RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
COL4A2-204ENST00000463084 KIF27Q86VH2 1401 aa22.79■■□□□ 1.24
COL4A2-204ENST00000463084 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
COL4A2-204ENST00000463084 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
COL4A2-204ENST00000463084 IGF1RP08069 1367 aa22.73■■□□□ 1.23
COL4A2-204ENST00000463084 KIAA0586Q9BVV6 1533 aa22.71■■□□□ 1.23
COL4A2-204ENST00000463084 CUL7Q14999 1698 aa22.68■■□□□ 1.22
COL4A2-204ENST00000463084 KIF13AQ9H1H9 1805 aa22.66■■□□□ 1.22
COL4A2-204ENST00000463084 ABCC10Q5T3U5 1492 aa22.64■■□□□ 1.21
COL4A2-204ENST00000463084 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
COL4A2-204ENST00000463084 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
COL4A2-204ENST00000463084 MAPKBP1O60336 1514 aa22.61■■□□□ 1.21
COL4A2-204ENST00000463084 PTPRGP23470 1445 aa22.59■■□□□ 1.21
COL4A2-204ENST00000463084 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
COL4A2-204ENST00000463084 DIP2BQ9P265 1576 aa22.56■■□□□ 1.2
COL4A2-204ENST00000463084 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
COL4A2-204ENST00000463084 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
COL4A2-204ENST00000463084 KDM6BO15054 1643 aa22.47■■□□□ 1.19
COL4A2-204ENST00000463084 TSPOAP1O95153 1857 aa22.45■■□□□ 1.19
COL4A2-204ENST00000463084 ABCC2Q92887 1545 aa22.43■■□□□ 1.18
COL4A2-204ENST00000463084 ASXL2Q76L83 1435 aa22.4■■□□□ 1.18
COL4A2-204ENST00000463084 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
COL4A2-204ENST00000463084 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
COL4A2-204ENST00000463084 PLB1Q6P1J6 1458 aa22.38■■□□□ 1.17
COL4A2-204ENST00000463084 DISP1Q96F81 1524 aa22.34■■□□□ 1.17
COL4A2-204ENST00000463084 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
COL4A2-204ENST00000463084 UGGT2Q9NYU1 1516 aa22.29■■□□□ 1.16
COL4A2-204ENST00000463084 KDM4FA0A1W2PPD8 638 aa22.27■■□□□ 1.16
COL4A2-204ENST00000463084 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
COL4A2-204ENST00000463084 GLI2P10070 1586 aa22.25■■□□□ 1.15
COL4A2-204ENST00000463084 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
COL4A2-204ENST00000463084 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
COL4A2-204ENST00000463084 ZCCHC11Q5TAX3 1644 aaKnown RBP22.21■■□□□ 1.15
COL4A2-204ENST00000463084 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
COL4A2-204ENST00000463084 TEX14Q8IWB6 1497 aa22.19■■□□□ 1.14
COL4A2-204ENST00000463084 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
COL4A2-204ENST00000463084 PPRC1Q5VV67 1664 aaKnown RBP22.17■■□□□ 1.14
COL4A2-204ENST00000463084 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
COL4A2-204ENST00000463084 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
COL4A2-204ENST00000463084 WDR7Q9Y4E6 1490 aa22.15■■□□□ 1.14
COL4A2-204ENST00000463084 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
COL4A2-204ENST00000463084 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
COL4A2-204ENST00000463084 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
COL4A2-204ENST00000463084 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
COL4A2-204ENST00000463084 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
COL4A2-204ENST00000463084 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
COL4A2-204ENST00000463084 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
COL4A2-204ENST00000463084 ABCA8O94911 1581 aa22.04■■□□□ 1.12
COL4A2-204ENST00000463084 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
COL4A2-204ENST00000463084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
COL4A2-204ENST00000463084 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
COL4A2-204ENST00000463084 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
COL4A2-204ENST00000463084 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
COL4A2-204ENST00000463084 CFAP43Q8NDM7 1665 aa21.96■■□□□ 1.11
COL4A2-204ENST00000463084 ATP10BO94823 1461 aa21.89■■□□□ 1.09
COL4A2-204ENST00000463084 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.08
COL4A2-204ENST00000463084 HECW2Q9P2P5 1572 aa21.82■■□□□ 1.08
COL4A2-204ENST00000463084 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
COL4A2-204ENST00000463084 EEA1Q15075 1411 aa21.8■■□□□ 1.08
COL4A2-204ENST00000463084 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
COL4A2-204ENST00000463084 KIF21BO75037 1637 aa21.8■■□□□ 1.08
COL4A2-204ENST00000463084 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
COL4A2-204ENST00000463084 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
COL4A2-204ENST00000463084 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
COL4A2-204ENST00000463084 ARAP3Q8WWN8 1544 aa21.78■■□□□ 1.08
COL4A2-204ENST00000463084 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
COL4A2-204ENST00000463084 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.07
COL4A2-204ENST00000463084 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
COL4A2-204ENST00000463084 PLEKHD1A6NEE1 506 aa21.74■■□□□ 1.07
COL4A2-204ENST00000463084 NUP153P49790 1475 aaKnown RBP21.73■■□□□ 1.07
COL4A2-204ENST00000463084 NEO1Q92859 1461 aa21.71■■□□□ 1.07
COL4A2-204ENST00000463084 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
COL4A2-204ENST00000463084 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
COL4A2-204ENST00000463084 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
COL4A2-204ENST00000463084 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
COL4A2-204ENST00000463084 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
COL4A2-204ENST00000463084 PTPRMP28827 1452 aa21.61■■□□□ 1.05
COL4A2-204ENST00000463084 FANCAO15360 1455 aa21.6■■□□□ 1.05
COL4A2-204ENST00000463084 AKNAQ7Z591 1439 aa21.59■■□□□ 1.05
COL4A2-204ENST00000463084 FRMPD1Q5SYB0 1578 aa21.58■■□□□ 1.05
COL4A2-204ENST00000463084 CDK13Q14004 1512 aaKnown RBP21.57■■□□□ 1.04
COL4A2-204ENST00000463084 CFAP74Q9C0B2 1584 aa21.57■■□□□ 1.04
COL4A2-204ENST00000463084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.55■■□□□ 1.04
COL4A2-204ENST00000463084 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
COL4A2-204ENST00000463084 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
COL4A2-204ENST00000463084 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
COL4A2-204ENST00000463084 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
COL4A2-204ENST00000463084 BCORL1Q5H9F3 1711 aa21.52■■□□□ 1.04
COL4A2-204ENST00000463084 MLECQ14165 292 aa21.52■■□□□ 1.04
COL4A2-204ENST00000463084 POGZQ7Z3K3 1410 aa21.51■■□□□ 1.03
COL4A2-204ENST00000463084 CDK11AQ9UQ88 783 aaPredicted RBP21.5■■□□□ 1.03
COL4A2-204ENST00000463084 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
COL4A2-204ENST00000463084 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
COL4A2-204ENST00000463084 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
COL4A2-204ENST00000463084 RICTORQ6R327 1708 aa21.47■■□□□ 1.03
COL4A2-204ENST00000463084 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
COL4A2-204ENST00000463084 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
COL4A2-204ENST00000463084 SCAPERQ9BY12 1400 aa21.46■■□□□ 1.03
COL4A2-204ENST00000463084 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
COL4A2-204ENST00000463084 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms