RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 GSE1Q14687 1217 aa8.39□□□□□ -1.07
CDHR3-202ENST00000461766 DCAF1Q9Y4B6 1507 aa8.37□□□□□ -1.07
CDHR3-202ENST00000461766 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
CDHR3-202ENST00000461766 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
CDHR3-202ENST00000461766 CCDC180Q9P1Z9 1646 aa8.33□□□□□ -1.08
CDHR3-202ENST00000461766 DCAF8Q5TAQ9 597 aa8.33□□□□□ -1.08
CDHR3-202ENST00000461766 NPM1P06748 294 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDHR3-202ENST00000461766 MYO15BQ96JP2 1530 aa8.32□□□□□ -1.08
CDHR3-202ENST00000461766 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
CDHR3-202ENST00000461766 ABCC9O60706 1549 aa8.3□□□□□ -1.08
CDHR3-202ENST00000461766 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
CDHR3-202ENST00000461766 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
CDHR3-202ENST00000461766 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
CDHR3-202ENST00000461766 RNF25Q96BH1 459 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-202ENST00000461766 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-202ENST00000461766 CLCN6P51797 869 aa8.27□□□□□ -1.09
CDHR3-202ENST00000461766 MYT1Q01538 1121 aa8.27□□□□□ -1.09
CDHR3-202ENST00000461766 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
CDHR3-202ENST00000461766 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
CDHR3-202ENST00000461766 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-202ENST00000461766 C19orf67A6NJJ6 358 aa8.25□□□□□ -1.09
CDHR3-202ENST00000461766 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
CDHR3-202ENST00000461766 RIOK3O14730 519 aaKnown RBP8.24□□□□□ -1.09
CDHR3-202ENST00000461766 CHRM1P11229 460 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-202ENST00000461766 HS6ST3Q8IZP7 471 aa8.24□□□□□ -1.09
CDHR3-202ENST00000461766 PCGF6Q9BYE7 350 aa8.24□□□□□ -1.09
CDHR3-202ENST00000461766 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-202ENST00000461766 PAXIP1Q6ZW49 1069 aaPredicted RBP8.22□□□□□ -1.09
CDHR3-202ENST00000461766 TAOK2Q9UL54 1235 aa8.22□□□□□ -1.09
CDHR3-202ENST00000461766 ZEB1P37275 1124 aaPredicted RBP8.2□□□□□ -1.1
CDHR3-202ENST00000461766 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-202ENST00000461766 PYGBP11216 843 aa8.19□□□□□ -1.1
CDHR3-202ENST00000461766 EVX2Q03828 476 aa8.19□□□□□ -1.1
CDHR3-202ENST00000461766 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
CDHR3-202ENST00000461766 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
CDHR3-202ENST00000461766 GABBR2O75899 941 aa8.18□□□□□ -1.1
CDHR3-202ENST00000461766 SPRYD3Q8NCJ5 442 aa8.18□□□□□ -1.1
CDHR3-202ENST00000461766 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
CDHR3-202ENST00000461766 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-202ENST00000461766 LHX8Q68G74 356 aa8.16□□□□□ -1.1
CDHR3-202ENST00000461766 SGIP1Q9BQI5 828 aa8.16□□□□□ -1.1
CDHR3-202ENST00000461766 STK25O00506 426 aa8.14□□□□□ -1.11
CDHR3-202ENST00000461766 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
CDHR3-202ENST00000461766 VSIG10Q8N0Z9 540 aa8.14□□□□□ -1.11
CDHR3-202ENST00000461766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-202ENST00000461766 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-202ENST00000461766 CCDC61Q9Y6R9 512 aa8.12□□□□□ -1.11
CDHR3-202ENST00000461766 CD44P16070 742 aaKnown RBP8.11□□□□□ -1.11
CDHR3-202ENST00000461766 NKX1-1Q15270 411 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-202ENST00000461766 ZNF467Q7Z7K2 595 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-202ENST00000461766 PAK3O75914 559 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-202ENST00000461766 BCL11BQ9C0K0 894 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-202ENST00000461766 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
CDHR3-202ENST00000461766 DCBLD2Q96PD2 775 aa8.07□□□□□ -1.12
CDHR3-202ENST00000461766 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
CDHR3-202ENST00000461766 PDAP1Q13442 181 aaKnown RBP8.06□□□□□ -1.12
CDHR3-202ENST00000461766 KDM2AQ9Y2K7 1162 aa8.06□□□□□ -1.12
CDHR3-202ENST00000461766 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
CDHR3-202ENST00000461766 ZNF579Q8NAF0 562 aaKnown RBP8.05□□□□□ -1.12
CDHR3-202ENST00000461766 PCDHB8Q9UN66 801 aa8.05□□□□□ -1.12
CDHR3-202ENST00000461766 PCDHB13Q9Y5F0 798 aa8.05□□□□□ -1.12
CDHR3-202ENST00000461766 KIF12Q96FN5 646 aa8.02□□□□□ -1.13
CDHR3-202ENST00000461766 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
CDHR3-202ENST00000461766 PSEN1P49768 467 aa8.01□□□□□ -1.13
CDHR3-202ENST00000461766 ZRANB1Q9UGI0 708 aa8.01□□□□□ -1.13
CDHR3-202ENST00000461766 MAP3K13O43283 966 aa8□□□□□ -1.13
CDHR3-202ENST00000461766 IFNL1Q8IU54 200 aa8□□□□□ -1.13
CDHR3-202ENST00000461766 BCANQ96GW7 911 aa7.98□□□□□ -1.13
CDHR3-202ENST00000461766 PHF12Q96QT6 1004 aa7.96□□□□□ -1.14
CDHR3-202ENST00000461766 MFRPQ9BY79 579 aa7.92□□□□□ -1.14
CDHR3-202ENST00000461766 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
CDHR3-202ENST00000461766 LOC105371045A0A1W2PR82 267 aa7.9□□□□□ -1.14
CDHR3-202ENST00000461766 CABP2Q9NPB3 220 aa7.9□□□□□ -1.14
CDHR3-202ENST00000461766 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-202ENST00000461766 EFCAB3Q8N7B9 438 aa7.89□□□□□ -1.15
CDHR3-202ENST00000461766 MS4A3Q96HJ5 214 aa7.89□□□□□ -1.15
CDHR3-202ENST00000461766 SOX12O15370 315 aa7.87□□□□□ -1.15
CDHR3-202ENST00000461766 FBXO22Q8NEZ5 403 aa7.87□□□□□ -1.15
CDHR3-202ENST00000461766 NLRP6P59044 892 aa7.86□□□□□ -1.15
CDHR3-202ENST00000461766 PLSCR2Q9NRY7 297 aa7.86□□□□□ -1.15
CDHR3-202ENST00000461766 POTEIP0CG38 1075 aa7.85□□□□□ -1.15
CDHR3-202ENST00000461766 TMEM106CQ9BVX2 250 aa7.85□□□□□ -1.15
CDHR3-202ENST00000461766 PHF8Q9UPP1 1060 aa7.85□□□□□ -1.15
CDHR3-202ENST00000461766 TRPC6Q9Y210 931 aa7.85□□□□□ -1.15
CDHR3-202ENST00000461766 TIE1P35590 1138 aa7.82□□□□□ -1.16
CDHR3-202ENST00000461766 GOLGA2Q08379 1002 aa7.82□□□□□ -1.16
CDHR3-202ENST00000461766 CADPS2Q86UW7 1296 aa7.82□□□□□ -1.16
CDHR3-202ENST00000461766 RB1CC1Q8TDY2 1594 aa7.82□□□□□ -1.16
CDHR3-202ENST00000461766 PPP1R37O75864 691 aa7.81□□□□□ -1.16
CDHR3-202ENST00000461766 TTBK1Q5TCY1 1321 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-202ENST00000461766 NBR1Q14596 966 aa7.8□□□□□ -1.16
CDHR3-202ENST00000461766 MAMSTRQ6ZN01 415 aa7.8□□□□□ -1.16
CDHR3-202ENST00000461766 NEUROD1Q13562 356 aa7.79□□□□□ -1.16
CDHR3-202ENST00000461766 MS4A4AQ96JQ5 239 aa7.79□□□□□ -1.16
CDHR3-202ENST00000461766 TTLL13PA6NNM8 815 aa7.78□□□□□ -1.16
CDHR3-202ENST00000461766 MKRN3Q13064 507 aaKnown RBP7.78□□□□□ -1.16
CDHR3-202ENST00000461766 BMP2KQ9NSY1 1161 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-202ENST00000461766 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-202ENST00000461766 P3H3Q8IVL6 736 aa7.77□□□□□ -1.17
CDHR3-202ENST00000461766 PCDH10Q9P2E7 1040 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms