RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 ANP32CO43423 234 aa9.64□□□□□ -0.87
PBX1-204ENST00000465089 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
PBX1-204ENST00000465089 DHX8Q14562 1220 aaKnown RBP9.64□□□□□ -0.87
PBX1-204ENST00000465089 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
PBX1-204ENST00000465089 CCDC136Q96JN2 1154 aa9.63□□□□□ -0.87
PBX1-204ENST00000465089 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
PBX1-204ENST00000465089 ESF1Q9H501 851 aaKnown RBP9.63□□□□□ -0.87
PBX1-204ENST00000465089 SETQ01105 290 aaPredicted RBP9.63□□□□□ -0.87
PBX1-204ENST00000465089 FEZ1Q99689 392 aa9.62□□□□□ -0.87
PBX1-204ENST00000465089 HMMRO75330 724 aa9.61□□□□□ -0.87
PBX1-204ENST00000465089 IRX6P78412 446 aaPredicted RBP9.61□□□□□ -0.87
PBX1-204ENST00000465089 PHF14O94880 888 aa9.6□□□□□ -0.87
PBX1-204ENST00000465089 KIF3AQ9Y496 699 aa9.6□□□□□ -0.87
PBX1-204ENST00000465089 BAZ1BQ9UIG0 1483 aaKnown RBP9.59□□□□□ -0.87
PBX1-204ENST00000465089 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
PBX1-204ENST00000465089 RDXP35241 583 aaKnown RBP9.58□□□□□ -0.88
PBX1-204ENST00000465089 EEA1Q15075 1411 aa9.58□□□□□ -0.88
PBX1-204ENST00000465089 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
PBX1-204ENST00000465089 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
PBX1-204ENST00000465089 SYAP1Q96A49 352 aaPredicted RBP9.55□□□□□ -0.88
PBX1-204ENST00000465089 DEF6Q9H4E7 631 aa9.53□□□□□ -0.88
PBX1-204ENST00000465089 FOXD1Q16676 465 aa9.53□□□□□ -0.88
PBX1-204ENST00000465089 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
PBX1-204ENST00000465089 GPS2Q13227 327 aa9.52□□□□□ -0.89
PBX1-204ENST00000465089 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
PBX1-204ENST00000465089 RTN4Q9NQC3 1192 aaKnown RBP9.52□□□□□ -0.89
PBX1-204ENST00000465089 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
PBX1-204ENST00000465089 CDR1P51861 262 aa9.51□□□□□ -0.89
PBX1-204ENST00000465089 FAM50AQ14320 339 aaKnown RBP9.51□□□□□ -0.89
PBX1-204ENST00000465089 MTERF4Q7Z6M4 381 aaKnown RBP9.5□□□□□ -0.89
PBX1-204ENST00000465089 BAZ1AQ9NRL2 1556 aaPredicted RBP9.5□□□□□ -0.89
PBX1-204ENST00000465089 PCGF6Q9BYE7 350 aa9.5□□□□□ -0.89
PBX1-204ENST00000465089 TPM4P67936 248 aa9.49□□□□□ -0.89
PBX1-204ENST00000465089 NAP1L5Q96NT1 182 aaPredicted RBP9.49□□□□□ -0.89
PBX1-204ENST00000465089 TIMELESSQ9UNS1 1208 aa9.49□□□□□ -0.89
PBX1-204ENST00000465089 WASHC2AQ641Q2 1341 aa9.48□□□□□ -0.89
PBX1-204ENST00000465089 CCDC112Q8NEF3 446 aa9.48□□□□□ -0.89
PBX1-204ENST00000465089 HDGFP51858 240 aaKnown RBP9.47□□□□□ -0.89
PBX1-204ENST00000465089 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
PBX1-204ENST00000465089 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.89
PBX1-204ENST00000465089 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.89
PBX1-204ENST00000465089 KRI1Q8N9T8 703 aaKnown RBP9.46□□□□□ -0.89
PBX1-204ENST00000465089 ZRSR2Q15696 482 aaKnown RBP9.45□□□□□ -0.9
PBX1-204ENST00000465089 MYO6Q9UM54 1294 aa9.45□□□□□ -0.9
PBX1-204ENST00000465089 LRRFIP1Q32MZ4 808 aaKnown RBP9.45□□□□□ -0.9
PBX1-204ENST00000465089 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
PBX1-204ENST00000465089 MCCP23508 829 aa9.44□□□□□ -0.9
PBX1-204ENST00000465089 CALD1Q05682 793 aaKnown RBP9.43□□□□□ -0.9
PBX1-204ENST00000465089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.43□□□□□ -0.9
PBX1-204ENST00000465089 HNRNPUL2Q1KMD3 747 aaKnown RBP9.43□□□□□ -0.9
PBX1-204ENST00000465089 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
PBX1-204ENST00000465089 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
PBX1-204ENST00000465089 TXLNBQ8N3L3 684 aa9.42□□□□□ -0.9
PBX1-204ENST00000465089 RSPH6AQ9H0K4 717 aa9.42□□□□□ -0.9
PBX1-204ENST00000465089 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
PBX1-204ENST00000465089 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
PBX1-204ENST00000465089 HSP90AA2PQ14568 343 aaPredicted RBP9.41□□□□□ -0.9
PBX1-204ENST00000465089 KIF16BQ96L93 1317 aa9.4□□□□□ -0.9
PBX1-204ENST00000465089 DCTN1Q14203 1278 aa9.4□□□□□ -0.9
PBX1-204ENST00000465089 SLC4A1APQ9BWU0 796 aaKnown RBP9.4□□□□□ -0.9
PBX1-204ENST00000465089 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
PBX1-204ENST00000465089 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
PBX1-204ENST00000465089 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
PBX1-204ENST00000465089 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
PBX1-204ENST00000465089 PES1O00541 588 aaKnown RBP9.39□□□□□ -0.91
PBX1-204ENST00000465089 TPM3P06753 285 aa9.38□□□□□ -0.91
PBX1-204ENST00000465089 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
PBX1-204ENST00000465089 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
PBX1-204ENST00000465089 SCAPERQ9BY12 1400 aa9.38□□□□□ -0.91
PBX1-204ENST00000465089 NF2P35240 595 aa9.37□□□□□ -0.91
PBX1-204ENST00000465089 HMGN5P82970 282 aaKnown RBP9.37□□□□□ -0.91
PBX1-204ENST00000465089 RBM19Q9Y4C8 960 aaKnown RBP9.37□□□□□ -0.91
PBX1-204ENST00000465089 NPM1P06748 294 aaKnown RBP eCLIP9.37□□□□□ -0.91
PBX1-204ENST00000465089 CLIP1P30622 1438 aa9.37□□□□□ -0.91
PBX1-204ENST00000465089 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
PBX1-204ENST00000465089 MSNP26038 577 aaKnown RBP9.36□□□□□ -0.91
PBX1-204ENST00000465089 DNAI2Q9GZS0 605 aa9.36□□□□□ -0.91
PBX1-204ENST00000465089 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
PBX1-204ENST00000465089 TONSLQ96HA7 1378 aa9.35□□□□□ -0.91
PBX1-204ENST00000465089 RB1CC1Q8TDY2 1594 aa9.35□□□□□ -0.91
PBX1-204ENST00000465089 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
PBX1-204ENST00000465089 AAMPQ13685 434 aa9.35□□□□□ -0.91
PBX1-204ENST00000465089 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
PBX1-204ENST00000465089 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
PBX1-204ENST00000465089 EIF3AQ14152 1382 aaKnown RBP9.34□□□□□ -0.91
PBX1-204ENST00000465089 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
PBX1-204ENST00000465089 CAVIN1Q6NZI2 390 aaKnown RBP9.34□□□□□ -0.91
PBX1-204ENST00000465089 ACBD3Q9H3P7 528 aa9.34□□□□□ -0.92
PBX1-204ENST00000465089 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
PBX1-204ENST00000465089 GOLGA6L7A0A1B0GV03 622 aa9.33□□□□□ -0.92
PBX1-204ENST00000465089 INCENPQ9NQS7 918 aa9.33□□□□□ -0.92
PBX1-204ENST00000465089 MIER1Q8N108 512 aa9.32□□□□□ -0.92
PBX1-204ENST00000465089 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
PBX1-204ENST00000465089 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
PBX1-204ENST00000465089 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
PBX1-204ENST00000465089 SP100P23497 879 aaPredicted RBP9.31□□□□□ -0.92
PBX1-204ENST00000465089 PLPPR3Q6T4P5 718 aa9.31□□□□□ -0.92
PBX1-204ENST00000465089 TPM2P07951 284 aa9.31□□□□□ -0.92
PBX1-204ENST00000465089 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
PBX1-204ENST00000465089 FYB1O15117 783 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms