ENST00000474805 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
TRIM13-207ENST00000474805 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
TRIM13-207ENST00000474805 ATP10BO94823 1461 aa21.38■■□□□ 1.01
TRIM13-207ENST00000474805 PTPRMP28827 1452 aa21.38■■□□□ 1.01
TRIM13-207ENST00000474805 RAPGEF3O95398 923 aa21.35■■□□□ 1.01
TRIM13-207ENST00000474805 ABCA9Q8IUA7 1624 aa21.34■■□□□ 1.01
TRIM13-207ENST00000474805 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
TRIM13-207ENST00000474805 PRXQ9BXM0 1461 aa21.33■■□□□ 1.01
TRIM13-207ENST00000474805 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
TRIM13-207ENST00000474805 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
TRIM13-207ENST00000474805 ARID4BQ4LE39 1312 aaPredicted RBP21.28■■□□□ 1
TRIM13-207ENST00000474805 MADDQ8WXG6 1647 aa21.27■■□□□ 1
TRIM13-207ENST00000474805 NEO1Q92859 1461 aa21.26■□□□□ 0.99
TRIM13-207ENST00000474805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
TRIM13-207ENST00000474805 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
TRIM13-207ENST00000474805 FRMPD1Q5SYB0 1578 aa21.25■□□□□ 0.99
TRIM13-207ENST00000474805 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
TRIM13-207ENST00000474805 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
TRIM13-207ENST00000474805 LMTK3Q96Q04 1460 aa21.21■□□□□ 0.99
TRIM13-207ENST00000474805 RIMS1Q86UR5 1692 aaKnown RBP21.21■□□□□ 0.99
TRIM13-207ENST00000474805 SAMD9Q5K651 1589 aa21.2■□□□□ 0.98
TRIM13-207ENST00000474805 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
TRIM13-207ENST00000474805 RICTORQ6R327 1708 aa21.15■□□□□ 0.98
TRIM13-207ENST00000474805 HSPA2P54652 639 aa21.14■□□□□ 0.97
TRIM13-207ENST00000474805 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.97
TRIM13-207ENST00000474805 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
TRIM13-207ENST00000474805 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
TRIM13-207ENST00000474805 DENND4BO75064 1496 aaPredicted RBP21.12■□□□□ 0.97
TRIM13-207ENST00000474805 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
TRIM13-207ENST00000474805 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
TRIM13-207ENST00000474805 AKNAQ7Z591 1439 aa21.1■□□□□ 0.97
TRIM13-207ENST00000474805 SIGLEC1Q9BZZ2 1709 aa21.08■□□□□ 0.97
TRIM13-207ENST00000474805 FHOD3Q2V2M9 1422 aa21.07■□□□□ 0.96
TRIM13-207ENST00000474805 FANCAO15360 1455 aa21.07■□□□□ 0.96
TRIM13-207ENST00000474805 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
TRIM13-207ENST00000474805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
TRIM13-207ENST00000474805 MLECQ14165 292 aa21.04■□□□□ 0.96
TRIM13-207ENST00000474805 POGZQ7Z3K3 1410 aa21.04■□□□□ 0.96
TRIM13-207ENST00000474805 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
TRIM13-207ENST00000474805 CERKQ8TCT0 537 aa21.02■□□□□ 0.96
TRIM13-207ENST00000474805 ZFYVE16Q7Z3T8 1539 aa21.02■□□□□ 0.96
TRIM13-207ENST00000474805 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.95
TRIM13-207ENST00000474805 FER1L4A9Z1Z3 1794 aa21.01■□□□□ 0.95
TRIM13-207ENST00000474805 ZMYM4Q5VZL5 1548 aa21.01■□□□□ 0.95
TRIM13-207ENST00000474805 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
TRIM13-207ENST00000474805 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
TRIM13-207ENST00000474805 MAGI2Q86UL8 1455 aa20.96■□□□□ 0.95
TRIM13-207ENST00000474805 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms