RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
PKNOX1-205ENST00000474336 ATMINO43313 823 aaPredicted RBP15.4■□□□□ 0.06
PKNOX1-205ENST00000474336 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
PKNOX1-205ENST00000474336 METRNQ9UJH8 293 aa15.38■□□□□ 0.05
PKNOX1-205ENST00000474336 C7P10643 843 aa15.37■□□□□ 0.05
PKNOX1-205ENST00000474336 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
PKNOX1-205ENST00000474336 PLSCR2Q9NRY7 297 aa15.35■□□□□ 0.05
PKNOX1-205ENST00000474336 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
PKNOX1-205ENST00000474336 KIF12Q96FN5 646 aa15.3■□□□□ 0.04
PKNOX1-205ENST00000474336 MIER1Q8N108 512 aa15.29■□□□□ 0.04
PKNOX1-205ENST00000474336 ATN1P54259 1190 aaPredicted RBP15.26■□□□□ 0.03
PKNOX1-205ENST00000474336 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
PKNOX1-205ENST00000474336 POTEJP0CG39 1038 aa15.24■□□□□ 0.03
PKNOX1-205ENST00000474336 POTEMA6NI47 508 aa15.23■□□□□ 0.03
PKNOX1-205ENST00000474336 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
PKNOX1-205ENST00000474336 MAP3K13O43283 966 aa15.19■□□□□ 0.02
PKNOX1-205ENST00000474336 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
PKNOX1-205ENST00000474336 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
PKNOX1-205ENST00000474336 TIE1P35590 1138 aa15.15■□□□□ 0.02
PKNOX1-205ENST00000474336 TRPC6Q9Y210 931 aa15.15■□□□□ 0.02
PKNOX1-205ENST00000474336 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
PKNOX1-205ENST00000474336 SCUBE2Q9NQ36 999 aa15.13■□□□□ 0.01
PKNOX1-205ENST00000474336 POTEFA5A3E0 1075 aa15.09■□□□□ 0.01
PKNOX1-205ENST00000474336 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
PKNOX1-205ENST00000474336 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
PKNOX1-205ENST00000474336 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
PKNOX1-205ENST00000474336 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
PKNOX1-205ENST00000474336 SEC24BO95487 1268 aa15.01□□□□□ -0.01
PKNOX1-205ENST00000474336 FAM163AQ96GL9 167 aaPredicted RBP15.01□□□□□ -0.01
PKNOX1-205ENST00000474336 NUBP1P53384 320 aa15□□□□□ -0.01
PKNOX1-205ENST00000474336 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
PKNOX1-205ENST00000474336 LCE2DQ5TA82 110 aaPredicted RBP14.98□□□□□ -0.01
PKNOX1-205ENST00000474336 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
PKNOX1-205ENST00000474336 IER5LQ5T953 404 aa14.95□□□□□ -0.02
PKNOX1-205ENST00000474336 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
PKNOX1-205ENST00000474336 FAM212AQ96EL1 285 aa14.91□□□□□ -0.02
PKNOX1-205ENST00000474336 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
PKNOX1-205ENST00000474336 FKBP8Q14318 412 aa14.87□□□□□ -0.03
PKNOX1-205ENST00000474336 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
PKNOX1-205ENST00000474336 PLCG2P16885 1265 aa14.76□□□□□ -0.05
PKNOX1-205ENST00000474336 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
PKNOX1-205ENST00000474336 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
PKNOX1-205ENST00000474336 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
PKNOX1-205ENST00000474336 PYGBP11216 843 aa14.7□□□□□ -0.06
PKNOX1-205ENST00000474336 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
PKNOX1-205ENST00000474336 ABCC9O60706 1549 aa14.69□□□□□ -0.06
PKNOX1-205ENST00000474336 CDAN1Q8IWY9 1227 aa14.66□□□□□ -0.06
PKNOX1-205ENST00000474336 OCEL1Q9H607 264 aa14.66□□□□□ -0.06
PKNOX1-205ENST00000474336 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
PKNOX1-205ENST00000474336 ST18O60284 1047 aa14.64□□□□□ -0.07
PKNOX1-205ENST00000474336 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
PKNOX1-205ENST00000474336 GSE1Q14687 1217 aa14.55□□□□□ -0.08
PKNOX1-205ENST00000474336 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
PKNOX1-205ENST00000474336 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
PKNOX1-205ENST00000474336 SNPHO15079 494 aa14.52□□□□□ -0.09
PKNOX1-205ENST00000474336 ZNF467Q7Z7K2 595 aaPredicted RBP14.51□□□□□ -0.09
PKNOX1-205ENST00000474336 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
PKNOX1-205ENST00000474336 VASPP50552 380 aaPredicted RBP14.49□□□□□ -0.09
PKNOX1-205ENST00000474336 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
PKNOX1-205ENST00000474336 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
PKNOX1-205ENST00000474336 GOLGA2Q08379 1002 aa14.46□□□□□ -0.09
PKNOX1-205ENST00000474336 MKRN3Q13064 507 aaKnown RBP14.45□□□□□ -0.1
PKNOX1-205ENST00000474336 PDCD7Q8N8D1 485 aaKnown RBP14.44□□□□□ -0.1
PKNOX1-205ENST00000474336 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
PKNOX1-205ENST00000474336 L3MBTL3Q96JM7 780 aaPredicted RBP14.41□□□□□ -0.1
PKNOX1-205ENST00000474336 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
PKNOX1-205ENST00000474336 PSEN1P49768 467 aa14.38□□□□□ -0.11
PKNOX1-205ENST00000474336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.11
PKNOX1-205ENST00000474336 MARVELD3Q96A59 401 aa14.35□□□□□ -0.11
PKNOX1-205ENST00000474336 NACADO15069 1562 aa14.34□□□□□ -0.11
PKNOX1-205ENST00000474336 SPNS2Q8IVW8 549 aa14.31□□□□□ -0.12
PKNOX1-205ENST00000474336 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
PKNOX1-205ENST00000474336 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
PKNOX1-205ENST00000474336 MMRN1Q13201 1228 aa14.29□□□□□ -0.12
PKNOX1-205ENST00000474336 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-205ENST00000474336 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
PKNOX1-205ENST00000474336 EMP3P54852 163 aa14.24□□□□□ -0.13
PKNOX1-205ENST00000474336 SPOCK2Q92563 424 aa14.24□□□□□ -0.13
PKNOX1-205ENST00000474336 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
PKNOX1-205ENST00000474336 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
PKNOX1-205ENST00000474336 IFNLR1Q8IU57 520 aaPredicted RBP14.21□□□□□ -0.13
PKNOX1-205ENST00000474336 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
PKNOX1-205ENST00000474336 G3V3G9 751 aa14.18□□□□□ -0.14
PKNOX1-205ENST00000474336 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
PKNOX1-205ENST00000474336 BOLA1Q9Y3E2 137 aa14.16□□□□□ -0.14
PKNOX1-205ENST00000474336 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
PKNOX1-205ENST00000474336 HS3ST6Q96QI5 342 aa14.15□□□□□ -0.14
PKNOX1-205ENST00000474336 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
PKNOX1-205ENST00000474336 UNC13AQ9UPW8 1703 aa14.13□□□□□ -0.15
PKNOX1-205ENST00000474336 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
PKNOX1-205ENST00000474336 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
PKNOX1-205ENST00000474336 KRTAP3-3Q9BYR6 98 aa14.09□□□□□ -0.15
PKNOX1-205ENST00000474336 KRTAP3-2Q9BYR7 98 aa14.09□□□□□ -0.15
PKNOX1-205ENST00000474336 HOXB3P14651 431 aaPredicted RBP14.06□□□□□ -0.16
PKNOX1-205ENST00000474336 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
PKNOX1-205ENST00000474336 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
PKNOX1-205ENST00000474336 HOXB1P14653 301 aaPredicted RBP14.01□□□□□ -0.17
PKNOX1-205ENST00000474336 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
PKNOX1-205ENST00000474336 DOK7Q18PE1 504 aa14□□□□□ -0.17
PKNOX1-205ENST00000474336 ERBB3P21860 1342 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms