RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 ZNF579Q8NAF0 562 aaKnown RBP17.36■□□□□ 0.37
A1CF-209ENST00000473480 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
A1CF-209ENST00000473480 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
A1CF-209ENST00000473480 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
A1CF-209ENST00000473480 CLCN6P51797 869 aa17.27■□□□□ 0.36
A1CF-209ENST00000473480 PHF12Q96QT6 1004 aa17.26■□□□□ 0.35
A1CF-209ENST00000473480 KIF12Q96FN5 646 aa17.17■□□□□ 0.34
A1CF-209ENST00000473480 GABBR2O75899 941 aa17.16■□□□□ 0.34
A1CF-209ENST00000473480 PYGBP11216 843 aa17.15■□□□□ 0.34
A1CF-209ENST00000473480 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
A1CF-209ENST00000473480 CHRM1P11229 460 aaPredicted RBP17.12■□□□□ 0.33
A1CF-209ENST00000473480 MAP3K13O43283 966 aa17.11■□□□□ 0.33
A1CF-209ENST00000473480 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
A1CF-209ENST00000473480 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
A1CF-209ENST00000473480 PCDHB13Q9Y5F0 798 aa17.07■□□□□ 0.32
A1CF-209ENST00000473480 GALR2O43603 387 aaPredicted RBP17.06■□□□□ 0.32
A1CF-209ENST00000473480 MS4A3Q96HJ5 214 aa17.06■□□□□ 0.32
A1CF-209ENST00000473480 PKD2Q13563 968 aa17.04■□□□□ 0.32
A1CF-209ENST00000473480 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
A1CF-209ENST00000473480 ZNF467Q7Z7K2 595 aaPredicted RBP16.97■□□□□ 0.31
A1CF-209ENST00000473480 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
A1CF-209ENST00000473480 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
A1CF-209ENST00000473480 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
A1CF-209ENST00000473480 DCBLD2Q96PD2 775 aa16.91■□□□□ 0.3
A1CF-209ENST00000473480 ABCC9O60706 1549 aa16.86■□□□□ 0.29
A1CF-209ENST00000473480 RIOK3O14730 519 aaKnown RBP16.85■□□□□ 0.29
A1CF-209ENST00000473480 TIE1P35590 1138 aa16.85■□□□□ 0.29
A1CF-209ENST00000473480 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
A1CF-209ENST00000473480 RNF25Q96BH1 459 aaPredicted RBP16.84■□□□□ 0.29
A1CF-209ENST00000473480 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
A1CF-209ENST00000473480 RGL2O15211 777 aa16.8■□□□□ 0.28
A1CF-209ENST00000473480 PDAP1Q13442 181 aaKnown RBP16.79■□□□□ 0.28
A1CF-209ENST00000473480 BMP2KQ9NSY1 1161 aaPredicted RBP16.79■□□□□ 0.28
A1CF-209ENST00000473480 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
A1CF-209ENST00000473480 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
A1CF-209ENST00000473480 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
A1CF-209ENST00000473480 TTLL13PA6NNM8 815 aa16.76■□□□□ 0.27
A1CF-209ENST00000473480 ATMINO43313 823 aaPredicted RBP16.76■□□□□ 0.27
A1CF-209ENST00000473480 PSEN1P49768 467 aa16.76■□□□□ 0.27
A1CF-209ENST00000473480 TMEM106CQ9BVX2 250 aa16.76■□□□□ 0.27
A1CF-209ENST00000473480 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
A1CF-209ENST00000473480 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
A1CF-209ENST00000473480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
A1CF-209ENST00000473480 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
A1CF-209ENST00000473480 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
A1CF-209ENST00000473480 PELP1Q8IZL8 1130 aaKnown RBP16.64■□□□□ 0.25
A1CF-209ENST00000473480 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
A1CF-209ENST00000473480 SLC39A7Q92504 469 aa16.59■□□□□ 0.25
A1CF-209ENST00000473480 STK25O00506 426 aa16.57■□□□□ 0.24
A1CF-209ENST00000473480 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
A1CF-209ENST00000473480 C7P10643 843 aa16.56■□□□□ 0.24
A1CF-209ENST00000473480 IER5LQ5T953 404 aa16.55■□□□□ 0.24
A1CF-209ENST00000473480 BCL11BQ9C0K0 894 aaPredicted RBP16.55■□□□□ 0.24
A1CF-209ENST00000473480 CABP2Q9NPB3 220 aa16.55■□□□□ 0.24
A1CF-209ENST00000473480 STK24Q9Y6E0 443 aa16.53■□□□□ 0.24
A1CF-209ENST00000473480 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
A1CF-209ENST00000473480 METRNQ9UJH8 293 aa16.52■□□□□ 0.24
A1CF-209ENST00000473480 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
A1CF-209ENST00000473480 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
A1CF-209ENST00000473480 SEC24BO95487 1268 aa16.44■□□□□ 0.22
A1CF-209ENST00000473480 EFCAB3Q8N7B9 438 aa16.44■□□□□ 0.22
A1CF-209ENST00000473480 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
A1CF-209ENST00000473480 PLCG2P16885 1265 aa16.39■□□□□ 0.21
A1CF-209ENST00000473480 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
A1CF-209ENST00000473480 SOX12O15370 315 aa16.38■□□□□ 0.21
A1CF-209ENST00000473480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.213e-8■■■■□ 20.1
A1CF-209ENST00000473480 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
A1CF-209ENST00000473480 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
A1CF-209ENST00000473480 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
A1CF-209ENST00000473480 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
A1CF-209ENST00000473480 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
A1CF-209ENST00000473480 NLRP6P59044 892 aa16.28■□□□□ 0.2
A1CF-209ENST00000473480 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
A1CF-209ENST00000473480 LHX8Q68G74 356 aa16.27■□□□□ 0.2
A1CF-209ENST00000473480 MFRPQ9BY79 579 aa16.26■□□□□ 0.19
A1CF-209ENST00000473480 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
A1CF-209ENST00000473480 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
A1CF-209ENST00000473480 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
A1CF-209ENST00000473480 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
A1CF-209ENST00000473480 MS4A4AQ96JQ5 239 aa16.19■□□□□ 0.18
A1CF-209ENST00000473480 DPY19L2Q6NUT2 758 aa16.18■□□□□ 0.18
A1CF-209ENST00000473480 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
A1CF-209ENST00000473480 RYDENQ9NUL5 291 aaKnown RBP16.18■□□□□ 0.18
A1CF-209ENST00000473480 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
A1CF-209ENST00000473480 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
A1CF-209ENST00000473480 G3V3G9 751 aa16.13■□□□□ 0.17
A1CF-209ENST00000473480 BOLA1Q9Y3E2 137 aa16.11■□□□□ 0.17
A1CF-209ENST00000473480 SCUBE2Q9NQ36 999 aa16.1■□□□□ 0.17
A1CF-209ENST00000473480 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
A1CF-209ENST00000473480 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
A1CF-209ENST00000473480 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
A1CF-209ENST00000473480 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
A1CF-209ENST00000473480 TMEM121BQ9BXQ6 578 aaPredicted RBP16.03■□□□□ 0.16
A1CF-209ENST00000473480 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
A1CF-209ENST00000473480 PPP1R37O75864 691 aa16■□□□□ 0.15
A1CF-209ENST00000473480 EIF2AK3Q9NZJ5 1116 aaKnown RBP16■□□□□ 0.15
A1CF-209ENST00000473480 SPRYD3Q8NCJ5 442 aa15.97■□□□□ 0.15
A1CF-209ENST00000473480 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
A1CF-209ENST00000473480 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
A1CF-209ENST00000473480 CFAP44Q96MT7 982 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms