RNA–Protein interactions for RNA: ENST00000474125.6

PDZD7-204, Transcript of PDZ domain containing 7, humanhuman

TSL 2

Gene PDZD7, Length 4,433 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD7-204ENST00000474125 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
PDZD7-204ENST00000474125 ERICH6BQ5W0A0 696 aa17■□□□□ 0.31
PDZD7-204ENST00000474125 ZNF777Q9ULD5 760 aaPredicted RBP17■□□□□ 0.31
PDZD7-204ENST00000474125 NAP1L5Q96NT1 182 aaPredicted RBP17■□□□□ 0.31
PDZD7-204ENST00000474125 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
PDZD7-204ENST00000474125 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
PDZD7-204ENST00000474125 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
PDZD7-204ENST00000474125 CLIP1P30622 1438 aa16.95■□□□□ 0.3
PDZD7-204ENST00000474125 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
PDZD7-204ENST00000474125 SOGA1O94964 1423 aa16.94■□□□□ 0.3
PDZD7-204ENST00000474125 PPM1GO15355 546 aaPredicted RBP16.94■□□□□ 0.3
PDZD7-204ENST00000474125 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
PDZD7-204ENST00000474125 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
PDZD7-204ENST00000474125 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
PDZD7-204ENST00000474125 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
PDZD7-204ENST00000474125 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.29
PDZD7-204ENST00000474125 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
PDZD7-204ENST00000474125 RGS3P49796 1198 aa16.86■□□□□ 0.29
PDZD7-204ENST00000474125 BECN1Q14457 450 aa16.84■□□□□ 0.29
PDZD7-204ENST00000474125 WDR43Q15061 677 aaKnown RBP eCLIP16.84■□□□□ 0.29
PDZD7-204ENST00000474125 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
PDZD7-204ENST00000474125 FBLN2P98095 1184 aa16.82■□□□□ 0.28
PDZD7-204ENST00000474125 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
PDZD7-204ENST00000474125 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
PDZD7-204ENST00000474125 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
PDZD7-204ENST00000474125 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
PDZD7-204ENST00000474125 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
PDZD7-204ENST00000474125 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
PDZD7-204ENST00000474125 DNTTIP2Q5QJE6 756 aaKnown RBP16.77■□□□□ 0.28
PDZD7-204ENST00000474125 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.27
PDZD7-204ENST00000474125 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
PDZD7-204ENST00000474125 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
PDZD7-204ENST00000474125 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
PDZD7-204ENST00000474125 PTMAP06454 111 aaKnown RBP16.73■□□□□ 0.27
PDZD7-204ENST00000474125 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
PDZD7-204ENST00000474125 ARID3AQ99856 593 aa16.7■□□□□ 0.26
PDZD7-204ENST00000474125 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
PDZD7-204ENST00000474125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDZD7-204ENST00000474125 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
PDZD7-204ENST00000474125 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
PDZD7-204ENST00000474125 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
PDZD7-204ENST00000474125 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
PDZD7-204ENST00000474125 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
PDZD7-204ENST00000474125 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
PDZD7-204ENST00000474125 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
PDZD7-204ENST00000474125 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
PDZD7-204ENST00000474125 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
PDZD7-204ENST00000474125 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
PDZD7-204ENST00000474125 EEA1Q15075 1411 aa16.59■□□□□ 0.25
PDZD7-204ENST00000474125 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
PDZD7-204ENST00000474125 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
PDZD7-204ENST00000474125 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
PDZD7-204ENST00000474125 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
PDZD7-204ENST00000474125 WIZO95785 1651 aa16.57■□□□□ 0.24
PDZD7-204ENST00000474125 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
PDZD7-204ENST00000474125 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
PDZD7-204ENST00000474125 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
PDZD7-204ENST00000474125 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
PDZD7-204ENST00000474125 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
PDZD7-204ENST00000474125 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
PDZD7-204ENST00000474125 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
PDZD7-204ENST00000474125 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
PDZD7-204ENST00000474125 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
PDZD7-204ENST00000474125 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
PDZD7-204ENST00000474125 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
PDZD7-204ENST00000474125 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
PDZD7-204ENST00000474125 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
PDZD7-204ENST00000474125 MSNP26038 577 aaKnown RBP16.48■□□□□ 0.23
PDZD7-204ENST00000474125 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
PDZD7-204ENST00000474125 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
PDZD7-204ENST00000474125 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
PDZD7-204ENST00000474125 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
PDZD7-204ENST00000474125 TSPY4P0CV99 314 aa16.46■□□□□ 0.23
PDZD7-204ENST00000474125 TSPY10P0CW01 314 aa16.46■□□□□ 0.23
PDZD7-204ENST00000474125 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
PDZD7-204ENST00000474125 SMARCA4P51532 1647 aa16.46■□□□□ 0.22
PDZD7-204ENST00000474125 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
PDZD7-204ENST00000474125 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
PDZD7-204ENST00000474125 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
PDZD7-204ENST00000474125 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
PDZD7-204ENST00000474125 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.22
PDZD7-204ENST00000474125 MSH5O43196 834 aa16.39■□□□□ 0.22
PDZD7-204ENST00000474125 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.21
PDZD7-204ENST00000474125 HSCBQ8IWL3 235 aa16.39■□□□□ 0.21
PDZD7-204ENST00000474125 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
PDZD7-204ENST00000474125 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
PDZD7-204ENST00000474125 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
PDZD7-204ENST00000474125 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
PDZD7-204ENST00000474125 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
PDZD7-204ENST00000474125 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
PDZD7-204ENST00000474125 FOXD1Q16676 465 aa16.34■□□□□ 0.21
PDZD7-204ENST00000474125 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
PDZD7-204ENST00000474125 GSE1Q14687 1217 aa16.33■□□□□ 0.21
PDZD7-204ENST00000474125 ZRSR1Q15695 479 aaKnown RBP16.33■□□□□ 0.2
PDZD7-204ENST00000474125 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
PDZD7-204ENST00000474125 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
PDZD7-204ENST00000474125 PLEKHG5O94827 1062 aa16.3■□□□□ 0.2
PDZD7-204ENST00000474125 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
PDZD7-204ENST00000474125 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
PDZD7-204ENST00000474125 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms