RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CFAP44Q96MT7 982 aa8.29□□□□□ -1.08
CCDC144A-212ENST00000470068 P3H3Q8IVL6 736 aa8.29□□□□□ -1.08
CCDC144A-212ENST00000470068 CHMP4BQ9H444 224 aaKnown RBP8.29□□□□□ -1.08
CCDC144A-212ENST00000470068 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 NUTM2AQ8IVF1 878 aaPredicted RBP8.28□□□□□ -1.08
CCDC144A-212ENST00000470068 UPF2Q9HAU5 1272 aaKnown RBP8.27□□□□□ -1.08
CCDC144A-212ENST00000470068 CDCA8Q53HL2 280 aa8.27□□□□□ -1.09
CCDC144A-212ENST00000470068 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.09
CCDC144A-212ENST00000470068 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
CCDC144A-212ENST00000470068 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
CCDC144A-212ENST00000470068 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
CCDC144A-212ENST00000470068 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
CCDC144A-212ENST00000470068 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
CCDC144A-212ENST00000470068 FAM50AQ14320 339 aaKnown RBP8.23□□□□□ -1.09
CCDC144A-212ENST00000470068 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
CCDC144A-212ENST00000470068 BAZ1AQ9NRL2 1556 aaPredicted RBP8.22□□□□□ -1.09
CCDC144A-212ENST00000470068 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
CCDC144A-212ENST00000470068 NPM2Q86SE8 214 aaKnown RBP8.21□□□□□ -1.1
CCDC144A-212ENST00000470068 CEP162Q5TB80 1403 aa8.21□□□□□ -1.1
CCDC144A-212ENST00000470068 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
CCDC144A-212ENST00000470068 DDRGK1Q96HY6 314 aa8.2□□□□□ -1.1
CCDC144A-212ENST00000470068 MS4A1P11836 297 aa8.2□□□□□ -1.1
CCDC144A-212ENST00000470068 CHMP4AQ9BY43 222 aa8.19□□□□□ -1.1
CCDC144A-212ENST00000470068 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
CCDC144A-212ENST00000470068 PLEKHD1A6NEE1 506 aa8.19□□□□□ -1.1
CCDC144A-212ENST00000470068 SMARCA2P51531 1590 aa8.18□□□□□ -1.1
CCDC144A-212ENST00000470068 TOM1O60784 492 aa8.18□□□□□ -1.1
CCDC144A-212ENST00000470068 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
CCDC144A-212ENST00000470068 PNNQ9H307 717 aaKnown RBP8.16□□□□□ -1.1
CCDC144A-212ENST00000470068 CANXP27824 592 aaKnown RBP8.16□□□□□ -1.1
CCDC144A-212ENST00000470068 PTMSP20962 102 aa8.15□□□□□ -1.1
CCDC144A-212ENST00000470068 BAZ1BQ9UIG0 1483 aaKnown RBP8.14□□□□□ -1.11
CCDC144A-212ENST00000470068 NPHP1O15259 732 aa8.14□□□□□ -1.11
CCDC144A-212ENST00000470068 TSPY4P0CV99 314 aa8.13□□□□□ -1.11
CCDC144A-212ENST00000470068 TSPY10P0CW01 314 aa8.13□□□□□ -1.11
CCDC144A-212ENST00000470068 MSH5O43196 834 aa8.13□□□□□ -1.11
CCDC144A-212ENST00000470068 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
CCDC144A-212ENST00000470068 CLIP1P30622 1438 aa8.11□□□□□ -1.11
CCDC144A-212ENST00000470068 ITGAEP38570 1179 aa8.11□□□□□ -1.11
CCDC144A-212ENST00000470068 BECN1Q14457 450 aa8.11□□□□□ -1.11
CCDC144A-212ENST00000470068 EID1Q9Y6B2 187 aa8.11□□□□□ -1.11
CCDC144A-212ENST00000470068 LMTK3Q96Q04 1460 aa8.11□□□□□ -1.11
CCDC144A-212ENST00000470068 FBXO41Q8TF61 875 aa8.1□□□□□ -1.11
CCDC144A-212ENST00000470068 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.11
CCDC144A-212ENST00000470068 GGT6Q6P531 493 aa8.09□□□□□ -1.11
CCDC144A-212ENST00000470068 POLR3GLQ9BT43 218 aa8.09□□□□□ -1.11
CCDC144A-212ENST00000470068 ABCC8Q09428 1581 aa8.08□□□□□ -1.12
CCDC144A-212ENST00000470068 GOLGA6L22H0YM25 854 aa8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 MYH16Q9H6N6 1097 aa8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 ZNF326Q5BKZ1 582 aaKnown RBP8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 LOC105371045A0A1W2PR82 267 aa8.07□□□□□ -1.12
CCDC144A-212ENST00000470068 CFAP53Q96M91 514 aa8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 STAC3Q96MF2 364 aa8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
CCDC144A-212ENST00000470068 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
CCDC144A-212ENST00000470068 ZRANB1Q9UGI0 708 aa8.05□□□□□ -1.12
CCDC144A-212ENST00000470068 HSPA2P54652 639 aa8.05□□□□□ -1.12
CCDC144A-212ENST00000470068 WDR43Q15061 677 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC144A-212ENST00000470068 CCER2I3L3R5 266 aa8.03□□□□□ -1.12
CCDC144A-212ENST00000470068 CASC1Q6TDU7 716 aa8.03□□□□□ -1.12
CCDC144A-212ENST00000470068 HDAC5Q9UQL6 1122 aa8.03□□□□□ -1.12
CCDC144A-212ENST00000470068 PHLDB1Q86UU1 1377 aa8.02□□□□□ -1.13
CCDC144A-212ENST00000470068 NCLP19338 710 aaKnown RBP8.02□□□□□ -1.13
CCDC144A-212ENST00000470068 L1TD1Q5T7N2 865 aaKnown RBP8.02□□□□□ -1.13
CCDC144A-212ENST00000470068 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.13
CCDC144A-212ENST00000470068 CUX2O14529 1486 aa8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 TRIM44Q96DX7 344 aaPredicted RBP8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 JPH4Q96JJ6 628 aa8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 ARXQ96QS3 562 aa8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 USP35Q9P2H5 1018 aa8.01□□□□□ -1.13
CCDC144A-212ENST00000470068 TMC1Q8TDI8 760 aa8□□□□□ -1.13
CCDC144A-212ENST00000470068 ROCK2O75116 1388 aaKnown RBP8□□□□□ -1.13
CCDC144A-212ENST00000470068 ATF3P18847 181 aa8□□□□□ -1.13
CCDC144A-212ENST00000470068 FMN1Q68DA7 1419 aa8□□□□□ -1.13
CCDC144A-212ENST00000470068 HSP90AA1P07900 732 aaKnown RBP8□□□□□ -1.13
CCDC144A-212ENST00000470068 GTF3C3Q9Y5Q9 886 aa8□□□□□ -1.13
CCDC144A-212ENST00000470068 KANK1Q14678 1352 aa8□□□□□ -1.13
CCDC144A-212ENST00000470068 NRDCO43847 1150 aa7.99□□□□□ -1.13
CCDC144A-212ENST00000470068 CALD1Q05682 793 aaKnown RBP7.99□□□□□ -1.13
CCDC144A-212ENST00000470068 CARMIL2Q6F5E8 1435 aa7.98□□□□□ -1.13
CCDC144A-212ENST00000470068 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
CCDC144A-212ENST00000470068 C16orf71Q8IYS4 520 aaPredicted RBP7.98□□□□□ -1.13
CCDC144A-212ENST00000470068 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
CCDC144A-212ENST00000470068 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
CCDC144A-212ENST00000470068 POGZQ7Z3K3 1410 aa7.97□□□□□ -1.13
CCDC144A-212ENST00000470068 NGLY1Q96IV0 654 aa7.96□□□□□ -1.14
CCDC144A-212ENST00000470068 CAPN15O75808 1086 aa7.96□□□□□ -1.14
CCDC144A-212ENST00000470068 AAMPQ13685 434 aa7.96□□□□□ -1.14
CCDC144A-212ENST00000470068 CDK11BP21127 795 aaKnown RBP7.95□□□□□ -1.14
CCDC144A-212ENST00000470068 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms