RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 NUP160Q12769 1436 aa11.13□□□□□ -0.63
SIK3-208ENST00000472648 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
SIK3-208ENST00000472648 ADCY10Q96PN6 1610 aa11.11□□□□□ -0.63
SIK3-208ENST00000472648 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
SIK3-208ENST00000472648 PRG4Q92954 1404 aaPredicted RBP11.08□□□□□ -0.64
SIK3-208ENST00000472648 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
SIK3-208ENST00000472648 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
SIK3-208ENST00000472648 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
SIK3-208ENST00000472648 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.64
SIK3-208ENST00000472648 TOP2BQ02880 1626 aa11□□□□□ -0.65
SIK3-208ENST00000472648 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
SIK3-208ENST00000472648 CUL7Q14999 1698 aa10.98□□□□□ -0.65
SIK3-208ENST00000472648 LMTK3Q96Q04 1460 aa10.98□□□□□ -0.65
SIK3-208ENST00000472648 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
SIK3-208ENST00000472648 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
SIK3-208ENST00000472648 GLI2P10070 1586 aa10.96□□□□□ -0.65
SIK3-208ENST00000472648 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.66
SIK3-208ENST00000472648 MAP3K4Q9Y6R4 1608 aa10.94□□□□□ -0.66
SIK3-208ENST00000472648 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
SIK3-208ENST00000472648 KIF21BO75037 1637 aa10.89□□□□□ -0.67
SIK3-208ENST00000472648 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
SIK3-208ENST00000472648 ASXL2Q76L83 1435 aa10.87□□□□□ -0.67
SIK3-208ENST00000472648 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
SIK3-208ENST00000472648 COL17A1Q9UMD9 1497 aaPredicted RBP10.87□□□□□ -0.67
SIK3-208ENST00000472648 SOCS7O14512 581 aa10.83□□□□□ -0.68
SIK3-208ENST00000472648 KIAA0586Q9BVV6 1533 aa10.83□□□□□ -0.68
SIK3-208ENST00000472648 ZCCHC11Q5TAX3 1644 aaKnown RBP10.82□□□□□ -0.68
SIK3-208ENST00000472648 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
SIK3-208ENST00000472648 PTPRGP23470 1445 aa10.81□□□□□ -0.68
SIK3-208ENST00000472648 CFAP43Q8NDM7 1665 aa10.8□□□□□ -0.68
SIK3-208ENST00000472648 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
SIK3-208ENST00000472648 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
SIK3-208ENST00000472648 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
SIK3-208ENST00000472648 PCF11O94913 1555 aaKnown RBP10.78□□□□□ -0.68
SIK3-208ENST00000472648 SPATA31D1Q6ZQQ2 1576 aa10.77□□□□□ -0.68
SIK3-208ENST00000472648 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.69
SIK3-208ENST00000472648 ILDR2Q71H61 639 aa10.77□□□□□ -0.69
SIK3-208ENST00000472648 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
SIK3-208ENST00000472648 TNIKQ9UKE5 1360 aa10.76□□□□□ -0.69
SIK3-208ENST00000472648 PTPRMP28827 1452 aa10.74□□□□□ -0.69
SIK3-208ENST00000472648 BCORL1Q5H9F3 1711 aa10.74□□□□□ -0.69
SIK3-208ENST00000472648 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
SIK3-208ENST00000472648 IQGAP2Q13576 1575 aa10.73□□□□□ -0.69
SIK3-208ENST00000472648 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
SIK3-208ENST00000472648 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
SIK3-208ENST00000472648 RIMS1Q86UR5 1692 aaKnown RBP10.72□□□□□ -0.69
SIK3-208ENST00000472648 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
SIK3-208ENST00000472648 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
SIK3-208ENST00000472648 CD109Q6YHK3 1445 aa10.67□□□□□ -0.7
SIK3-208ENST00000472648 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
SIK3-208ENST00000472648 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
SIK3-208ENST00000472648 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
SIK3-208ENST00000472648 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
SIK3-208ENST00000472648 KIF27Q86VH2 1401 aa10.61□□□□□ -0.71
SIK3-208ENST00000472648 FER1L4A9Z1Z3 1794 aa10.61□□□□□ -0.71
SIK3-208ENST00000472648 IGF1RP08069 1367 aa10.61□□□□□ -0.71
SIK3-208ENST00000472648 PREX1Q8TCU6 1659 aa10.6□□□□□ -0.71
SIK3-208ENST00000472648 CTTNBP2Q8WZ74 1663 aa10.6□□□□□ -0.71
SIK3-208ENST00000472648 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
SIK3-208ENST00000472648 HSPA2P54652 639 aa10.58□□□□□ -0.72
SIK3-208ENST00000472648 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
SIK3-208ENST00000472648 ABCA9Q8IUA7 1624 aa10.57□□□□□ -0.72
SIK3-208ENST00000472648 ARHGEF40Q8TER5 1519 aa10.57□□□□□ -0.72
SIK3-208ENST00000472648 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
SIK3-208ENST00000472648 FRMPD1Q5SYB0 1578 aa10.56□□□□□ -0.72
SIK3-208ENST00000472648 CARMIL1Q5VZK9 1371 aa10.56□□□□□ -0.72
SIK3-208ENST00000472648 STRCQ7RTU9 1775 aa10.56□□□□□ -0.72
SIK3-208ENST00000472648 ABCA8O94911 1581 aa10.54□□□□□ -0.72
SIK3-208ENST00000472648 RICTORQ6R327 1708 aa10.54□□□□□ -0.72
SIK3-208ENST00000472648 PLPPR3Q6T4P5 718 aa10.53□□□□□ -0.72
SIK3-208ENST00000472648 PHLDB1Q86UU1 1377 aa10.52□□□□□ -0.72
SIK3-208ENST00000472648 TTC37Q6PGP7 1564 aa10.52□□□□□ -0.72
SIK3-208ENST00000472648 SIGLEC1Q9BZZ2 1709 aa10.51□□□□□ -0.73
SIK3-208ENST00000472648 FANCAO15360 1455 aa10.5□□□□□ -0.73
SIK3-208ENST00000472648 NEO1Q92859 1461 aa10.5□□□□□ -0.73
SIK3-208ENST00000472648 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
SIK3-208ENST00000472648 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
SIK3-208ENST00000472648 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
SIK3-208ENST00000472648 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
SIK3-208ENST00000472648 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
SIK3-208ENST00000472648 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
SIK3-208ENST00000472648 RAPGEF2Q9Y4G8 1499 aa10.45□□□□□ -0.74
SIK3-208ENST00000472648 YEATS2Q9ULM3 1422 aa10.45□□□□□ -0.74
SIK3-208ENST00000472648 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
SIK3-208ENST00000472648 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
SIK3-208ENST00000472648 IQSEC2Q5JU85 1478 aa10.44□□□□□ -0.74
SIK3-208ENST00000472648 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
SIK3-208ENST00000472648 ZFYVE16Q7Z3T8 1539 aa10.43□□□□□ -0.74
SIK3-208ENST00000472648 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
SIK3-208ENST00000472648 LTBP4Q8N2S1 1624 aa10.41□□□□□ -0.74
SIK3-208ENST00000472648 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
SIK3-208ENST00000472648 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
SIK3-208ENST00000472648 ATP10BO94823 1461 aa10.39□□□□□ -0.75
SIK3-208ENST00000472648 RAPGEF6Q8TEU7 1601 aa10.39□□□□□ -0.75
SIK3-208ENST00000472648 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
SIK3-208ENST00000472648 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
SIK3-208ENST00000472648 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
SIK3-208ENST00000472648 C3P01024 1663 aa10.38□□□□□ -0.75
SIK3-208ENST00000472648 ARID3CA6NKF2 412 aa10.38□□□□□ -0.75
SIK3-208ENST00000472648 MLECQ14165 292 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms