RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 POTEIP0CG38 1075 aa19.66■□□□□ 0.74
CKAP2-205ENST00000468284 PHF12Q96QT6 1004 aa19.65■□□□□ 0.74
CKAP2-205ENST00000468284 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
CKAP2-205ENST00000468284 DCBLD2Q96PD2 775 aa19.62■□□□□ 0.73
CKAP2-205ENST00000468284 GALR2O43603 387 aaPredicted RBP19.6■□□□□ 0.73
CKAP2-205ENST00000468284 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
CKAP2-205ENST00000468284 PLCD3Q8N3E9 789 aa19.56■□□□□ 0.72
CKAP2-205ENST00000468284 TSPYL2Q9H2G4 693 aaPredicted RBP19.54■□□□□ 0.72
CKAP2-205ENST00000468284 LHX8Q68G74 356 aa19.49■□□□□ 0.71
CKAP2-205ENST00000468284 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
CKAP2-205ENST00000468284 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
CKAP2-205ENST00000468284 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
CKAP2-205ENST00000468284 RASEFQ8IZ41 740 aa19.39■□□□□ 0.69
CKAP2-205ENST00000468284 MS4A3Q96HJ5 214 aa19.39■□□□□ 0.69
CKAP2-205ENST00000468284 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
CKAP2-205ENST00000468284 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
CKAP2-205ENST00000468284 KIF12Q96FN5 646 aa19.28■□□□□ 0.68
CKAP2-205ENST00000468284 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.67
CKAP2-205ENST00000468284 NUBP1P53384 320 aa19.25■□□□□ 0.67
CKAP2-205ENST00000468284 ASTLQ6HA08 431 aaPredicted RBP19.21■□□□□ 0.67
CKAP2-205ENST00000468284 MAP3K13O43283 966 aa19.19■□□□□ 0.66
CKAP2-205ENST00000468284 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
CKAP2-205ENST00000468284 ATMINO43313 823 aaPredicted RBP19.17■□□□□ 0.66
CKAP2-205ENST00000468284 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
CKAP2-205ENST00000468284 FAM212AQ96EL1 285 aa19.15■□□□□ 0.66
CKAP2-205ENST00000468284 VASPP50552 380 aaPredicted RBP19.11■□□□□ 0.65
CKAP2-205ENST00000468284 TRPC6Q9Y210 931 aa19.08■□□□□ 0.64
CKAP2-205ENST00000468284 SLC39A7Q92504 469 aa19.06■□□□□ 0.64
CKAP2-205ENST00000468284 METRNQ9UJH8 293 aa19.06■□□□□ 0.64
CKAP2-205ENST00000468284 ATN1P54259 1190 aaPredicted RBP19.05■□□□□ 0.64
CKAP2-205ENST00000468284 BMP2KQ9NSY1 1161 aaPredicted RBP19.04■□□□□ 0.64
CKAP2-205ENST00000468284 SGIP1Q9BQI5 828 aa19.03■□□□□ 0.64
CKAP2-205ENST00000468284 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
CKAP2-205ENST00000468284 C7P10643 843 aa19.02■□□□□ 0.64
CKAP2-205ENST00000468284 TIE1P35590 1138 aa19.02■□□□□ 0.64
CKAP2-205ENST00000468284 POTEB2H3BUK9 544 aa19.01■□□□□ 0.63
CKAP2-205ENST00000468284 KLHL34Q8N239 644 aa19■□□□□ 0.63
CKAP2-205ENST00000468284 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
CKAP2-205ENST00000468284 DCAF8Q5TAQ9 597 aa18.99■□□□□ 0.63
CKAP2-205ENST00000468284 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
CKAP2-205ENST00000468284 TTLL13PA6NNM8 815 aa18.92■□□□□ 0.62
CKAP2-205ENST00000468284 IFNL1Q8IU54 200 aa18.92■□□□□ 0.62
CKAP2-205ENST00000468284 OTUD5Q96G74 571 aa18.91■□□□□ 0.62
CKAP2-205ENST00000468284 CUX2O14529 1486 aa18.9■□□□□ 0.62
CKAP2-205ENST00000468284 PYGBP11216 843 aa18.87■□□□□ 0.61
CKAP2-205ENST00000468284 GSE1Q14687 1217 aa18.81■□□□□ 0.6
CKAP2-205ENST00000468284 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
CKAP2-205ENST00000468284 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
CKAP2-205ENST00000468284 POTEJP0CG39 1038 aa18.77■□□□□ 0.6
CKAP2-205ENST00000468284 TMEM106CQ9BVX2 250 aa18.77■□□□□ 0.6
CKAP2-205ENST00000468284 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
CKAP2-205ENST00000468284 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
CKAP2-205ENST00000468284 SEC24BO95487 1268 aa18.73■□□□□ 0.59
CKAP2-205ENST00000468284 MAMSTRQ6ZN01 415 aa18.73■□□□□ 0.59
CKAP2-205ENST00000468284 IER5LQ5T953 404 aa18.72■□□□□ 0.59
CKAP2-205ENST00000468284 PCDHB8Q9UN66 801 aa18.71■□□□□ 0.59
CKAP2-205ENST00000468284 SPOCK2Q92563 424 aa18.7■□□□□ 0.58
CKAP2-205ENST00000468284 COLQQ9Y215 455 aaPredicted RBP18.7■□□□□ 0.58
CKAP2-205ENST00000468284 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
CKAP2-205ENST00000468284 SCUBE2Q9NQ36 999 aa18.65■□□□□ 0.58
CKAP2-205ENST00000468284 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
CKAP2-205ENST00000468284 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
CKAP2-205ENST00000468284 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
CKAP2-205ENST00000468284 PLCG2P16885 1265 aa18.54■□□□□ 0.56
CKAP2-205ENST00000468284 NESP48681 1621 aa18.53■□□□□ 0.56
CKAP2-205ENST00000468284 IRX5P78411 483 aaPredicted RBP18.51■□□□□ 0.55
CKAP2-205ENST00000468284 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
CKAP2-205ENST00000468284 PSEN1P49768 467 aa18.43■□□□□ 0.54
CKAP2-205ENST00000468284 OCEL1Q9H607 264 aa18.43■□□□□ 0.54
CKAP2-205ENST00000468284 GOLGA2Q08379 1002 aa18.41■□□□□ 0.54
CKAP2-205ENST00000468284 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
CKAP2-205ENST00000468284 PDAP1Q13442 181 aaKnown RBP18.38■□□□□ 0.53
CKAP2-205ENST00000468284 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
CKAP2-205ENST00000468284 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
CKAP2-205ENST00000468284 POTEMA6NI47 508 aa18.34■□□□□ 0.53
CKAP2-205ENST00000468284 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
CKAP2-205ENST00000468284 FAM163AQ96GL9 167 aaPredicted RBP18.3■□□□□ 0.52
CKAP2-205ENST00000468284 SLAIN1Q8ND83 568 aa18.29■□□□□ 0.52
CKAP2-205ENST00000468284 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
CKAP2-205ENST00000468284 PDCD7Q8N8D1 485 aaKnown RBP18.27■□□□□ 0.52
CKAP2-205ENST00000468284 LCE2DQ5TA82 110 aaPredicted RBP18.25■□□□□ 0.51
CKAP2-205ENST00000468284 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
CKAP2-205ENST00000468284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.516e-7■■■■□ 25.5
CKAP2-205ENST00000468284 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
CKAP2-205ENST00000468284 KIF21AQ7Z4S6 1674 aa18.21■□□□□ 0.51
CKAP2-205ENST00000468284 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.18■□□□□ 0.5
CKAP2-205ENST00000468284 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
CKAP2-205ENST00000468284 L3MBTL3Q96JM7 780 aaPredicted RBP18.15■□□□□ 0.5
CKAP2-205ENST00000468284 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
CKAP2-205ENST00000468284 ILDR1Q86SU0 546 aaPredicted RBP18.12■□□□□ 0.49
CKAP2-205ENST00000468284 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
CKAP2-205ENST00000468284 C3orf67Q6ZVT6 689 aa18.1■□□□□ 0.49
CKAP2-205ENST00000468284 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.48
CKAP2-205ENST00000468284 PLSCR2Q9NRY7 297 aa18.08■□□□□ 0.48
CKAP2-205ENST00000468284 RNF25Q96BH1 459 aaPredicted RBP18.07■□□□□ 0.48
CKAP2-205ENST00000468284 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
CKAP2-205ENST00000468284 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
CKAP2-205ENST00000468284 DPY19L2Q6NUT2 758 aa18.04■□□□□ 0.48
CKAP2-205ENST00000468284 EFCAB3Q8N7B9 438 aa18.02■□□□□ 0.48
CKAP2-205ENST00000468284 PCDH10Q9P2E7 1040 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms