RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 JPH4Q96JJ6 628 aa25.16■■□□□ 1.62
SMURF1-203ENST00000472627 ABCC10Q5T3U5 1492 aa25.15■■□□□ 1.62
SMURF1-203ENST00000472627 MAPKBP1O60336 1514 aa25.11■■□□□ 1.61
SMURF1-203ENST00000472627 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
SMURF1-203ENST00000472627 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
SMURF1-203ENST00000472627 KDM6BO15054 1643 aa25.02■■□□□ 1.6
SMURF1-203ENST00000472627 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
SMURF1-203ENST00000472627 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
SMURF1-203ENST00000472627 KDM4FA0A1W2PPD8 638 aa24.93■■□□□ 1.58
SMURF1-203ENST00000472627 KIAA0586Q9BVV6 1533 aa24.88■■□□□ 1.57
SMURF1-203ENST00000472627 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
SMURF1-203ENST00000472627 ILDR1Q86SU0 546 aaPredicted RBP24.8■■□□□ 1.56
SMURF1-203ENST00000472627 PTPRGP23470 1445 aa24.78■■□□□ 1.56
SMURF1-203ENST00000472627 CUL7Q14999 1698 aa24.77■■□□□ 1.56
SMURF1-203ENST00000472627 KIF27Q86VH2 1401 aa24.75■■□□□ 1.55
SMURF1-203ENST00000472627 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
SMURF1-203ENST00000472627 PLB1Q6P1J6 1458 aa24.72■■□□□ 1.55
SMURF1-203ENST00000472627 ABCC2Q92887 1545 aa24.71■■□□□ 1.55
SMURF1-203ENST00000472627 IGF1RP08069 1367 aa24.71■■□□□ 1.55
SMURF1-203ENST00000472627 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
SMURF1-203ENST00000472627 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
SMURF1-203ENST00000472627 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
SMURF1-203ENST00000472627 GLI2P10070 1586 aa24.67■■□□□ 1.54
SMURF1-203ENST00000472627 ADGRL1O94910 1474 aa24.67■■□□□ 1.54
SMURF1-203ENST00000472627 UHRF1BP1LA0JNW5 1464 aa24.6■■□□□ 1.53
SMURF1-203ENST00000472627 TEX14Q8IWB6 1497 aa24.6■■□□□ 1.53
SMURF1-203ENST00000472627 CARMIL1Q5VZK9 1371 aa24.58■■□□□ 1.53
SMURF1-203ENST00000472627 PPRC1Q5VV67 1664 aaKnown RBP24.58■■□□□ 1.53
SMURF1-203ENST00000472627 UACAQ9BZF9 1416 aa24.57■■□□□ 1.52
SMURF1-203ENST00000472627 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
SMURF1-203ENST00000472627 EPRSP07814 1512 aaKnown RBP24.51■■□□□ 1.51
SMURF1-203ENST00000472627 HECW2Q9P2P5 1572 aa24.5■■□□□ 1.51
SMURF1-203ENST00000472627 MAP3K4Q9Y6R4 1608 aa24.5■■□□□ 1.51
SMURF1-203ENST00000472627 KDM5BQ9UGL1 1544 aa24.48■■□□□ 1.51
SMURF1-203ENST00000472627 COL17A1Q9UMD9 1497 aaPredicted RBP24.45■■□□□ 1.51
SMURF1-203ENST00000472627 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
SMURF1-203ENST00000472627 ZCCHC11Q5TAX3 1644 aaKnown RBP24.4■■□□□ 1.5
SMURF1-203ENST00000472627 WDR7Q9Y4E6 1490 aa24.37■■□□□ 1.49
SMURF1-203ENST00000472627 UGGT2Q9NYU1 1516 aa24.36■■□□□ 1.49
SMURF1-203ENST00000472627 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
SMURF1-203ENST00000472627 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
SMURF1-203ENST00000472627 CD109Q6YHK3 1445 aa24.28■■□□□ 1.48
SMURF1-203ENST00000472627 MAGI3Q5TCQ9 1506 aa24.28■■□□□ 1.48
SMURF1-203ENST00000472627 CFAP43Q8NDM7 1665 aa24.26■■□□□ 1.47
SMURF1-203ENST00000472627 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
SMURF1-203ENST00000472627 FBXO41Q8TF61 875 aa24.21■■□□□ 1.47
SMURF1-203ENST00000472627 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
SMURF1-203ENST00000472627 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
SMURF1-203ENST00000472627 KIF21BO75037 1637 aa24.14■■□□□ 1.46
SMURF1-203ENST00000472627 ABCA8O94911 1581 aa24.12■■□□□ 1.45
SMURF1-203ENST00000472627 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
SMURF1-203ENST00000472627 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
SMURF1-203ENST00000472627 PHLDB1Q86UU1 1377 aa24.08■■□□□ 1.45
SMURF1-203ENST00000472627 PTPRMP28827 1452 aa24.04■■□□□ 1.44
SMURF1-203ENST00000472627 ADAMTSL3P82987 1691 aa23.98■■□□□ 1.43
SMURF1-203ENST00000472627 ARID4BQ4LE39 1312 aaPredicted RBP23.95■■□□□ 1.42
SMURF1-203ENST00000472627 NEO1Q92859 1461 aa23.94■■□□□ 1.42
SMURF1-203ENST00000472627 ABCA9Q8IUA7 1624 aa23.94■■□□□ 1.42
SMURF1-203ENST00000472627 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
SMURF1-203ENST00000472627 PCF11O94913 1555 aaKnown RBP23.93■■□□□ 1.42
SMURF1-203ENST00000472627 ATP10BO94823 1461 aa23.91■■□□□ 1.42
SMURF1-203ENST00000472627 RAPGEF3O95398 923 aa23.9■■□□□ 1.42
SMURF1-203ENST00000472627 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
SMURF1-203ENST00000472627 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
SMURF1-203ENST00000472627 MADDQ8WXG6 1647 aa23.86■■□□□ 1.41
SMURF1-203ENST00000472627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
SMURF1-203ENST00000472627 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
SMURF1-203ENST00000472627 LMTK3Q96Q04 1460 aa23.85■■□□□ 1.41
SMURF1-203ENST00000472627 P3H3Q8IVL6 736 aa23.83■■□□□ 1.41
SMURF1-203ENST00000472627 POGZQ7Z3K3 1410 aa23.8■■□□□ 1.4
SMURF1-203ENST00000472627 ARHGEF40Q8TER5 1519 aa23.79■■□□□ 1.4
SMURF1-203ENST00000472627 FRMPD1Q5SYB0 1578 aa23.78■■□□□ 1.4
SMURF1-203ENST00000472627 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
SMURF1-203ENST00000472627 DENND4BO75064 1496 aaPredicted RBP23.76■■□□□ 1.39
SMURF1-203ENST00000472627 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
SMURF1-203ENST00000472627 FANCAO15360 1455 aa23.75■■□□□ 1.39
SMURF1-203ENST00000472627 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
SMURF1-203ENST00000472627 CFAP74Q9C0B2 1584 aa23.73■■□□□ 1.39
SMURF1-203ENST00000472627 SAMD9Q5K651 1589 aa23.72■■□□□ 1.39
SMURF1-203ENST00000472627 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
SMURF1-203ENST00000472627 HSPA2P54652 639 aa23.69■■□□□ 1.38
SMURF1-203ENST00000472627 FHOD3Q2V2M9 1422 aa23.68■■□□□ 1.38
SMURF1-203ENST00000472627 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
SMURF1-203ENST00000472627 CERKQ8TCT0 537 aa23.67■■□□□ 1.38
SMURF1-203ENST00000472627 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
SMURF1-203ENST00000472627 RICTORQ6R327 1708 aa23.66■■□□□ 1.38
SMURF1-203ENST00000472627 NUP153P49790 1475 aaKnown RBP23.66■■□□□ 1.38
SMURF1-203ENST00000472627 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.38
SMURF1-203ENST00000472627 MAGI2Q86UL8 1455 aa23.64■■□□□ 1.38
SMURF1-203ENST00000472627 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.37
SMURF1-203ENST00000472627 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
SMURF1-203ENST00000472627 MLECQ14165 292 aa23.56■■□□□ 1.36
SMURF1-203ENST00000472627 FER1L4A9Z1Z3 1794 aa23.55■■□□□ 1.36
SMURF1-203ENST00000472627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■■□□□ 12.3
SMURF1-203ENST00000472627 TTC37Q6PGP7 1564 aa23.55■■□□□ 1.36
SMURF1-203ENST00000472627 YEATS2Q9ULM3 1422 aa23.54■■□□□ 1.36
SMURF1-203ENST00000472627 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
SMURF1-203ENST00000472627 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
SMURF1-203ENST00000472627 DISP3Q9P2K9 1392 aa23.52■■□□□ 1.36
SMURF1-203ENST00000472627 HECW1Q76N89 1606 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms