RNA–Protein interactions for RNA: ENST00000467061.1

TMEM41A-204, Transcript of transmembrane protein 41A, humanhuman

TSL 2

Gene TMEM41A, Length 4,921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-204ENST00000467061 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
TMEM41A-204ENST00000467061 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
TMEM41A-204ENST00000467061 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
TMEM41A-204ENST00000467061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.01■□□□□ 0.95
TMEM41A-204ENST00000467061 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
TMEM41A-204ENST00000467061 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
TMEM41A-204ENST00000467061 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
TMEM41A-204ENST00000467061 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
TMEM41A-204ENST00000467061 SOGA1O94964 1423 aa20.98■□□□□ 0.95
TMEM41A-204ENST00000467061 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
TMEM41A-204ENST00000467061 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
TMEM41A-204ENST00000467061 HIRIP3Q9BW71 556 aaPredicted RBP20.95■□□□□ 0.94
TMEM41A-204ENST00000467061 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
TMEM41A-204ENST00000467061 SLC24A1O60721 1099 aa20.92■□□□□ 0.94
TMEM41A-204ENST00000467061 SALL2Q9Y467 1007 aaPredicted RBP20.92■□□□□ 0.94
TMEM41A-204ENST00000467061 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
TMEM41A-204ENST00000467061 CARMIL1Q5VZK9 1371 aa20.9■□□□□ 0.94
TMEM41A-204ENST00000467061 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.93
TMEM41A-204ENST00000467061 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
TMEM41A-204ENST00000467061 HSP90AA1P07900 732 aaKnown RBP20.87■□□□□ 0.93
TMEM41A-204ENST00000467061 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
TMEM41A-204ENST00000467061 CUX2O14529 1486 aa20.85■□□□□ 0.93
TMEM41A-204ENST00000467061 BCL11AQ9H165 835 aa20.83■□□□□ 0.93
TMEM41A-204ENST00000467061 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
TMEM41A-204ENST00000467061 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
TMEM41A-204ENST00000467061 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
TMEM41A-204ENST00000467061 IRX6P78412 446 aaPredicted RBP20.78■□□□□ 0.92
TMEM41A-204ENST00000467061 CCER2I3L3R5 266 aa20.78■□□□□ 0.92
TMEM41A-204ENST00000467061 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
TMEM41A-204ENST00000467061 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
TMEM41A-204ENST00000467061 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
TMEM41A-204ENST00000467061 ARHGAP35Q9NRY4 1499 aa20.73■□□□□ 0.91
TMEM41A-204ENST00000467061 PPP4R2Q9NY27 417 aa20.73■□□□□ 0.91
TMEM41A-204ENST00000467061 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
TMEM41A-204ENST00000467061 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
TMEM41A-204ENST00000467061 RGL3Q3MIN7 710 aa20.68■□□□□ 0.9
TMEM41A-204ENST00000467061 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
TMEM41A-204ENST00000467061 NBR1Q14596 966 aa20.68■□□□□ 0.9
TMEM41A-204ENST00000467061 KCNH8Q96L42 1107 aa20.67■□□□□ 0.9
TMEM41A-204ENST00000467061 MYH16Q9H6N6 1097 aa20.67■□□□□ 0.9
TMEM41A-204ENST00000467061 BECN1Q14457 450 aa20.66■□□□□ 0.9
TMEM41A-204ENST00000467061 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
TMEM41A-204ENST00000467061 WIZO95785 1651 aa20.65■□□□□ 0.9
TMEM41A-204ENST00000467061 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.89
TMEM41A-204ENST00000467061 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
TMEM41A-204ENST00000467061 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
TMEM41A-204ENST00000467061 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.89
TMEM41A-204ENST00000467061 RAB3GAP2Q9H2M9 1393 aa20.58■□□□□ 0.89
TMEM41A-204ENST00000467061 EIF4G1Q04637 1599 aaKnown RBP20.56■□□□□ 0.88
TMEM41A-204ENST00000467061 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
TMEM41A-204ENST00000467061 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
TMEM41A-204ENST00000467061 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
TMEM41A-204ENST00000467061 TMF1P82094 1093 aa20.52■□□□□ 0.88
TMEM41A-204ENST00000467061 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
TMEM41A-204ENST00000467061 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
TMEM41A-204ENST00000467061 NUDCQ9Y266 331 aa20.49■□□□□ 0.87
TMEM41A-204ENST00000467061 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
TMEM41A-204ENST00000467061 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
TMEM41A-204ENST00000467061 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
TMEM41A-204ENST00000467061 MS4A1P11836 297 aa20.47■□□□□ 0.87
TMEM41A-204ENST00000467061 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
TMEM41A-204ENST00000467061 DCAF11Q8TEB1 546 aa20.46■□□□□ 0.87
TMEM41A-204ENST00000467061 CHMP4BQ9H444 224 aaKnown RBP20.46■□□□□ 0.87
TMEM41A-204ENST00000467061 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
TMEM41A-204ENST00000467061 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
TMEM41A-204ENST00000467061 KANK1Q14678 1352 aa20.45■□□□□ 0.86
TMEM41A-204ENST00000467061 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
TMEM41A-204ENST00000467061 FTSJ3Q8IY81 847 aaKnown RBP20.43■□□□□ 0.86
TMEM41A-204ENST00000467061 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
TMEM41A-204ENST00000467061 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
TMEM41A-204ENST00000467061 NOP58Q9Y2X3 529 aaKnown RBP20.4■□□□□ 0.86
TMEM41A-204ENST00000467061 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
TMEM41A-204ENST00000467061 PKD2Q13563 968 aa20.39■□□□□ 0.86
TMEM41A-204ENST00000467061 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.85
TMEM41A-204ENST00000467061 RALBP1Q15311 655 aa20.36■□□□□ 0.85
TMEM41A-204ENST00000467061 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
TMEM41A-204ENST00000467061 KTN1Q86UP2 1357 aaKnown RBP20.36■□□□□ 0.85
TMEM41A-204ENST00000467061 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
TMEM41A-204ENST00000467061 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
TMEM41A-204ENST00000467061 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
TMEM41A-204ENST00000467061 CASC1Q6TDU7 716 aa20.34■□□□□ 0.85
TMEM41A-204ENST00000467061 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.85
TMEM41A-204ENST00000467061 POGKQ9P215 609 aa20.32■□□□□ 0.84
TMEM41A-204ENST00000467061 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
TMEM41A-204ENST00000467061 RSPH4AQ5TD94 716 aa20.31■□□□□ 0.84
TMEM41A-204ENST00000467061 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
TMEM41A-204ENST00000467061 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
TMEM41A-204ENST00000467061 TRIM44Q96DX7 344 aaPredicted RBP20.3■□□□□ 0.84
TMEM41A-204ENST00000467061 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
TMEM41A-204ENST00000467061 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
TMEM41A-204ENST00000467061 NUP155O75694 1391 aa20.29■□□□□ 0.84
TMEM41A-204ENST00000467061 ARXQ96QS3 562 aa20.28■□□□□ 0.84
TMEM41A-204ENST00000467061 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
TMEM41A-204ENST00000467061 SENP3-EIF4A1A0A087X0R7 540 aa20.27■□□□□ 0.84
TMEM41A-204ENST00000467061 RGS3P49796 1198 aa20.27■□□□□ 0.84
TMEM41A-204ENST00000467061 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
TMEM41A-204ENST00000467061 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
TMEM41A-204ENST00000467061 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
TMEM41A-204ENST00000467061 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
TMEM41A-204ENST00000467061 EFCAB2Q5VUJ9 269 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 286.5 ms