RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 HSP90AA1P07900 732 aaKnown RBP21.14■□□□□ 0.98
BRAT1-204ENST00000469750 KCNH8Q96L42 1107 aa21.14■□□□□ 0.98
BRAT1-204ENST00000469750 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
BRAT1-204ENST00000469750 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.97
BRAT1-204ENST00000469750 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
BRAT1-204ENST00000469750 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
BRAT1-204ENST00000469750 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
BRAT1-204ENST00000469750 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
BRAT1-204ENST00000469750 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
BRAT1-204ENST00000469750 ANP32BQ92688 251 aaKnown RBP21.01■□□□□ 0.95
BRAT1-204ENST00000469750 CFDP1Q9UEE9 299 aaPredicted RBP21.01■□□□□ 0.95
BRAT1-204ENST00000469750 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
BRAT1-204ENST00000469750 MIER1Q8N108 512 aa20.99■□□□□ 0.95
BRAT1-204ENST00000469750 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
BRAT1-204ENST00000469750 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
BRAT1-204ENST00000469750 RGL3Q3MIN7 710 aa20.97■□□□□ 0.95
BRAT1-204ENST00000469750 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
BRAT1-204ENST00000469750 MYH16Q9H6N6 1097 aa20.9■□□□□ 0.94
BRAT1-204ENST00000469750 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
BRAT1-204ENST00000469750 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
BRAT1-204ENST00000469750 C14orf37Q86TY3 774 aa20.88■□□□□ 0.93
BRAT1-204ENST00000469750 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
BRAT1-204ENST00000469750 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
BRAT1-204ENST00000469750 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
BRAT1-204ENST00000469750 ARID4BQ4LE39 1312 aaPredicted RBP20.84■□□□□ 0.93
BRAT1-204ENST00000469750 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
BRAT1-204ENST00000469750 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.92
BRAT1-204ENST00000469750 A0A0G2JS52 829 aa20.82■□□□□ 0.92
BRAT1-204ENST00000469750 KNSTRNQ9Y448 316 aa20.82■□□□□ 0.92
BRAT1-204ENST00000469750 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
BRAT1-204ENST00000469750 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
BRAT1-204ENST00000469750 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
BRAT1-204ENST00000469750 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
BRAT1-204ENST00000469750 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
BRAT1-204ENST00000469750 CUX2O14529 1486 aa20.7■□□□□ 0.9
BRAT1-204ENST00000469750 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
BRAT1-204ENST00000469750 NBR1Q14596 966 aa20.7■□□□□ 0.9
BRAT1-204ENST00000469750 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
BRAT1-204ENST00000469750 HAP1P54257 671 aaPredicted RBP20.68■□□□□ 0.9
BRAT1-204ENST00000469750 POGKQ9P215 609 aa20.67■□□□□ 0.9
BRAT1-204ENST00000469750 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
BRAT1-204ENST00000469750 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
BRAT1-204ENST00000469750 MAPK8IP3Q9UPT6 1336 aa20.63■□□□□ 0.89
BRAT1-204ENST00000469750 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
BRAT1-204ENST00000469750 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
BRAT1-204ENST00000469750 BECN1Q14457 450 aa20.62■□□□□ 0.89
BRAT1-204ENST00000469750 SOGA1O94964 1423 aa20.61■□□□□ 0.89
BRAT1-204ENST00000469750 ARXQ96QS3 562 aa20.61■□□□□ 0.89
BRAT1-204ENST00000469750 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
BRAT1-204ENST00000469750 NEUROD2Q15784 382 aa20.59■□□□□ 0.89
BRAT1-204ENST00000469750 FTSJ3Q8IY81 847 aaKnown RBP20.59■□□□□ 0.89
BRAT1-204ENST00000469750 KANK1Q14678 1352 aa20.58■□□□□ 0.89
BRAT1-204ENST00000469750 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
BRAT1-204ENST00000469750 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
BRAT1-204ENST00000469750 LAS1LQ9Y4W2 734 aaKnown RBP20.54■□□□□ 0.88
BRAT1-204ENST00000469750 TMF1P82094 1093 aa20.53■□□□□ 0.88
BRAT1-204ENST00000469750 LMOD2Q6P5Q4 547 aa20.53■□□□□ 0.88
BRAT1-204ENST00000469750 TIMELESSQ9UNS1 1208 aa20.53■□□□□ 0.88
BRAT1-204ENST00000469750 TNNT2P45379 298 aaPredicted RBP20.52■□□□□ 0.88
BRAT1-204ENST00000469750 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
BRAT1-204ENST00000469750 NCLP19338 710 aaKnown RBP20.5■□□□□ 0.87
BRAT1-204ENST00000469750 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
BRAT1-204ENST00000469750 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
BRAT1-204ENST00000469750 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
BRAT1-204ENST00000469750 GOLGA6L22H0YM25 854 aa20.48■□□□□ 0.87
BRAT1-204ENST00000469750 HDGFP51858 240 aaKnown RBP20.48■□□□□ 0.87
BRAT1-204ENST00000469750 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
BRAT1-204ENST00000469750 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
BRAT1-204ENST00000469750 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
BRAT1-204ENST00000469750 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
BRAT1-204ENST00000469750 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
BRAT1-204ENST00000469750 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
BRAT1-204ENST00000469750 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
BRAT1-204ENST00000469750 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
BRAT1-204ENST00000469750 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
BRAT1-204ENST00000469750 CHMP4BQ9H444 224 aaKnown RBP20.44■□□□□ 0.86
BRAT1-204ENST00000469750 MLECQ14165 292 aa20.44■□□□□ 0.86
BRAT1-204ENST00000469750 MS4A1P11836 297 aa20.42■□□□□ 0.86
BRAT1-204ENST00000469750 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
BRAT1-204ENST00000469750 SRPK2P78362 688 aaKnown RBP20.4■□□□□ 0.86
BRAT1-204ENST00000469750 PKD2Q13563 968 aa20.4■□□□□ 0.86
BRAT1-204ENST00000469750 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
BRAT1-204ENST00000469750 CDK11BP21127 795 aaKnown RBP20.39■□□□□ 0.86
BRAT1-204ENST00000469750 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
BRAT1-204ENST00000469750 GGT6Q6P531 493 aa20.39■□□□□ 0.85
BRAT1-204ENST00000469750 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
BRAT1-204ENST00000469750 KANK4Q5T7N3 995 aaPredicted RBP20.37■□□□□ 0.85
BRAT1-204ENST00000469750 RGS3P49796 1198 aa20.37■□□□□ 0.85
BRAT1-204ENST00000469750 FMN1Q68DA7 1419 aa20.37■□□□□ 0.85
BRAT1-204ENST00000469750 MORC1Q86VD1 984 aa20.36■□□□□ 0.85
BRAT1-204ENST00000469750 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
BRAT1-204ENST00000469750 SAFB2Q14151 953 aaKnown RBP eCLIP20.33■□□□□ 0.84
BRAT1-204ENST00000469750 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.84
BRAT1-204ENST00000469750 TRIM44Q96DX7 344 aaPredicted RBP20.33■□□□□ 0.84
BRAT1-204ENST00000469750 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
BRAT1-204ENST00000469750 OS9Q13438 667 aaPredicted RBP20.31■□□□□ 0.84
BRAT1-204ENST00000469750 ZRSR1Q15695 479 aaKnown RBP20.31■□□□□ 0.84
BRAT1-204ENST00000469750 SOX12O15370 315 aa20.29■□□□□ 0.84
BRAT1-204ENST00000469750 FOXD1Q16676 465 aa20.29■□□□□ 0.84
BRAT1-204ENST00000469750 ANKRD30AQ9BXX3 1397 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms