RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 GSE1Q14687 1217 aa12.67□□□□□ -0.38
TMC1-203ENST00000469455 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
TMC1-203ENST00000469455 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
TMC1-203ENST00000469455 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
TMC1-203ENST00000469455 NUBP1P53384 320 aa12.63□□□□□ -0.39
TMC1-203ENST00000469455 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
TMC1-203ENST00000469455 SHROOM4Q9ULL8 1493 aa12.62□□□□□ -0.39
TMC1-203ENST00000469455 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
TMC1-203ENST00000469455 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
TMC1-203ENST00000469455 BCANQ96GW7 911 aa12.6□□□□□ -0.39
TMC1-203ENST00000469455 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
TMC1-203ENST00000469455 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
TMC1-203ENST00000469455 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
TMC1-203ENST00000469455 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
TMC1-203ENST00000469455 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
TMC1-203ENST00000469455 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
TMC1-203ENST00000469455 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
TMC1-203ENST00000469455 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
TMC1-203ENST00000469455 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
TMC1-203ENST00000469455 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
TMC1-203ENST00000469455 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
TMC1-203ENST00000469455 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
TMC1-203ENST00000469455 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
TMC1-203ENST00000469455 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
TMC1-203ENST00000469455 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
TMC1-203ENST00000469455 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
TMC1-203ENST00000469455 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
TMC1-203ENST00000469455 STK25O00506 426 aa12.35□□□□□ -0.43
TMC1-203ENST00000469455 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
TMC1-203ENST00000469455 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
TMC1-203ENST00000469455 PYGBP11216 843 aa12.31□□□□□ -0.44
TMC1-203ENST00000469455 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
TMC1-203ENST00000469455 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
TMC1-203ENST00000469455 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
TMC1-203ENST00000469455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
TMC1-203ENST00000469455 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
TMC1-203ENST00000469455 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
TMC1-203ENST00000469455 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
TMC1-203ENST00000469455 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
TMC1-203ENST00000469455 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
TMC1-203ENST00000469455 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
TMC1-203ENST00000469455 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
TMC1-203ENST00000469455 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
TMC1-203ENST00000469455 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
TMC1-203ENST00000469455 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
TMC1-203ENST00000469455 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
TMC1-203ENST00000469455 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
TMC1-203ENST00000469455 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
TMC1-203ENST00000469455 PEG3Q9GZU2 1588 aa12.17□□□□□ -0.46
TMC1-203ENST00000469455 NBR1Q14596 966 aa12.16□□□□□ -0.46
TMC1-203ENST00000469455 WIZO95785 1651 aa12.13□□□□□ -0.47
TMC1-203ENST00000469455 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
TMC1-203ENST00000469455 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
TMC1-203ENST00000469455 SMARCA2P51531 1590 aa12.1□□□□□ -0.47
TMC1-203ENST00000469455 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
TMC1-203ENST00000469455 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMC1-203ENST00000469455 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
TMC1-203ENST00000469455 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
TMC1-203ENST00000469455 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
TMC1-203ENST00000469455 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
TMC1-203ENST00000469455 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
TMC1-203ENST00000469455 HMGXB3Q12766 1538 aa12.05□□□□□ -0.48
TMC1-203ENST00000469455 NCAPD3P42695 1498 aa12.02□□□□□ -0.48
TMC1-203ENST00000469455 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
TMC1-203ENST00000469455 PSEN1P49768 467 aa12.02□□□□□ -0.49
TMC1-203ENST00000469455 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
TMC1-203ENST00000469455 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
TMC1-203ENST00000469455 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
TMC1-203ENST00000469455 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
TMC1-203ENST00000469455 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
TMC1-203ENST00000469455 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
TMC1-203ENST00000469455 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
TMC1-203ENST00000469455 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
TMC1-203ENST00000469455 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
TMC1-203ENST00000469455 MAP3K13O43283 966 aa11.92□□□□□ -0.5
TMC1-203ENST00000469455 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
TMC1-203ENST00000469455 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
TMC1-203ENST00000469455 SOX12O15370 315 aa11.88□□□□□ -0.51
TMC1-203ENST00000469455 NLRP6P59044 892 aa11.87□□□□□ -0.51
TMC1-203ENST00000469455 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
TMC1-203ENST00000469455 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
TMC1-203ENST00000469455 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
TMC1-203ENST00000469455 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
TMC1-203ENST00000469455 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
TMC1-203ENST00000469455 PPP1R37O75864 691 aa11.82□□□□□ -0.52
TMC1-203ENST00000469455 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
TMC1-203ENST00000469455 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
TMC1-203ENST00000469455 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
TMC1-203ENST00000469455 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
TMC1-203ENST00000469455 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
TMC1-203ENST00000469455 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
TMC1-203ENST00000469455 E2F4Q16254 413 aa11.71□□□□□ -0.53
TMC1-203ENST00000469455 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
TMC1-203ENST00000469455 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
TMC1-203ENST00000469455 CFTRP13569 1480 aa11.7□□□□□ -0.54
TMC1-203ENST00000469455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMC1-203ENST00000469455 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
TMC1-203ENST00000469455 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
TMC1-203ENST00000469455 PDE4AP27815 886 aa11.67□□□□□ -0.54
TMC1-203ENST00000469455 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms