RNA–Protein interactions for RNA: ENST00000465344.1

NUP188-203, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 400 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-203ENST00000465344 MIER1Q8N108 512 aa11.09□□□□□ -0.63
NUP188-203ENST00000465344 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
NUP188-203ENST00000465344 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
NUP188-203ENST00000465344 GABBR2O75899 941 aa11.03□□□□□ -0.64
NUP188-203ENST00000465344 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
NUP188-203ENST00000465344 CLCN6P51797 869 aa11.02□□□□□ -0.65
NUP188-203ENST00000465344 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
NUP188-203ENST00000465344 ZRANB1Q9UGI0 708 aa11.02□□□□□ -0.65
NUP188-203ENST00000465344 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
NUP188-203ENST00000465344 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
NUP188-203ENST00000465344 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
NUP188-203ENST00000465344 NUBP1P53384 320 aa10.9□□□□□ -0.66
NUP188-203ENST00000465344 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
NUP188-203ENST00000465344 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
NUP188-203ENST00000465344 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
NUP188-203ENST00000465344 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
NUP188-203ENST00000465344 NCAPD3P42695 1498 aa10.86□□□□□ -0.67
NUP188-203ENST00000465344 GALR2O43603 387 aaPredicted RBP10.83□□□□□ -0.68
NUP188-203ENST00000465344 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
NUP188-203ENST00000465344 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
NUP188-203ENST00000465344 KIF12Q96FN5 646 aa10.79□□□□□ -0.68
NUP188-203ENST00000465344 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
NUP188-203ENST00000465344 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
NUP188-203ENST00000465344 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
NUP188-203ENST00000465344 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
NUP188-203ENST00000465344 MS4A3Q96HJ5 214 aa10.76□□□□□ -0.69
NUP188-203ENST00000465344 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
NUP188-203ENST00000465344 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
NUP188-203ENST00000465344 BAZ1AQ9NRL2 1556 aaPredicted RBP10.74□□□□□ -0.69
NUP188-203ENST00000465344 SMARCA4P51532 1647 aa10.74□□□□□ -0.69
NUP188-203ENST00000465344 BAZ1BQ9UIG0 1483 aaKnown RBP10.73□□□□□ -0.69
NUP188-203ENST00000465344 MAP3K13O43283 966 aa10.72□□□□□ -0.69
NUP188-203ENST00000465344 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
NUP188-203ENST00000465344 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
NUP188-203ENST00000465344 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
NUP188-203ENST00000465344 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
NUP188-203ENST00000465344 SPOCK2Q92563 424 aa10.69□□□□□ -0.7
NUP188-203ENST00000465344 GSE1Q14687 1217 aa10.68□□□□□ -0.7
NUP188-203ENST00000465344 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
NUP188-203ENST00000465344 CUX2O14529 1486 aa10.67□□□□□ -0.7
NUP188-203ENST00000465344 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.7
NUP188-203ENST00000465344 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
NUP188-203ENST00000465344 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
NUP188-203ENST00000465344 NESP48681 1621 aa10.63□□□□□ -0.71
NUP188-203ENST00000465344 PEG3Q9GZU2 1588 aa10.62□□□□□ -0.71
NUP188-203ENST00000465344 TIE1P35590 1138 aa10.62□□□□□ -0.71
NUP188-203ENST00000465344 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
NUP188-203ENST00000465344 PYGBP11216 843 aa10.61□□□□□ -0.71
NUP188-203ENST00000465344 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
NUP188-203ENST00000465344 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
NUP188-203ENST00000465344 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
NUP188-203ENST00000465344 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
NUP188-203ENST00000465344 PDS5BQ9NTI5 1447 aa10.59□□□□□ -0.71
NUP188-203ENST00000465344 CADPSQ9ULU8 1353 aa10.57□□□□□ -0.72
NUP188-203ENST00000465344 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
NUP188-203ENST00000465344 LHX8Q68G74 356 aa10.57□□□□□ -0.72
NUP188-203ENST00000465344 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
NUP188-203ENST00000465344 TTLL13PA6NNM8 815 aa10.54□□□□□ -0.72
NUP188-203ENST00000465344 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
NUP188-203ENST00000465344 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
NUP188-203ENST00000465344 C7P10643 843 aa10.52□□□□□ -0.73
NUP188-203ENST00000465344 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
NUP188-203ENST00000465344 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
NUP188-203ENST00000465344 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
NUP188-203ENST00000465344 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
NUP188-203ENST00000465344 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
NUP188-203ENST00000465344 WIZO95785 1651 aa10.49□□□□□ -0.73
NUP188-203ENST00000465344 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
NUP188-203ENST00000465344 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
NUP188-203ENST00000465344 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
NUP188-203ENST00000465344 IER5LQ5T953 404 aa10.45□□□□□ -0.74
NUP188-203ENST00000465344 MRC2Q9UBG0 1479 aa10.43□□□□□ -0.74
NUP188-203ENST00000465344 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
NUP188-203ENST00000465344 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
NUP188-203ENST00000465344 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
NUP188-203ENST00000465344 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
NUP188-203ENST00000465344 CFTRP13569 1480 aa10.4□□□□□ -0.74
NUP188-203ENST00000465344 KIF21AQ7Z4S6 1674 aa10.39□□□□□ -0.75
NUP188-203ENST00000465344 PSEN1P49768 467 aa10.39□□□□□ -0.75
NUP188-203ENST00000465344 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
NUP188-203ENST00000465344 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
NUP188-203ENST00000465344 COLQQ9Y215 455 aaPredicted RBP10.36□□□□□ -0.75
NUP188-203ENST00000465344 WDR62O43379 1518 aa10.35□□□□□ -0.75
NUP188-203ENST00000465344 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
NUP188-203ENST00000465344 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
NUP188-203ENST00000465344 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
NUP188-203ENST00000465344 SEC24BO95487 1268 aa10.34□□□□□ -0.75
NUP188-203ENST00000465344 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
NUP188-203ENST00000465344 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
NUP188-203ENST00000465344 RIOK3O14730 519 aaKnown RBP10.3□□□□□ -0.76
NUP188-203ENST00000465344 PKD2Q13563 968 aa10.3□□□□□ -0.76
NUP188-203ENST00000465344 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
NUP188-203ENST00000465344 OCEL1Q9H607 264 aa10.29□□□□□ -0.76
NUP188-203ENST00000465344 PLCG2P16885 1265 aa10.28□□□□□ -0.76
NUP188-203ENST00000465344 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
NUP188-203ENST00000465344 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
NUP188-203ENST00000465344 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
NUP188-203ENST00000465344 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
NUP188-203ENST00000465344 ILDR1Q86SU0 546 aaPredicted RBP10.26□□□□□ -0.77
NUP188-203ENST00000465344 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms