RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
VPS8-216ENST00000463687 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
VPS8-216ENST00000463687 PKD2Q13563 968 aa12.52□□□□□ -0.41
VPS8-216ENST00000463687 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
VPS8-216ENST00000463687 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
VPS8-216ENST00000463687 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
VPS8-216ENST00000463687 GABBR2O75899 941 aa12.44□□□□□ -0.42
VPS8-216ENST00000463687 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
VPS8-216ENST00000463687 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
VPS8-216ENST00000463687 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
VPS8-216ENST00000463687 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
VPS8-216ENST00000463687 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
VPS8-216ENST00000463687 CECR2Q9BXF3 1484 aa12.38□□□□□ -0.43
VPS8-216ENST00000463687 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
VPS8-216ENST00000463687 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
VPS8-216ENST00000463687 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
VPS8-216ENST00000463687 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
VPS8-216ENST00000463687 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.44
VPS8-216ENST00000463687 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
VPS8-216ENST00000463687 LHX8Q68G74 356 aa12.28□□□□□ -0.44
VPS8-216ENST00000463687 MIER1Q8N108 512 aa12.28□□□□□ -0.44
VPS8-216ENST00000463687 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
VPS8-216ENST00000463687 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
VPS8-216ENST00000463687 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
VPS8-216ENST00000463687 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
VPS8-216ENST00000463687 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS8-216ENST00000463687 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
VPS8-216ENST00000463687 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
VPS8-216ENST00000463687 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
VPS8-216ENST00000463687 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
VPS8-216ENST00000463687 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
VPS8-216ENST00000463687 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
VPS8-216ENST00000463687 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
VPS8-216ENST00000463687 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
VPS8-216ENST00000463687 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
VPS8-216ENST00000463687 RGL2O15211 777 aa12.15□□□□□ -0.46
VPS8-216ENST00000463687 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
VPS8-216ENST00000463687 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
VPS8-216ENST00000463687 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
VPS8-216ENST00000463687 NBR1Q14596 966 aa12.13□□□□□ -0.47
VPS8-216ENST00000463687 CLCN6P51797 869 aa12.12□□□□□ -0.47
VPS8-216ENST00000463687 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
VPS8-216ENST00000463687 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
VPS8-216ENST00000463687 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
VPS8-216ENST00000463687 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
VPS8-216ENST00000463687 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
VPS8-216ENST00000463687 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
VPS8-216ENST00000463687 WIZO95785 1651 aa12.03□□□□□ -0.48
VPS8-216ENST00000463687 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
VPS8-216ENST00000463687 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
VPS8-216ENST00000463687 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
VPS8-216ENST00000463687 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
VPS8-216ENST00000463687 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
VPS8-216ENST00000463687 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
VPS8-216ENST00000463687 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
VPS8-216ENST00000463687 NUBP1P53384 320 aa11.93□□□□□ -0.5
VPS8-216ENST00000463687 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
VPS8-216ENST00000463687 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
VPS8-216ENST00000463687 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
VPS8-216ENST00000463687 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
VPS8-216ENST00000463687 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
VPS8-216ENST00000463687 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
VPS8-216ENST00000463687 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
VPS8-216ENST00000463687 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
VPS8-216ENST00000463687 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
VPS8-216ENST00000463687 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
VPS8-216ENST00000463687 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
VPS8-216ENST00000463687 NESP48681 1621 aa11.86□□□□□ -0.51
VPS8-216ENST00000463687 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
VPS8-216ENST00000463687 CFTRP13569 1480 aa11.83□□□□□ -0.52
VPS8-216ENST00000463687 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
VPS8-216ENST00000463687 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
VPS8-216ENST00000463687 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
VPS8-216ENST00000463687 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
VPS8-216ENST00000463687 GSE1Q14687 1217 aa11.78□□□□□ -0.52
VPS8-216ENST00000463687 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
VPS8-216ENST00000463687 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
VPS8-216ENST00000463687 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
VPS8-216ENST00000463687 ARXQ96QS3 562 aa11.73□□□□□ -0.53
VPS8-216ENST00000463687 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
VPS8-216ENST00000463687 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
VPS8-216ENST00000463687 PYGBP11216 843 aa11.71□□□□□ -0.53
VPS8-216ENST00000463687 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
VPS8-216ENST00000463687 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
VPS8-216ENST00000463687 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
VPS8-216ENST00000463687 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
VPS8-216ENST00000463687 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
VPS8-216ENST00000463687 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
VPS8-216ENST00000463687 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
VPS8-216ENST00000463687 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
VPS8-216ENST00000463687 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
VPS8-216ENST00000463687 CUX2O14529 1486 aa11.65□□□□□ -0.54
VPS8-216ENST00000463687 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
VPS8-216ENST00000463687 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
VPS8-216ENST00000463687 STK25O00506 426 aa11.63□□□□□ -0.55
VPS8-216ENST00000463687 ATMINO43313 823 aaPredicted RBP11.63□□□□□ -0.55
VPS8-216ENST00000463687 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
VPS8-216ENST00000463687 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
VPS8-216ENST00000463687 C7P10643 843 aa11.6□□□□□ -0.55
VPS8-216ENST00000463687 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms