RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 POTEMA6NI47 508 aa10.23□□□□□ -0.77
CNN3-204ENST00000461018 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
CNN3-204ENST00000461018 SLC39A7Q92504 469 aa10.23□□□□□ -0.77
CNN3-204ENST00000461018 C7P10643 843 aa10.22□□□□□ -0.77
CNN3-204ENST00000461018 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
CNN3-204ENST00000461018 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
CNN3-204ENST00000461018 FKBP8Q14318 412 aa10.21□□□□□ -0.77
CNN3-204ENST00000461018 ATMINO43313 823 aaPredicted RBP10.2□□□□□ -0.78
CNN3-204ENST00000461018 POTEGQ6S5H5 508 aa10.2□□□□□ -0.78
CNN3-204ENST00000461018 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
CNN3-204ENST00000461018 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
CNN3-204ENST00000461018 TSPYL2Q9H2G4 693 aaPredicted RBP10.15□□□□□ -0.78
CNN3-204ENST00000461018 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
CNN3-204ENST00000461018 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
CNN3-204ENST00000461018 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
CNN3-204ENST00000461018 ATN1P54259 1190 aaPredicted RBP10.09□□□□□ -0.79
CNN3-204ENST00000461018 PROM2Q8N271 834 aa10.09□□□□□ -0.79
CNN3-204ENST00000461018 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
CNN3-204ENST00000461018 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
CNN3-204ENST00000461018 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
CNN3-204ENST00000461018 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CNN3-204ENST00000461018 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.8
CNN3-204ENST00000461018 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
CNN3-204ENST00000461018 CECR2Q9BXF3 1484 aa10.02□□□□□ -0.81
CNN3-204ENST00000461018 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
CNN3-204ENST00000461018 TIE1P35590 1138 aa10.01□□□□□ -0.81
CNN3-204ENST00000461018 MIER1Q8N108 512 aa10□□□□□ -0.81
CNN3-204ENST00000461018 MAP3K13O43283 966 aa9.99□□□□□ -0.81
CNN3-204ENST00000461018 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
CNN3-204ENST00000461018 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
CNN3-204ENST00000461018 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
CNN3-204ENST00000461018 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
CNN3-204ENST00000461018 SEC24BO95487 1268 aa9.95□□□□□ -0.82
CNN3-204ENST00000461018 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
CNN3-204ENST00000461018 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
CNN3-204ENST00000461018 NACADO15069 1562 aa9.94□□□□□ -0.82
CNN3-204ENST00000461018 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
CNN3-204ENST00000461018 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
CNN3-204ENST00000461018 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
CNN3-204ENST00000461018 IER5LQ5T953 404 aa9.89□□□□□ -0.83
CNN3-204ENST00000461018 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
CNN3-204ENST00000461018 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
CNN3-204ENST00000461018 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
CNN3-204ENST00000461018 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
CNN3-204ENST00000461018 PCDHB13Q9Y5F0 798 aa9.87□□□□□ -0.83
CNN3-204ENST00000461018 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
CNN3-204ENST00000461018 CDAN1Q8IWY9 1227 aa9.81□□□□□ -0.84
CNN3-204ENST00000461018 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
CNN3-204ENST00000461018 NUBP1P53384 320 aa9.79□□□□□ -0.84
CNN3-204ENST00000461018 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
CNN3-204ENST00000461018 PLCG2P16885 1265 aa9.77□□□□□ -0.85
CNN3-204ENST00000461018 FAM212AQ96EL1 285 aa9.77□□□□□ -0.85
CNN3-204ENST00000461018 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
CNN3-204ENST00000461018 EIF4G1Q04637 1599 aaKnown RBP9.75□□□□□ -0.85
CNN3-204ENST00000461018 ST18O60284 1047 aa9.74□□□□□ -0.85
CNN3-204ENST00000461018 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
CNN3-204ENST00000461018 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
CNN3-204ENST00000461018 IRX5P78411 483 aaPredicted RBP9.7□□□□□ -0.86
CNN3-204ENST00000461018 CUX2O14529 1486 aa9.68□□□□□ -0.86
CNN3-204ENST00000461018 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
CNN3-204ENST00000461018 TMEM121BQ9BXQ6 578 aaPredicted RBP9.67□□□□□ -0.86
CNN3-204ENST00000461018 SNPHO15079 494 aa9.66□□□□□ -0.86
CNN3-204ENST00000461018 DCAF8Q5TAQ9 597 aa9.65□□□□□ -0.86
CNN3-204ENST00000461018 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
CNN3-204ENST00000461018 PYGBP11216 843 aa9.61□□□□□ -0.87
CNN3-204ENST00000461018 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
CNN3-204ENST00000461018 SHROOM4Q9ULL8 1493 aa9.59□□□□□ -0.87
CNN3-204ENST00000461018 MMRN1Q13201 1228 aa9.58□□□□□ -0.88
CNN3-204ENST00000461018 SPNS2Q8IVW8 549 aa9.57□□□□□ -0.88
CNN3-204ENST00000461018 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
CNN3-204ENST00000461018 MYO15BQ96JP2 1530 aa9.56□□□□□ -0.88
CNN3-204ENST00000461018 MARVELD3Q96A59 401 aa9.54□□□□□ -0.88
CNN3-204ENST00000461018 ERCC6Q03468 1493 aa9.53□□□□□ -0.88
CNN3-204ENST00000461018 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CNN3-204ENST00000461018 C3orf67Q6ZVT6 689 aa9.52□□□□□ -0.89
CNN3-204ENST00000461018 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
CNN3-204ENST00000461018 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
CNN3-204ENST00000461018 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.89
CNN3-204ENST00000461018 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
CNN3-204ENST00000461018 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
CNN3-204ENST00000461018 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
CNN3-204ENST00000461018 GSE1Q14687 1217 aa9.49□□□□□ -0.89
CNN3-204ENST00000461018 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
CNN3-204ENST00000461018 EMP3P54852 163 aa9.47□□□□□ -0.89
CNN3-204ENST00000461018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.97e-11■■■□□ 15.6
CNN3-204ENST00000461018 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
CNN3-204ENST00000461018 PSEN1P49768 467 aa9.42□□□□□ -0.9
CNN3-204ENST00000461018 NESP48681 1621 aa9.41□□□□□ -0.9
CNN3-204ENST00000461018 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
CNN3-204ENST00000461018 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
CNN3-204ENST00000461018 G3V3G9 751 aa9.37□□□□□ -0.91
CNN3-204ENST00000461018 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
CNN3-204ENST00000461018 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
CNN3-204ENST00000461018 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
CNN3-204ENST00000461018 POTEB3A0JP26 581 aa9.35□□□□□ -0.91
CNN3-204ENST00000461018 POTEBQ6S5H4 581 aa9.35□□□□□ -0.91
CNN3-204ENST00000461018 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
CNN3-204ENST00000461018 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CNN3-204ENST00000461018 DPY19L2Q6NUT2 758 aa9.31□□□□□ -0.92
CNN3-204ENST00000461018 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms