RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
PCCB-203ENST00000462542 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
PCCB-203ENST00000462542 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
PCCB-203ENST00000462542 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
PCCB-203ENST00000462542 RUSC2Q8N2Y8 1516 aa20.79■□□□□ 0.92
PCCB-203ENST00000462542 DIP2BQ9P265 1576 aa20.79■□□□□ 0.92
PCCB-203ENST00000462542 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
PCCB-203ENST00000462542 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
PCCB-203ENST00000462542 KIAA0586Q9BVV6 1533 aa20.76■□□□□ 0.91
PCCB-203ENST00000462542 KDM6BO15054 1643 aa20.74■□□□□ 0.91
PCCB-203ENST00000462542 IGF1RP08069 1367 aa20.71■□□□□ 0.91
PCCB-203ENST00000462542 PTPRGP23470 1445 aa20.67■□□□□ 0.9
PCCB-203ENST00000462542 TSPOAP1O95153 1857 aa20.67■□□□□ 0.9
PCCB-203ENST00000462542 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
PCCB-203ENST00000462542 CUL7Q14999 1698 aa20.61■□□□□ 0.89
PCCB-203ENST00000462542 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
PCCB-203ENST00000462542 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
PCCB-203ENST00000462542 PLB1Q6P1J6 1458 aa20.58■□□□□ 0.89
PCCB-203ENST00000462542 ILDR1Q86SU0 546 aaPredicted RBP20.57■□□□□ 0.88
PCCB-203ENST00000462542 ABCC2Q92887 1545 aa20.57■□□□□ 0.88
PCCB-203ENST00000462542 TTBK1Q5TCY1 1321 aaPredicted RBP20.56■□□□□ 0.88
PCCB-203ENST00000462542 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
PCCB-203ENST00000462542 ASXL2Q76L83 1435 aa20.54■□□□□ 0.88
PCCB-203ENST00000462542 GLI2P10070 1586 aa20.54■□□□□ 0.88
PCCB-203ENST00000462542 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
PCCB-203ENST00000462542 UACAQ9BZF9 1416 aa20.48■□□□□ 0.87
PCCB-203ENST00000462542 PPRC1Q5VV67 1664 aaKnown RBP20.45■□□□□ 0.86
PCCB-203ENST00000462542 ADGRL1O94910 1474 aa20.45■□□□□ 0.86
PCCB-203ENST00000462542 IQGAP2Q13576 1575 aa20.44■□□□□ 0.86
PCCB-203ENST00000462542 TEX14Q8IWB6 1497 aa20.41■□□□□ 0.86
PCCB-203ENST00000462542 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
PCCB-203ENST00000462542 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
PCCB-203ENST00000462542 COL17A1Q9UMD9 1497 aaPredicted RBP20.4■□□□□ 0.86
PCCB-203ENST00000462542 DISP1Q96F81 1524 aa20.38■□□□□ 0.85
PCCB-203ENST00000462542 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
PCCB-203ENST00000462542 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
PCCB-203ENST00000462542 ZCCHC11Q5TAX3 1644 aaKnown RBP20.3■□□□□ 0.84
PCCB-203ENST00000462542 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
PCCB-203ENST00000462542 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
PCCB-203ENST00000462542 WDR7Q9Y4E6 1490 aa20.26■□□□□ 0.83
PCCB-203ENST00000462542 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
PCCB-203ENST00000462542 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
PCCB-203ENST00000462542 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
PCCB-203ENST00000462542 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
PCCB-203ENST00000462542 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
PCCB-203ENST00000462542 CFAP43Q8NDM7 1665 aa20.17■□□□□ 0.82
PCCB-203ENST00000462542 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
PCCB-203ENST00000462542 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
PCCB-203ENST00000462542 ABCA8O94911 1581 aa20.1■□□□□ 0.81
PCCB-203ENST00000462542 PHLDB1Q86UU1 1377 aa20.09■□□□□ 0.81
PCCB-203ENST00000462542 ARAP3Q8WWN8 1544 aa20.08■□□□□ 0.81
PCCB-203ENST00000462542 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
PCCB-203ENST00000462542 KIF21BO75037 1637 aa20.02■□□□□ 0.79
PCCB-203ENST00000462542 ATP10BO94823 1461 aa19.98■□□□□ 0.79
PCCB-203ENST00000462542 PTPRMP28827 1452 aa19.98■□□□□ 0.79
PCCB-203ENST00000462542 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
PCCB-203ENST00000462542 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
PCCB-203ENST00000462542 ADAMTSL3P82987 1691 aa19.94■□□□□ 0.78
PCCB-203ENST00000462542 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
PCCB-203ENST00000462542 NEO1Q92859 1461 aa19.93■□□□□ 0.78
PCCB-203ENST00000462542 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
PCCB-203ENST00000462542 ABCA9Q8IUA7 1624 aa19.93■□□□□ 0.78
PCCB-203ENST00000462542 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
PCCB-203ENST00000462542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.88■□□□□ 0.77
PCCB-203ENST00000462542 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
PCCB-203ENST00000462542 BCORL1Q5H9F3 1711 aa19.85■□□□□ 0.77
PCCB-203ENST00000462542 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
PCCB-203ENST00000462542 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
PCCB-203ENST00000462542 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
PCCB-203ENST00000462542 MADDQ8WXG6 1647 aa19.8■□□□□ 0.76
PCCB-203ENST00000462542 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
PCCB-203ENST00000462542 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
PCCB-203ENST00000462542 DENND4BO75064 1496 aaPredicted RBP19.78■□□□□ 0.76
PCCB-203ENST00000462542 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
PCCB-203ENST00000462542 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
PCCB-203ENST00000462542 POGZQ7Z3K3 1410 aa19.76■□□□□ 0.75
PCCB-203ENST00000462542 FHOD3Q2V2M9 1422 aa19.75■□□□□ 0.75
PCCB-203ENST00000462542 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
PCCB-203ENST00000462542 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
PCCB-203ENST00000462542 HSPA2P54652 639 aa19.72■□□□□ 0.75
PCCB-203ENST00000462542 ARHGEF40Q8TER5 1519 aa19.71■□□□□ 0.75
PCCB-203ENST00000462542 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
PCCB-203ENST00000462542 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
PCCB-203ENST00000462542 FANCAO15360 1455 aa19.7■□□□□ 0.74
PCCB-203ENST00000462542 RICTORQ6R327 1708 aa19.7■□□□□ 0.74
PCCB-203ENST00000462542 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
PCCB-203ENST00000462542 MAGI2Q86UL8 1455 aa19.68■□□□□ 0.74
PCCB-203ENST00000462542 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
PCCB-203ENST00000462542 RANGAP1P46060 587 aaPredicted RBP19.66■□□□□ 0.74
PCCB-203ENST00000462542 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
PCCB-203ENST00000462542 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
PCCB-203ENST00000462542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.64■□□□□ 0.73
PCCB-203ENST00000462542 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
PCCB-203ENST00000462542 MLECQ14165 292 aa19.62■□□□□ 0.73
PCCB-203ENST00000462542 YEATS2Q9ULM3 1422 aa19.61■□□□□ 0.73
PCCB-203ENST00000462542 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
PCCB-203ENST00000462542 EEA1Q15075 1411 aa19.59■□□□□ 0.73
PCCB-203ENST00000462542 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
PCCB-203ENST00000462542 PLCH2O75038 1416 aa19.58■□□□□ 0.72
PCCB-203ENST00000462542 ATP10AO60312 1499 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms