RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
SMG5-202ENST00000468993 RNF25Q96BH1 459 aaPredicted RBP8.98□□□□□ -0.97
SMG5-202ENST00000468993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMG5-202ENST00000468993 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
SMG5-202ENST00000468993 RYDENQ9NUL5 291 aaKnown RBP8.94□□□□□ -0.98
SMG5-202ENST00000468993 GSE1Q14687 1217 aa8.93□□□□□ -0.98
SMG5-202ENST00000468993 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
SMG5-202ENST00000468993 SPINK5Q9NQ38 1064 aaPredicted RBP8.92□□□□□ -0.98
SMG5-202ENST00000468993 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
SMG5-202ENST00000468993 NEUROD2Q15784 382 aa8.89□□□□□ -0.99
SMG5-202ENST00000468993 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
SMG5-202ENST00000468993 STK25O00506 426 aa8.88□□□□□ -0.99
SMG5-202ENST00000468993 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
SMG5-202ENST00000468993 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
SMG5-202ENST00000468993 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
SMG5-202ENST00000468993 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
SMG5-202ENST00000468993 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMG5-202ENST00000468993 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
SMG5-202ENST00000468993 CAPN15O75808 1086 aa8.85□□□□□ -0.99
SMG5-202ENST00000468993 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
SMG5-202ENST00000468993 WDR70Q9NW82 654 aa8.82□□□□□ -1
SMG5-202ENST00000468993 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
SMG5-202ENST00000468993 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
SMG5-202ENST00000468993 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
SMG5-202ENST00000468993 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
SMG5-202ENST00000468993 NUBP1P53384 320 aa8.76□□□□□ -1.01
SMG5-202ENST00000468993 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
SMG5-202ENST00000468993 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
SMG5-202ENST00000468993 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
SMG5-202ENST00000468993 STK24Q9Y6E0 443 aa8.76□□□□□ -1.01
SMG5-202ENST00000468993 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
SMG5-202ENST00000468993 ABCB7O75027 752 aa8.74□□□□□ -1.01
SMG5-202ENST00000468993 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
SMG5-202ENST00000468993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.72□□□□□ -1.01
SMG5-202ENST00000468993 CHRM1P11229 460 aaPredicted RBP8.72□□□□□ -1.01
SMG5-202ENST00000468993 HRCP23327 699 aa8.72□□□□□ -1.01
SMG5-202ENST00000468993 ZFP91Q96JP5 570 aaPredicted RBP8.72□□□□□ -1.01
SMG5-202ENST00000468993 ARHGEF1Q92888 912 aaKnown RBP8.71□□□□□ -1.02
SMG5-202ENST00000468993 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
SMG5-202ENST00000468993 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
SMG5-202ENST00000468993 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
SMG5-202ENST00000468993 ZMYND10O75800 440 aa8.67□□□□□ -1.02
SMG5-202ENST00000468993 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
SMG5-202ENST00000468993 SEMA3EO15041 775 aa8.61□□□□□ -1.03
SMG5-202ENST00000468993 E2F4Q16254 413 aa8.6□□□□□ -1.03
SMG5-202ENST00000468993 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
SMG5-202ENST00000468993 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
SMG5-202ENST00000468993 ARID3AQ99856 593 aa8.59□□□□□ -1.03
SMG5-202ENST00000468993 CCDC9Q9Y3X0 531 aaKnown RBP8.58□□□□□ -1.04
SMG5-202ENST00000468993 C1QBPQ07021 282 aaKnown RBP8.57□□□□□ -1.04
SMG5-202ENST00000468993 AK7Q96M32 723 aa8.57□□□□□ -1.04
SMG5-202ENST00000468993 ZBTB7CA1YPR0 619 aa8.56□□□□□ -1.04
SMG5-202ENST00000468993 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
SMG5-202ENST00000468993 GPBP1L1Q9HC44 474 aaPredicted RBP8.55□□□□□ -1.04
SMG5-202ENST00000468993 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
SMG5-202ENST00000468993 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
SMG5-202ENST00000468993 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
SMG5-202ENST00000468993 ABCC9O60706 1549 aa8.52□□□□□ -1.05
SMG5-202ENST00000468993 PYGBP11216 843 aa8.51□□□□□ -1.05
SMG5-202ENST00000468993 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
SMG5-202ENST00000468993 DSG3P32926 999 aa8.5□□□□□ -1.05
SMG5-202ENST00000468993 APBB1O00213 710 aa8.48□□□□□ -1.05
SMG5-202ENST00000468993 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
SMG5-202ENST00000468993 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
SMG5-202ENST00000468993 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
SMG5-202ENST00000468993 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
SMG5-202ENST00000468993 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
SMG5-202ENST00000468993 FLIIQ13045 1269 aa8.45□□□□□ -1.06
SMG5-202ENST00000468993 ZNF467Q7Z7K2 595 aaPredicted RBP8.45□□□□□ -1.06
SMG5-202ENST00000468993 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
SMG5-202ENST00000468993 CREBZFQ9NS37 354 aa8.45□□□□□ -1.06
SMG5-202ENST00000468993 PDE4DQ08499 809 aa8.44□□□□□ -1.06
SMG5-202ENST00000468993 GPIHBP1Q8IV16 184 aa8.44□□□□□ -1.06
SMG5-202ENST00000468993 TRIM66O15016 1216 aa8.43□□□□□ -1.06
SMG5-202ENST00000468993 PDAP1Q13442 181 aaKnown RBP8.43□□□□□ -1.06
SMG5-202ENST00000468993 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
SMG5-202ENST00000468993 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
SMG5-202ENST00000468993 PPP1R37O75864 691 aa8.38□□□□□ -1.07
SMG5-202ENST00000468993 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
SMG5-202ENST00000468993 MFSD10Q14728 455 aa8.37□□□□□ -1.07
SMG5-202ENST00000468993 RBM26Q5T8P6 1007 aaKnown RBP8.37□□□□□ -1.07
SMG5-202ENST00000468993 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
SMG5-202ENST00000468993 A6NJR5 290 aa8.36□□□□□ -1.07
SMG5-202ENST00000468993 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
SMG5-202ENST00000468993 FAM117AQ9C073 453 aa8.36□□□□□ -1.07
SMG5-202ENST00000468993 NCKAP5LQ9HCH0 1330 aa8.35□□□□□ -1.07
SMG5-202ENST00000468993 PDE4AP27815 886 aa8.35□□□□□ -1.07
SMG5-202ENST00000468993 NLRP6P59044 892 aa8.34□□□□□ -1.07
SMG5-202ENST00000468993 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
SMG5-202ENST00000468993 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
SMG5-202ENST00000468993 TRAK2O60296 914 aa8.33□□□□□ -1.08
SMG5-202ENST00000468993 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
SMG5-202ENST00000468993 PRR29P0C7W0 189 aa8.33□□□□□ -1.08
SMG5-202ENST00000468993 CAMK2BQ13554 666 aa8.33□□□□□ -1.08
SMG5-202ENST00000468993 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
SMG5-202ENST00000468993 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
SMG5-202ENST00000468993 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
SMG5-202ENST00000468993 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
SMG5-202ENST00000468993 PSEN1P49768 467 aa8.31□□□□□ -1.08
SMG5-202ENST00000468993 DDX27Q96GQ7 796 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms