RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ACIN1Q9UKV3 1341 aaKnown RBP9.14□□□□□ -0.95
BRCA1-210ENST00000471181 NACADO15069 1562 aa9.14□□□□□ -0.95
BRCA1-210ENST00000471181 BECN1Q14457 450 aa9.12□□□□□ -0.95
BRCA1-210ENST00000471181 WDR43Q15061 677 aaKnown RBP eCLIP9.12□□□□□ -0.95
BRCA1-210ENST00000471181 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
BRCA1-210ENST00000471181 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
BRCA1-210ENST00000471181 GOLGA6L6A8MZA4 724 aa9.11□□□□□ -0.95
BRCA1-210ENST00000471181 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-210ENST00000471181 DDRGK1Q96HY6 314 aa9.08□□□□□ -0.96
BRCA1-210ENST00000471181 SENP3Q9H4L4 574 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-210ENST00000471181 ANP32EQ9BTT0 268 aa9.07□□□□□ -0.96
BRCA1-210ENST00000471181 NPHP1O15259 732 aa9.07□□□□□ -0.96
BRCA1-210ENST00000471181 BICRAQ9NZM4 1560 aa9.06□□□□□ -0.96
BRCA1-210ENST00000471181 CASC1Q6TDU7 716 aa9.06□□□□□ -0.96
BRCA1-210ENST00000471181 NAP1L2Q9ULW6 460 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-210ENST00000471181 TMC1Q8TDI8 760 aa9.05□□□□□ -0.96
BRCA1-210ENST00000471181 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
BRCA1-210ENST00000471181 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-210ENST00000471181 PDE4CQ08493 712 aa9.04□□□□□ -0.96
BRCA1-210ENST00000471181 NOC3LQ8WTT2 800 aaKnown RBP9.03□□□□□ -0.96
BRCA1-210ENST00000471181 ARID4BQ4LE39 1312 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-210ENST00000471181 PNNQ9H307 717 aaKnown RBP9.02□□□□□ -0.97
BRCA1-210ENST00000471181 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
BRCA1-210ENST00000471181 NRDCO43847 1150 aa9.01□□□□□ -0.97
BRCA1-210ENST00000471181 CHAF1AQ13111 956 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-210ENST00000471181 ISY1Q9ULR0 285 aaKnown RBP9.01□□□□□ -0.97
BRCA1-210ENST00000471181 FGD1P98174 961 aa9□□□□□ -0.97
BRCA1-210ENST00000471181 ARID3AQ99856 593 aa9□□□□□ -0.97
BRCA1-210ENST00000471181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.971e-6■■■□□ 18.6
BRCA1-210ENST00000471181 DDX10Q13206 875 aaKnown RBP8.99□□□□□ -0.97
BRCA1-210ENST00000471181 DRC7Q8IY82 874 aa8.99□□□□□ -0.97
BRCA1-210ENST00000471181 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
BRCA1-210ENST00000471181 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
BRCA1-210ENST00000471181 TNNT3P45378 269 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-210ENST00000471181 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
BRCA1-210ENST00000471181 LAS1LQ9Y4W2 734 aaKnown RBP8.98□□□□□ -0.97
BRCA1-210ENST00000471181 KIAA2012Q0VF49 1180 aa8.98□□□□□ -0.97
BRCA1-210ENST00000471181 L1TD1Q5T7N2 865 aaKnown RBP8.98□□□□□ -0.97
BRCA1-210ENST00000471181 A0A0U1RQG5 324 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-210ENST00000471181 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
BRCA1-210ENST00000471181 MRS2Q9HD23 443 aa8.96□□□□□ -0.97
BRCA1-210ENST00000471181 HSP90AB1P08238 724 aaKnown RBP8.95□□□□□ -0.98
BRCA1-210ENST00000471181 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
BRCA1-210ENST00000471181 OS9Q13438 667 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-210ENST00000471181 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
BRCA1-210ENST00000471181 KCNJ4P48050 445 aa8.95□□□□□ -0.98
BRCA1-210ENST00000471181 ANO8Q9HCE9 1232 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-210ENST00000471181 SENP3-EIF4A1A0A087X0R7 540 aa8.94□□□□□ -0.98
BRCA1-210ENST00000471181 MSNP26038 577 aaKnown RBP8.94□□□□□ -0.98
BRCA1-210ENST00000471181 CALRP27797 417 aaKnown RBP8.93□□□□□ -0.98
BRCA1-210ENST00000471181 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
BRCA1-210ENST00000471181 KRI1Q8N9T8 703 aaKnown RBP8.92□□□□□ -0.98
BRCA1-210ENST00000471181 PPM1GO15355 546 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-210ENST00000471181 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-210ENST00000471181 GNL2Q13823 731 aaKnown RBP8.9□□□□□ -0.98
BRCA1-210ENST00000471181 ABCC9O60706 1549 aa8.9□□□□□ -0.98
BRCA1-210ENST00000471181 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.99
BRCA1-210ENST00000471181 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
BRCA1-210ENST00000471181 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
BRCA1-210ENST00000471181 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
BRCA1-210ENST00000471181 GOLGA6L1Q8N7Z2 621 aa8.87□□□□□ -0.99
BRCA1-210ENST00000471181 RGS3P49796 1198 aa8.87□□□□□ -0.99
BRCA1-210ENST00000471181 CHIC2Q9UKJ5 165 aa8.86□□□□□ -0.99
BRCA1-210ENST00000471181 NEUROD2Q15784 382 aa8.85□□□□□ -0.99
BRCA1-210ENST00000471181 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
BRCA1-210ENST00000471181 SETQ01105 290 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-210ENST00000471181 HIRIP3Q9BW71 556 aaPredicted RBP8.83□□□□□ -1
BRCA1-210ENST00000471181 HSCBQ8IWL3 235 aa8.83□□□□□ -1
BRCA1-210ENST00000471181 FRAT1Q92837 279 aaPredicted RBP8.83□□□□□ -1
BRCA1-210ENST00000471181 CREBRFQ8IUR6 639 aa8.82□□□□□ -1
BRCA1-210ENST00000471181 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
BRCA1-210ENST00000471181 WWC1Q8IX03 1113 aa8.82□□□□□ -1
BRCA1-210ENST00000471181 NOP58Q9Y2X3 529 aaKnown RBP8.81□□□□□ -1
BRCA1-210ENST00000471181 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
BRCA1-210ENST00000471181 CEP89Q96ST8 783 aa8.8□□□□□ -1
BRCA1-210ENST00000471181 MCCP23508 829 aa8.8□□□□□ -1
BRCA1-210ENST00000471181 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.8□□□□□ -1
BRCA1-210ENST00000471181 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
BRCA1-210ENST00000471181 SCRIBQ14160 1630 aa8.79□□□□□ -1
BRCA1-210ENST00000471181 TPM4P67936 248 aa8.78□□□□□ -1
BRCA1-210ENST00000471181 PABPN1Q86U42 306 aaKnown RBP eCLIP8.78□□□□□ -1
BRCA1-210ENST00000471181 TAF7LQ5H9L4 462 aa8.77□□□□□ -1.01
BRCA1-210ENST00000471181 RASSF8Q8NHQ8 419 aa8.76□□□□□ -1.01
BRCA1-210ENST00000471181 VPS53Q5VIR6 699 aa8.76□□□□□ -1.01
BRCA1-210ENST00000471181 EIF4G2P78344 907 aaKnown RBP eCLIP8.75□□□□□ -1.01
BRCA1-210ENST00000471181 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-210ENST00000471181 APBB1O00213 710 aa8.75□□□□□ -1.01
BRCA1-210ENST00000471181 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
BRCA1-210ENST00000471181 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
BRCA1-210ENST00000471181 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
BRCA1-210ENST00000471181 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
BRCA1-210ENST00000471181 TPM3P06753 285 aa8.73□□□□□ -1.01
BRCA1-210ENST00000471181 PTMSP20962 102 aa8.73□□□□□ -1.01
BRCA1-210ENST00000471181 USP35Q9P2H5 1018 aa8.73□□□□□ -1.01
BRCA1-210ENST00000471181 U2SURPO15042 1029 aaKnown RBP8.73□□□□□ -1.01
BRCA1-210ENST00000471181 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
BRCA1-210ENST00000471181 CNKSR2Q8WXI2 1034 aa8.73□□□□□ -1.01
BRCA1-210ENST00000471181 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-210ENST00000471181 NUDCQ9Y266 331 aa8.73□□□□□ -1.01
BRCA1-210ENST00000471181 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms