RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
GCFC2-205ENST00000470197 KCNV2Q8TDN2 545 aa9.15□□□□□ -0.94
GCFC2-205ENST00000470197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
GCFC2-205ENST00000470197 RNF39Q9H2S5 420 aa9.11□□□□□ -0.95
GCFC2-205ENST00000470197 STK25O00506 426 aa9.11□□□□□ -0.95
GCFC2-205ENST00000470197 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
GCFC2-205ENST00000470197 NUBP1P53384 320 aa9.1□□□□□ -0.95
GCFC2-205ENST00000470197 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
GCFC2-205ENST00000470197 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
GCFC2-205ENST00000470197 TRIM41Q8WV44 630 aa9.06□□□□□ -0.96
GCFC2-205ENST00000470197 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
GCFC2-205ENST00000470197 PODXL2Q9NZ53 605 aa9.04□□□□□ -0.96
GCFC2-205ENST00000470197 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
GCFC2-205ENST00000470197 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
GCFC2-205ENST00000470197 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
GCFC2-205ENST00000470197 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
GCFC2-205ENST00000470197 ZFP91Q96JP5 570 aaPredicted RBP9.03□□□□□ -0.96
GCFC2-205ENST00000470197 SLC24A3Q9HC58 644 aa9.02□□□□□ -0.97
GCFC2-205ENST00000470197 DSG3P32926 999 aa9.01□□□□□ -0.97
GCFC2-205ENST00000470197 ZBTB12Q9Y330 459 aaPredicted RBP9.01□□□□□ -0.97
GCFC2-205ENST00000470197 ZC3H15Q8WU90 426 aaKnown RBP9□□□□□ -0.97
GCFC2-205ENST00000470197 STK24Q9Y6E0 443 aa8.99□□□□□ -0.97
GCFC2-205ENST00000470197 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
GCFC2-205ENST00000470197 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
GCFC2-205ENST00000470197 DCAF8Q5TAQ9 597 aa8.97□□□□□ -0.97
GCFC2-205ENST00000470197 HRCP23327 699 aa8.96□□□□□ -0.97
GCFC2-205ENST00000470197 MNX1P50219 401 aaPredicted RBP8.96□□□□□ -0.97
GCFC2-205ENST00000470197 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
GCFC2-205ENST00000470197 RASEFQ8IZ41 740 aa8.95□□□□□ -0.98
GCFC2-205ENST00000470197 SEMA3EO15041 775 aa8.94□□□□□ -0.98
GCFC2-205ENST00000470197 PYGBP11216 843 aa8.93□□□□□ -0.98
GCFC2-205ENST00000470197 VGFO15240 615 aaPredicted RBP8.92□□□□□ -0.98
GCFC2-205ENST00000470197 GSE1Q14687 1217 aa8.92□□□□□ -0.98
GCFC2-205ENST00000470197 ZBTB47Q9UFB7 747 aaPredicted RBP8.92□□□□□ -0.98
GCFC2-205ENST00000470197 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
GCFC2-205ENST00000470197 GPBP1L1Q9HC44 474 aaPredicted RBP8.9□□□□□ -0.98
GCFC2-205ENST00000470197 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
GCFC2-205ENST00000470197 PPP1R37O75864 691 aa8.86□□□□□ -0.99
GCFC2-205ENST00000470197 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
GCFC2-205ENST00000470197 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
GCFC2-205ENST00000470197 C1QBPQ07021 282 aaKnown RBP8.84□□□□□ -0.99
GCFC2-205ENST00000470197 ZMYND10O75800 440 aa8.82□□□□□ -1
GCFC2-205ENST00000470197 MFRPQ9BY79 579 aa8.82□□□□□ -1
GCFC2-205ENST00000470197 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
GCFC2-205ENST00000470197 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
GCFC2-205ENST00000470197 ARID3AQ99856 593 aa8.8□□□□□ -1
GCFC2-205ENST00000470197 CHRM1P11229 460 aaPredicted RBP8.79□□□□□ -1
GCFC2-205ENST00000470197 FAM212AQ96EL1 285 aa8.79□□□□□ -1
GCFC2-205ENST00000470197 IL27Q8NEV9 243 aa8.78□□□□□ -1
GCFC2-205ENST00000470197 NISCHQ9Y2I1 1504 aa8.78□□□□□ -1
GCFC2-205ENST00000470197 WDR70Q9NW82 654 aa8.78□□□□□ -1
GCFC2-205ENST00000470197 ARID3CA6NKF2 412 aa8.78□□□□□ -1
GCFC2-205ENST00000470197 NCKAP5LQ9HCH0 1330 aa8.74□□□□□ -1.01
GCFC2-205ENST00000470197 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
GCFC2-205ENST00000470197 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
GCFC2-205ENST00000470197 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
GCFC2-205ENST00000470197 ZMYND15Q9H091 742 aa8.72□□□□□ -1.01
GCFC2-205ENST00000470197 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.01
GCFC2-205ENST00000470197 E2F4Q16254 413 aa8.71□□□□□ -1.02
GCFC2-205ENST00000470197 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
GCFC2-205ENST00000470197 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
GCFC2-205ENST00000470197 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
GCFC2-205ENST00000470197 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
GCFC2-205ENST00000470197 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
GCFC2-205ENST00000470197 NPM2Q86SE8 214 aaKnown RBP8.67□□□□□ -1.02
GCFC2-205ENST00000470197 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
GCFC2-205ENST00000470197 FBXO22Q8NEZ5 403 aa8.66□□□□□ -1.02
GCFC2-205ENST00000470197 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
GCFC2-205ENST00000470197 FAM117AQ9C073 453 aa8.64□□□□□ -1.03
GCFC2-205ENST00000470197 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
GCFC2-205ENST00000470197 PHF8Q9UPP1 1060 aa8.62□□□□□ -1.03
GCFC2-205ENST00000470197 TSPYL2Q9H2G4 693 aaPredicted RBP8.61□□□□□ -1.03
GCFC2-205ENST00000470197 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
GCFC2-205ENST00000470197 EFCAB3Q8N7B9 438 aa8.6□□□□□ -1.03
GCFC2-205ENST00000470197 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
GCFC2-205ENST00000470197 RANGAP1P46060 587 aaPredicted RBP8.59□□□□□ -1.03
GCFC2-205ENST00000470197 LARP6Q9BRS8 491 aaKnown RBP8.59□□□□□ -1.04
GCFC2-205ENST00000470197 TRIM66O15016 1216 aa8.58□□□□□ -1.04
GCFC2-205ENST00000470197 APBB1O00213 710 aa8.58□□□□□ -1.04
GCFC2-205ENST00000470197 PDE4DQ08499 809 aa8.57□□□□□ -1.04
GCFC2-205ENST00000470197 MS4A4AQ96JQ5 239 aa8.57□□□□□ -1.04
GCFC2-205ENST00000470197 AK7Q96M32 723 aa8.56□□□□□ -1.04
GCFC2-205ENST00000470197 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
GCFC2-205ENST00000470197 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
GCFC2-205ENST00000470197 PSEN1P49768 467 aa8.55□□□□□ -1.04
GCFC2-205ENST00000470197 GPR37O15354 613 aa8.54□□□□□ -1.04
GCFC2-205ENST00000470197 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
GCFC2-205ENST00000470197 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
GCFC2-205ENST00000470197 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
GCFC2-205ENST00000470197 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
GCFC2-205ENST00000470197 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
GCFC2-205ENST00000470197 IFNL1Q8IU54 200 aa8.52□□□□□ -1.05
GCFC2-205ENST00000470197 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
GCFC2-205ENST00000470197 CCDC61Q9Y6R9 512 aa8.5□□□□□ -1.05
GCFC2-205ENST00000470197 MFSD10Q14728 455 aa8.5□□□□□ -1.05
GCFC2-205ENST00000470197 REM2Q8IYK8 340 aaPredicted RBP8.5□□□□□ -1.05
GCFC2-205ENST00000470197 ZNF467Q7Z7K2 595 aaPredicted RBP8.49□□□□□ -1.05
GCFC2-205ENST00000470197 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
GCFC2-205ENST00000470197 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
GCFC2-205ENST00000470197 ZNF316A6NFI3 1004 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms