RNA–Protein interactions for RNA: ENST00000469559.5

ACAA1-214, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 2

Gene ACAA1, Length 4,720 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-214ENST00000469559 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
ACAA1-214ENST00000469559 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
ACAA1-214ENST00000469559 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
ACAA1-214ENST00000469559 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
ACAA1-214ENST00000469559 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
ACAA1-214ENST00000469559 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
ACAA1-214ENST00000469559 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
ACAA1-214ENST00000469559 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
ACAA1-214ENST00000469559 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
ACAA1-214ENST00000469559 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
ACAA1-214ENST00000469559 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
ACAA1-214ENST00000469559 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
ACAA1-214ENST00000469559 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
ACAA1-214ENST00000469559 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
ACAA1-214ENST00000469559 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
ACAA1-214ENST00000469559 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
ACAA1-214ENST00000469559 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
ACAA1-214ENST00000469559 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
ACAA1-214ENST00000469559 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
ACAA1-214ENST00000469559 RRP7BPQ9NSQ0 103 aa16.41■□□□□ 0.22
ACAA1-214ENST00000469559 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
ACAA1-214ENST00000469559 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
ACAA1-214ENST00000469559 KIF21BO75037 1637 aa16.38■□□□□ 0.21
ACAA1-214ENST00000469559 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
ACAA1-214ENST00000469559 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
ACAA1-214ENST00000469559 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
ACAA1-214ENST00000469559 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
ACAA1-214ENST00000469559 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
ACAA1-214ENST00000469559 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
ACAA1-214ENST00000469559 OSCARQ8IYS5 282 aa16.33■□□□□ 0.21
ACAA1-214ENST00000469559 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
ACAA1-214ENST00000469559 CHGAP10645 457 aaKnown RBP16.33■□□□□ 0.2
ACAA1-214ENST00000469559 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
ACAA1-214ENST00000469559 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
ACAA1-214ENST00000469559 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
ACAA1-214ENST00000469559 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
ACAA1-214ENST00000469559 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
ACAA1-214ENST00000469559 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
ACAA1-214ENST00000469559 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
ACAA1-214ENST00000469559 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
ACAA1-214ENST00000469559 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
ACAA1-214ENST00000469559 NEFMP07197 916 aa16.28■□□□□ 0.2
ACAA1-214ENST00000469559 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
ACAA1-214ENST00000469559 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
ACAA1-214ENST00000469559 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
ACAA1-214ENST00000469559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.195e-10■■□□□ 12.3
ACAA1-214ENST00000469559 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
ACAA1-214ENST00000469559 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
ACAA1-214ENST00000469559 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
ACAA1-214ENST00000469559 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
ACAA1-214ENST00000469559 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
ACAA1-214ENST00000469559 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
ACAA1-214ENST00000469559 CARD11Q9BXL7 1154 aa16.16■□□□□ 0.18
ACAA1-214ENST00000469559 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
ACAA1-214ENST00000469559 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
ACAA1-214ENST00000469559 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
ACAA1-214ENST00000469559 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.18
ACAA1-214ENST00000469559 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
ACAA1-214ENST00000469559 IGF1RP08069 1367 aa16.13■□□□□ 0.17
ACAA1-214ENST00000469559 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
ACAA1-214ENST00000469559 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
ACAA1-214ENST00000469559 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
ACAA1-214ENST00000469559 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
ACAA1-214ENST00000469559 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
ACAA1-214ENST00000469559 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
ACAA1-214ENST00000469559 IRX6P78412 446 aaPredicted RBP16.11■□□□□ 0.17
ACAA1-214ENST00000469559 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
ACAA1-214ENST00000469559 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
ACAA1-214ENST00000469559 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
ACAA1-214ENST00000469559 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
ACAA1-214ENST00000469559 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
ACAA1-214ENST00000469559 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
ACAA1-214ENST00000469559 CFTRP13569 1480 aa16.07■□□□□ 0.16
ACAA1-214ENST00000469559 CUX1P39880 1505 aa16.07■□□□□ 0.16
ACAA1-214ENST00000469559 ANKRD30AQ9BXX3 1397 aa16.05■□□□□ 0.16
ACAA1-214ENST00000469559 LRRC9Q6ZRR7 1453 aa16.05■□□□□ 0.16
ACAA1-214ENST00000469559 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
ACAA1-214ENST00000469559 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
ACAA1-214ENST00000469559 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
ACAA1-214ENST00000469559 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
ACAA1-214ENST00000469559 CASKIN1Q8WXD9 1431 aa16.01■□□□□ 0.15
ACAA1-214ENST00000469559 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
ACAA1-214ENST00000469559 ARAP1Q96P48 1450 aa16■□□□□ 0.15
ACAA1-214ENST00000469559 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 RALBP1Q15311 655 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 FYCO1Q9BQS8 1478 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 TMF1P82094 1093 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 RSPH4AQ5TD94 716 aa15.99■□□□□ 0.15
ACAA1-214ENST00000469559 MLECQ14165 292 aa15.98■□□□□ 0.15
ACAA1-214ENST00000469559 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
ACAA1-214ENST00000469559 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
ACAA1-214ENST00000469559 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
ACAA1-214ENST00000469559 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
ACAA1-214ENST00000469559 PKD2Q13563 968 aa15.97■□□□□ 0.15
ACAA1-214ENST00000469559 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
ACAA1-214ENST00000469559 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
ACAA1-214ENST00000469559 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
ACAA1-214ENST00000469559 L3MBTL2Q969R5 705 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms