RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
CMC1-205ENST00000466830 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
CMC1-205ENST00000466830 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
CMC1-205ENST00000466830 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
CMC1-205ENST00000466830 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
CMC1-205ENST00000466830 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
CMC1-205ENST00000466830 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
CMC1-205ENST00000466830 CUX2O14529 1486 aa15.22■□□□□ 0.03
CMC1-205ENST00000466830 TOP2AP11388 1531 aaKnown RBP15.2■□□□□ 0.02
CMC1-205ENST00000466830 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
CMC1-205ENST00000466830 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
CMC1-205ENST00000466830 WIZO95785 1651 aa15.19■□□□□ 0.02
CMC1-205ENST00000466830 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
CMC1-205ENST00000466830 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
CMC1-205ENST00000466830 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
CMC1-205ENST00000466830 CCDC136Q96JN2 1154 aa15.16■□□□□ 0.02
CMC1-205ENST00000466830 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
CMC1-205ENST00000466830 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
CMC1-205ENST00000466830 WDR43Q15061 677 aaKnown RBP eCLIP15.12■□□□□ 0.01
CMC1-205ENST00000466830 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
CMC1-205ENST00000466830 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
CMC1-205ENST00000466830 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
CMC1-205ENST00000466830 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
CMC1-205ENST00000466830 SLC24A1O60721 1099 aa15.09■□□□□ 0.01
CMC1-205ENST00000466830 IRX6P78412 446 aaPredicted RBP15.09■□□□□ 0.01
CMC1-205ENST00000466830 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0.01
CMC1-205ENST00000466830 RGL3Q3MIN7 710 aa15.06■□□□□ 0
CMC1-205ENST00000466830 SETD5Q9C0A6 1442 aa15.06■□□□□ 0
CMC1-205ENST00000466830 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
CMC1-205ENST00000466830 ARHGAP35Q9NRY4 1499 aa15.02□□□□□ -0.01
CMC1-205ENST00000466830 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
CMC1-205ENST00000466830 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
CMC1-205ENST00000466830 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
CMC1-205ENST00000466830 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
CMC1-205ENST00000466830 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
CMC1-205ENST00000466830 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
CMC1-205ENST00000466830 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
CMC1-205ENST00000466830 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
CMC1-205ENST00000466830 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
CMC1-205ENST00000466830 FMN1Q68DA7 1419 aa14.97□□□□□ -0.01
CMC1-205ENST00000466830 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
CMC1-205ENST00000466830 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
CMC1-205ENST00000466830 TDRD9Q8NDG6 1382 aaKnown RBP14.95□□□□□ -0.02
CMC1-205ENST00000466830 RUSC2Q8N2Y8 1516 aa14.93□□□□□ -0.02
CMC1-205ENST00000466830 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
CMC1-205ENST00000466830 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
CMC1-205ENST00000466830 HSP90AA1P07900 732 aaKnown RBP14.9□□□□□ -0.02
CMC1-205ENST00000466830 SENP3-EIF4A1A0A087X0R7 540 aa14.89□□□□□ -0.03
CMC1-205ENST00000466830 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
CMC1-205ENST00000466830 HSPA5P11021 654 aaKnown RBP14.87□□□□□ -0.03
CMC1-205ENST00000466830 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
CMC1-205ENST00000466830 NBR1Q14596 966 aa14.87□□□□□ -0.03
CMC1-205ENST00000466830 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
CMC1-205ENST00000466830 PPP1R15AO75807 674 aaPredicted RBP14.85□□□□□ -0.03
CMC1-205ENST00000466830 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
CMC1-205ENST00000466830 CFAP53Q96M91 514 aa14.84□□□□□ -0.03
CMC1-205ENST00000466830 MPHOSPH9Q99550 1183 aa14.84□□□□□ -0.03
CMC1-205ENST00000466830 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.03
CMC1-205ENST00000466830 PKD2Q13563 968 aa14.83□□□□□ -0.04
CMC1-205ENST00000466830 FOXD1Q16676 465 aa14.82□□□□□ -0.04
CMC1-205ENST00000466830 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
CMC1-205ENST00000466830 DHX57Q6P158 1386 aaKnown RBP14.8□□□□□ -0.04
CMC1-205ENST00000466830 TMF1P82094 1093 aa14.8□□□□□ -0.04
CMC1-205ENST00000466830 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
CMC1-205ENST00000466830 ANP32BQ92688 251 aaKnown RBP14.78□□□□□ -0.04
CMC1-205ENST00000466830 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
CMC1-205ENST00000466830 MYH16Q9H6N6 1097 aa14.76□□□□□ -0.05
CMC1-205ENST00000466830 ANKRD30AQ9BXX3 1397 aa14.75□□□□□ -0.05
CMC1-205ENST00000466830 NUP155O75694 1391 aa14.74□□□□□ -0.05
CMC1-205ENST00000466830 KANK1Q14678 1352 aa14.74□□□□□ -0.05
CMC1-205ENST00000466830 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
CMC1-205ENST00000466830 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
CMC1-205ENST00000466830 B4GALNT3Q6L9W6 998 aa14.73□□□□□ -0.05
CMC1-205ENST00000466830 L3MBTL2Q969R5 705 aa14.73□□□□□ -0.05
CMC1-205ENST00000466830 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
CMC1-205ENST00000466830 IGF1RP08069 1367 aa14.71□□□□□ -0.05
CMC1-205ENST00000466830 NUDCQ9Y266 331 aa14.71□□□□□ -0.06
CMC1-205ENST00000466830 CCDC18Q5T9S5 1454 aa14.71□□□□□ -0.06
CMC1-205ENST00000466830 BECN1Q14457 450 aa14.71□□□□□ -0.06
CMC1-205ENST00000466830 POGKQ9P215 609 aa14.69□□□□□ -0.06
CMC1-205ENST00000466830 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
CMC1-205ENST00000466830 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
CMC1-205ENST00000466830 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
CMC1-205ENST00000466830 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
CMC1-205ENST00000466830 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
CMC1-205ENST00000466830 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
CMC1-205ENST00000466830 KTN1Q86UP2 1357 aaKnown RBP14.67□□□□□ -0.06
CMC1-205ENST00000466830 ROCK2O75116 1388 aaKnown RBP14.66□□□□□ -0.06
CMC1-205ENST00000466830 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
CMC1-205ENST00000466830 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
CMC1-205ENST00000466830 RALBP1Q15311 655 aa14.65□□□□□ -0.06
CMC1-205ENST00000466830 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
CMC1-205ENST00000466830 JPH4Q96JJ6 628 aa14.64□□□□□ -0.07
CMC1-205ENST00000466830 ARID4BQ4LE39 1312 aaPredicted RBP14.64□□□□□ -0.07
CMC1-205ENST00000466830 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
CMC1-205ENST00000466830 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CMC1-205ENST00000466830 RGS3P49796 1198 aa14.62□□□□□ -0.07
CMC1-205ENST00000466830 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.071e-6■■■■■ 33.5
CMC1-205ENST00000466830 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
CMC1-205ENST00000466830 ARXQ96QS3 562 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms