RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 ASTLQ6HA08 431 aaPredicted RBP6.41□□□□□ -1.38
DMD-219ENST00000471779 CREBZFQ9NS37 354 aa6.39□□□□□ -1.39
DMD-219ENST00000471779 ATXN8OSP0DMR3 200 aa6.38□□□□□ -1.39
DMD-219ENST00000471779 SPNS2Q8IVW8 549 aa6.38□□□□□ -1.39
DMD-219ENST00000471779 NISCHQ9Y2I1 1504 aa6.37□□□□□ -1.39
DMD-219ENST00000471779 MS4A3Q96HJ5 214 aa6.37□□□□□ -1.39
DMD-219ENST00000471779 SLC4A1APQ9BWU0 796 aaKnown RBP6.36□□□□□ -1.39
DMD-219ENST00000471779 POTEFA5A3E0 1075 aa6.32□□□□□ -1.4
DMD-219ENST00000471779 ZBTB22O15209 634 aa6.32□□□□□ -1.4
DMD-219ENST00000471779 ATN1P54259 1190 aaPredicted RBP6.32□□□□□ -1.4
DMD-219ENST00000471779 ST18O60284 1047 aa6.31□□□□□ -1.4
DMD-219ENST00000471779 NPM1P06748 294 aaKnown RBP eCLIP6.22□□□□□ -1.41
DMD-219ENST00000471779 SLAIN1Q8ND83 568 aa6.22□□□□□ -1.41
DMD-219ENST00000471779 COLQQ9Y215 455 aaPredicted RBP6.22□□□□□ -1.41
DMD-219ENST00000471779 SEC24BO95487 1268 aa6.21□□□□□ -1.42
DMD-219ENST00000471779 BMP2KQ9NSY1 1161 aaPredicted RBP6.21□□□□□ -1.42
DMD-219ENST00000471779 TRPC6Q9Y210 931 aa6.19□□□□□ -1.42
DMD-219ENST00000471779 MARVELD3Q96A59 401 aa6.18□□□□□ -1.42
DMD-219ENST00000471779 STAG3Q9UJ98 1225 aa6.18□□□□□ -1.42
DMD-219ENST00000471779 MNX1P50219 401 aaPredicted RBP6.17□□□□□ -1.42
DMD-219ENST00000471779 TSPYL2Q9H2G4 693 aaPredicted RBP6.16□□□□□ -1.42
DMD-219ENST00000471779 TMEM121BQ9BXQ6 578 aaPredicted RBP6.13□□□□□ -1.43
DMD-219ENST00000471779 KIF12Q96FN5 646 aa6.12□□□□□ -1.43
DMD-219ENST00000471779 TIE1P35590 1138 aa6.11□□□□□ -1.43
DMD-219ENST00000471779 CCDC61Q9Y6R9 512 aa6.11□□□□□ -1.43
DMD-219ENST00000471779 TTLL13PA6NNM8 815 aa6.09□□□□□ -1.43
DMD-219ENST00000471779 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
DMD-219ENST00000471779 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
DMD-219ENST00000471779 MAP3K13O43283 966 aa6.07□□□□□ -1.44
DMD-219ENST00000471779 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
DMD-219ENST00000471779 EMP3P54852 163 aa6.05□□□□□ -1.44
DMD-219ENST00000471779 IER5LQ5T953 404 aa6.05□□□□□ -1.44
DMD-219ENST00000471779 SNPHO15079 494 aa6.04□□□□□ -1.44
DMD-219ENST00000471779 POTEB3A0JP26 581 aa6.03□□□□□ -1.44
DMD-219ENST00000471779 POTEBQ6S5H4 581 aa6.03□□□□□ -1.44
DMD-219ENST00000471779 HS3ST6Q96QI5 342 aa6.03□□□□□ -1.44
DMD-219ENST00000471779 FAM205CA6NFA0 338 aa6.01□□□□□ -1.45
DMD-219ENST00000471779 PLCG2P16885 1265 aa6.01□□□□□ -1.45
DMD-219ENST00000471779 RNF166Q96A37 237 aaPredicted RBP5.99□□□□□ -1.45
DMD-219ENST00000471779 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.97□□□□□ -1.45
DMD-219ENST00000471779 SPDYE4A6NLX3 237 aa5.93□□□□□ -1.46
DMD-219ENST00000471779 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
DMD-219ENST00000471779 PCDHB13Q9Y5F0 798 aa5.92□□□□□ -1.46
DMD-219ENST00000471779 TMEM106CQ9BVX2 250 aa5.91□□□□□ -1.46
DMD-219ENST00000471779 RASEFQ8IZ41 740 aa5.9□□□□□ -1.46
DMD-219ENST00000471779 MYT1LQ9UL68 1186 aa5.89□□□□□ -1.47
DMD-219ENST00000471779 OCEL1Q9H607 264 aa5.88□□□□□ -1.47
DMD-219ENST00000471779 IFNL1Q8IU54 200 aa5.87□□□□□ -1.47
DMD-219ENST00000471779 C3orf67Q6ZVT6 689 aa5.85□□□□□ -1.47
DMD-219ENST00000471779 SGIP1Q9BQI5 828 aa5.85□□□□□ -1.47
DMD-219ENST00000471779 ERBB3P21860 1342 aa5.79□□□□□ -1.48
DMD-219ENST00000471779 PLEKHG5O94827 1062 aa5.76□□□□□ -1.49
DMD-219ENST00000471779 EHMT2Q96KQ7 1210 aa5.76□□□□□ -1.49
DMD-219ENST00000471779 VARS2Q5ST30 1063 aaKnown RBP5.75□□□□□ -1.49
DMD-219ENST00000471779 PDCD7Q8N8D1 485 aaKnown RBP5.75□□□□□ -1.49
DMD-219ENST00000471779 PLA2G2EQ9NZK7 142 aa5.75□□□□□ -1.49
DMD-219ENST00000471779 HOXB3P14651 431 aaPredicted RBP5.74□□□□□ -1.49
DMD-219ENST00000471779 MIER1Q8N108 512 aa5.74□□□□□ -1.49
DMD-219ENST00000471779 HOXB1P14653 301 aaPredicted RBP5.73□□□□□ -1.49
DMD-219ENST00000471779 ZNF710Q8N1W2 664 aa5.73□□□□□ -1.49
DMD-219ENST00000471779 L3MBTL3Q96JM7 780 aaPredicted RBP5.73□□□□□ -1.49
DMD-219ENST00000471779 PTGER2P43116 358 aa5.71□□□□□ -1.5
DMD-219ENST00000471779 ANKRD13DQ6ZTN6 518 aa5.68□□□□□ -1.5
DMD-219ENST00000471779 NUBP1P53384 320 aa5.67□□□□□ -1.5
DMD-219ENST00000471779 ZNF687Q8N1G0 1237 aa5.67□□□□□ -1.5
DMD-219ENST00000471779 PCDHB8Q9UN66 801 aa5.66□□□□□ -1.5
DMD-219ENST00000471779 MKRN3Q13064 507 aaKnown RBP5.65□□□□□ -1.5
DMD-219ENST00000471779 DOK7Q18PE1 504 aa5.65□□□□□ -1.5
DMD-219ENST00000471779 FAM212AQ96EL1 285 aa5.65□□□□□ -1.5
DMD-219ENST00000471779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.65□□□□□ -1.5
DMD-219ENST00000471779 PYGBP11216 843 aa5.64□□□□□ -1.51
DMD-219ENST00000471779 GOLGA2Q08379 1002 aa5.64□□□□□ -1.51
DMD-219ENST00000471779 PROM2Q8N271 834 aa5.63□□□□□ -1.51
DMD-219ENST00000471779 DPY19L2Q6NUT2 758 aa5.62□□□□□ -1.51
DMD-219ENST00000471779 PLCD3Q8N3E9 789 aa5.62□□□□□ -1.51
DMD-219ENST00000471779 RIMBP2O15034 1052 aa5.61□□□□□ -1.51
DMD-219ENST00000471779 CSRNP3Q8WYN3 585 aa5.61□□□□□ -1.51
DMD-219ENST00000471779 IRX2Q9BZI1 471 aaPredicted RBP5.6□□□□□ -1.51
DMD-219ENST00000471779 G3V3G9 751 aa5.59□□□□□ -1.51
DMD-219ENST00000471779 DCAF8Q5TAQ9 597 aa5.59□□□□□ -1.51
DMD-219ENST00000471779 HCSTQ9UBK5 93 aa5.59□□□□□ -1.51
DMD-219ENST00000471779 LSM11P83369 360 aaKnown RBP eCLIP5.58□□□□□ -1.52
DMD-219ENST00000471779 CCDC180Q9P1Z9 1646 aa5.58□□□□□ -1.52
DMD-219ENST00000471779 BOLA1Q9Y3E2 137 aa5.57□□□□□ -1.52
DMD-219ENST00000471779 ZBTB47Q9UFB7 747 aaPredicted RBP5.56□□□□□ -1.52
DMD-219ENST00000471779 DCAF8L2P0C7V8 631 aa5.55□□□□□ -1.52
DMD-219ENST00000471779 GPR153Q6NV75 609 aa5.53□□□□□ -1.52
DMD-219ENST00000471779 ILDR1Q86SU0 546 aaPredicted RBP5.52□□□□□ -1.53
DMD-219ENST00000471779 ZSWIM6Q9HCJ5 1215 aa5.52□□□□□ -1.53
DMD-219ENST00000471779 ABCC9O60706 1549 aa5.51□□□□□ -1.53
DMD-219ENST00000471779 ARSIQ5FYB1 569 aa5.49□□□□□ -1.53
DMD-219ENST00000471779 ZNF316A6NFI3 1004 aaPredicted RBP5.48□□□□□ -1.53
DMD-219ENST00000471779 PSEN1P49768 467 aa5.48□□□□□ -1.53
DMD-219ENST00000471779 ZNF467Q7Z7K2 595 aaPredicted RBP5.48□□□□□ -1.53
DMD-219ENST00000471779 AXIN2Q9Y2T1 843 aa5.48□□□□□ -1.53
DMD-219ENST00000471779 Q6ZNB5 142 aa5.47□□□□□ -1.53
DMD-219ENST00000471779 KHSRPQ92945 711 aaKnown RBP eCLIP5.47□□□□□ -1.53
DMD-219ENST00000471779 RGS20O76081 388 aa5.46□□□□□ -1.54
DMD-219ENST00000471779 POTEEQ6S8J3 1075 aa5.46□□□□□ -1.54
DMD-219ENST00000471779 TMEM92Q6UXU6 159 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms