RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ABCA10Q8WWZ4 1543 aa19.13■□□□□ 0.65
CDHR3-209ENST00000472116 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
CDHR3-209ENST00000472116 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
CDHR3-209ENST00000472116 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
CDHR3-209ENST00000472116 FOXD1Q16676 465 aa19.1■□□□□ 0.65
CDHR3-209ENST00000472116 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
CDHR3-209ENST00000472116 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
CDHR3-209ENST00000472116 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
CDHR3-209ENST00000472116 ADGRL1O94910 1474 aa18.99■□□□□ 0.63
CDHR3-209ENST00000472116 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
CDHR3-209ENST00000472116 JPH4Q96JJ6 628 aa18.96■□□□□ 0.63
CDHR3-209ENST00000472116 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
CDHR3-209ENST00000472116 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
CDHR3-209ENST00000472116 FBXO41Q8TF61 875 aa18.88■□□□□ 0.61
CDHR3-209ENST00000472116 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
CDHR3-209ENST00000472116 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
CDHR3-209ENST00000472116 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
CDHR3-209ENST00000472116 TOP2BQ02880 1626 aa18.76■□□□□ 0.59
CDHR3-209ENST00000472116 GLI2P10070 1586 aa18.74■□□□□ 0.59
CDHR3-209ENST00000472116 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
CDHR3-209ENST00000472116 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
CDHR3-209ENST00000472116 CUL7Q14999 1698 aa18.69■□□□□ 0.58
CDHR3-209ENST00000472116 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
CDHR3-209ENST00000472116 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
CDHR3-209ENST00000472116 KIAA0586Q9BVV6 1533 aa18.67■□□□□ 0.58
CDHR3-209ENST00000472116 PTPRGP23470 1445 aa18.66■□□□□ 0.58
CDHR3-209ENST00000472116 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
CDHR3-209ENST00000472116 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
CDHR3-209ENST00000472116 MAP3K4Q9Y6R4 1608 aa18.64■□□□□ 0.57
CDHR3-209ENST00000472116 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
CDHR3-209ENST00000472116 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.57
CDHR3-209ENST00000472116 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
CDHR3-209ENST00000472116 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
CDHR3-209ENST00000472116 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
CDHR3-209ENST00000472116 KIF21BO75037 1637 aa18.51■□□□□ 0.55
CDHR3-209ENST00000472116 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
CDHR3-209ENST00000472116 ZCCHC11Q5TAX3 1644 aaKnown RBP18.48■□□□□ 0.55
CDHR3-209ENST00000472116 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
CDHR3-209ENST00000472116 SOCS7O14512 581 aa18.44■□□□□ 0.54
CDHR3-209ENST00000472116 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
CDHR3-209ENST00000472116 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
CDHR3-209ENST00000472116 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
CDHR3-209ENST00000472116 PTPRMP28827 1452 aa18.39■□□□□ 0.54
CDHR3-209ENST00000472116 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
CDHR3-209ENST00000472116 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
CDHR3-209ENST00000472116 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
CDHR3-209ENST00000472116 IGF1RP08069 1367 aa18.38■□□□□ 0.53
CDHR3-209ENST00000472116 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
CDHR3-209ENST00000472116 MAGI3Q5TCQ9 1506 aa18.37■□□□□ 0.53
CDHR3-209ENST00000472116 ADAMTSL3P82987 1691 aa18.36■□□□□ 0.53
CDHR3-209ENST00000472116 ILDR2Q71H61 639 aa18.32■□□□□ 0.52
CDHR3-209ENST00000472116 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
CDHR3-209ENST00000472116 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
CDHR3-209ENST00000472116 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
CDHR3-209ENST00000472116 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
CDHR3-209ENST00000472116 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
CDHR3-209ENST00000472116 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.52
CDHR3-209ENST00000472116 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
CDHR3-209ENST00000472116 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
CDHR3-209ENST00000472116 KIAA0556O60303 1618 aa18.25■□□□□ 0.51
CDHR3-209ENST00000472116 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
CDHR3-209ENST00000472116 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
CDHR3-209ENST00000472116 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
CDHR3-209ENST00000472116 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
CDHR3-209ENST00000472116 HSPA2P54652 639 aa18.18■□□□□ 0.5
CDHR3-209ENST00000472116 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
CDHR3-209ENST00000472116 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
CDHR3-209ENST00000472116 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
CDHR3-209ENST00000472116 ABCA8O94911 1581 aa18.1■□□□□ 0.49
CDHR3-209ENST00000472116 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
CDHR3-209ENST00000472116 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
CDHR3-209ENST00000472116 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
CDHR3-209ENST00000472116 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
CDHR3-209ENST00000472116 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
CDHR3-209ENST00000472116 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
CDHR3-209ENST00000472116 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
CDHR3-209ENST00000472116 NEO1Q92859 1461 aa18.06■□□□□ 0.48
CDHR3-209ENST00000472116 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
CDHR3-209ENST00000472116 MSH5O43196 834 aa18.04■□□□□ 0.48
CDHR3-209ENST00000472116 FER1L4A9Z1Z3 1794 aa18.03■□□□□ 0.48
CDHR3-209ENST00000472116 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
CDHR3-209ENST00000472116 FANCAO15360 1455 aa18.02■□□□□ 0.48
CDHR3-209ENST00000472116 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CDHR3-209ENST00000472116 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
CDHR3-209ENST00000472116 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
CDHR3-209ENST00000472116 RICTORQ6R327 1708 aa17.96■□□□□ 0.47
CDHR3-209ENST00000472116 AKNAQ7Z591 1439 aa17.95■□□□□ 0.46
CDHR3-209ENST00000472116 TTC37Q6PGP7 1564 aa17.95■□□□□ 0.46
CDHR3-209ENST00000472116 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
CDHR3-209ENST00000472116 DENND4BO75064 1496 aaPredicted RBP17.94■□□□□ 0.46
CDHR3-209ENST00000472116 CFAP74Q9C0B2 1584 aa17.92■□□□□ 0.46
CDHR3-209ENST00000472116 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
CDHR3-209ENST00000472116 EFCAB5A4FU69 1503 aa17.92■□□□□ 0.46
CDHR3-209ENST00000472116 ATP10BO94823 1461 aa17.91■□□□□ 0.46
CDHR3-209ENST00000472116 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
CDHR3-209ENST00000472116 ZFYVE16Q7Z3T8 1539 aa17.9■□□□□ 0.46
CDHR3-209ENST00000472116 MLECQ14165 292 aa17.9■□□□□ 0.46
CDHR3-209ENST00000472116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
CDHR3-209ENST00000472116 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
CDHR3-209ENST00000472116 ZMYM4Q5VZL5 1548 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms