RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 RNF39Q9H2S5 420 aa9.93□□□□□ -0.82
HOXB3-203ENST00000464266 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
HOXB3-203ENST00000464266 GSE1Q14687 1217 aa9.91□□□□□ -0.82
HOXB3-203ENST00000464266 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
HOXB3-203ENST00000464266 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
HOXB3-203ENST00000464266 GTPBP6O43824 516 aaPredicted RBP9.89□□□□□ -0.83
HOXB3-203ENST00000464266 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
HOXB3-203ENST00000464266 C1QBPQ07021 282 aaKnown RBP9.87□□□□□ -0.83
HOXB3-203ENST00000464266 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
HOXB3-203ENST00000464266 HOMEZQ8IX15 550 aa9.86□□□□□ -0.83
HOXB3-203ENST00000464266 NISCHQ9Y2I1 1504 aa9.83□□□□□ -0.84
HOXB3-203ENST00000464266 STK25O00506 426 aa9.82□□□□□ -0.84
HOXB3-203ENST00000464266 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
HOXB3-203ENST00000464266 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
HOXB3-203ENST00000464266 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
HOXB3-203ENST00000464266 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
HOXB3-203ENST00000464266 NUBP1P53384 320 aa9.75□□□□□ -0.85
HOXB3-203ENST00000464266 DSG3P32926 999 aa9.74□□□□□ -0.85
HOXB3-203ENST00000464266 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
HOXB3-203ENST00000464266 STK24Q9Y6E0 443 aa9.71□□□□□ -0.86
HOXB3-203ENST00000464266 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
HOXB3-203ENST00000464266 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
HOXB3-203ENST00000464266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
HOXB3-203ENST00000464266 SGIP1Q9BQI5 828 aa9.68□□□□□ -0.86
HOXB3-203ENST00000464266 WDR70Q9NW82 654 aa9.68□□□□□ -0.86
HOXB3-203ENST00000464266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
HOXB3-203ENST00000464266 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
HOXB3-203ENST00000464266 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
HOXB3-203ENST00000464266 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
HOXB3-203ENST00000464266 KCNV2Q8TDN2 545 aa9.64□□□□□ -0.87
HOXB3-203ENST00000464266 ABCC9O60706 1549 aa9.64□□□□□ -0.87
HOXB3-203ENST00000464266 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
HOXB3-203ENST00000464266 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
HOXB3-203ENST00000464266 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
HOXB3-203ENST00000464266 PYGBP11216 843 aa9.53□□□□□ -0.88
HOXB3-203ENST00000464266 RASEFQ8IZ41 740 aa9.53□□□□□ -0.88
HOXB3-203ENST00000464266 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
HOXB3-203ENST00000464266 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
HOXB3-203ENST00000464266 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
HOXB3-203ENST00000464266 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
HOXB3-203ENST00000464266 ARHGEF1Q92888 912 aaKnown RBP9.49□□□□□ -0.89
HOXB3-203ENST00000464266 SLC24A3Q9HC58 644 aa9.49□□□□□ -0.89
HOXB3-203ENST00000464266 PRR29P0C7W0 189 aa9.48□□□□□ -0.89
HOXB3-203ENST00000464266 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
HOXB3-203ENST00000464266 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
HOXB3-203ENST00000464266 E2F4Q16254 413 aa9.42□□□□□ -0.9
HOXB3-203ENST00000464266 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
HOXB3-203ENST00000464266 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
HOXB3-203ENST00000464266 SEMA3EO15041 775 aa9.41□□□□□ -0.9
HOXB3-203ENST00000464266 PDAP1Q13442 181 aaKnown RBP9.39□□□□□ -0.91
HOXB3-203ENST00000464266 ZMYND10O75800 440 aa9.38□□□□□ -0.91
HOXB3-203ENST00000464266 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
HOXB3-203ENST00000464266 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
HOXB3-203ENST00000464266 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
HOXB3-203ENST00000464266 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
HOXB3-203ENST00000464266 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
HOXB3-203ENST00000464266 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
HOXB3-203ENST00000464266 PPP1R37O75864 691 aa9.3□□□□□ -0.92
HOXB3-203ENST00000464266 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
HOXB3-203ENST00000464266 PCDHB8Q9UN66 801 aa9.3□□□□□ -0.92
HOXB3-203ENST00000464266 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
HOXB3-203ENST00000464266 PSEN1P49768 467 aa9.29□□□□□ -0.92
HOXB3-203ENST00000464266 RBM42Q9BTD8 480 aaKnown RBP9.29□□□□□ -0.92
HOXB3-203ENST00000464266 RSPH6AQ9H0K4 717 aa9.29□□□□□ -0.92
HOXB3-203ENST00000464266 TSPYL2Q9H2G4 693 aaPredicted RBP9.29□□□□□ -0.92
HOXB3-203ENST00000464266 AK7Q96M32 723 aa9.28□□□□□ -0.92
HOXB3-203ENST00000464266 NLRP6P59044 892 aa9.27□□□□□ -0.93
HOXB3-203ENST00000464266 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
HOXB3-203ENST00000464266 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
HOXB3-203ENST00000464266 IL27Q8NEV9 243 aa9.25□□□□□ -0.93
HOXB3-203ENST00000464266 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
HOXB3-203ENST00000464266 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
HOXB3-203ENST00000464266 PDE4AP27815 886 aa9.23□□□□□ -0.93
HOXB3-203ENST00000464266 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
HOXB3-203ENST00000464266 FBXO22Q8NEZ5 403 aa9.23□□□□□ -0.93
HOXB3-203ENST00000464266 SOX12O15370 315 aa9.22□□□□□ -0.93
HOXB3-203ENST00000464266 TRIM26Q12899 539 aaPredicted RBP9.21□□□□□ -0.94
HOXB3-203ENST00000464266 EFCAB3Q8N7B9 438 aa9.21□□□□□ -0.94
HOXB3-203ENST00000464266 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
HOXB3-203ENST00000464266 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
HOXB3-203ENST00000464266 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
HOXB3-203ENST00000464266 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
HOXB3-203ENST00000464266 PHF8Q9UPP1 1060 aa9.2□□□□□ -0.94
HOXB3-203ENST00000464266 CCDC180Q9P1Z9 1646 aa9.2□□□□□ -0.94
HOXB3-203ENST00000464266 MFSD10Q14728 455 aa9.18□□□□□ -0.94
HOXB3-203ENST00000464266 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
HOXB3-203ENST00000464266 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
HOXB3-203ENST00000464266 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
HOXB3-203ENST00000464266 ARID3AQ99856 593 aa9.17□□□□□ -0.94
HOXB3-203ENST00000464266 PDE4DQ08499 809 aa9.15□□□□□ -0.94
HOXB3-203ENST00000464266 TRIM66O15016 1216 aa9.14□□□□□ -0.95
HOXB3-203ENST00000464266 CCDC61Q9Y6R9 512 aa9.14□□□□□ -0.95
HOXB3-203ENST00000464266 PITPNM1O00562 1244 aa9.13□□□□□ -0.95
HOXB3-203ENST00000464266 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
HOXB3-203ENST00000464266 CRISPLD2Q9H0B8 497 aa9.13□□□□□ -0.95
HOXB3-203ENST00000464266 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
HOXB3-203ENST00000464266 HRCP23327 699 aa9.11□□□□□ -0.95
HOXB3-203ENST00000464266 CHADLQ6NUI6 762 aa9.11□□□□□ -0.95
HOXB3-203ENST00000464266 IFNL1Q8IU54 200 aa9.11□□□□□ -0.95
HOXB3-203ENST00000464266 CACNB1Q02641 598 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms