RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
SHROOM4-203ENST00000460112 TSPY4P0CV99 314 aa11.61□□□□□ -0.55
SHROOM4-203ENST00000460112 TSPY10P0CW01 314 aa11.61□□□□□ -0.55
SHROOM4-203ENST00000460112 CFAP53Q96M91 514 aa11.61□□□□□ -0.55
SHROOM4-203ENST00000460112 FAM9BQ8IZU0 186 aa11.6□□□□□ -0.55
SHROOM4-203ENST00000460112 NACADO15069 1562 aa11.6□□□□□ -0.55
SHROOM4-203ENST00000460112 SCRIBQ14160 1630 aa11.59□□□□□ -0.55
SHROOM4-203ENST00000460112 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
SHROOM4-203ENST00000460112 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
SHROOM4-203ENST00000460112 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
SHROOM4-203ENST00000460112 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
SHROOM4-203ENST00000460112 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
SHROOM4-203ENST00000460112 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
SHROOM4-203ENST00000460112 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
SHROOM4-203ENST00000460112 ARID4BQ4LE39 1312 aaPredicted RBP11.57□□□□□ -0.56
SHROOM4-203ENST00000460112 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
SHROOM4-203ENST00000460112 MTUS2Q5JR59 1369 aa11.55□□□□□ -0.56
SHROOM4-203ENST00000460112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHROOM4-203ENST00000460112 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
SHROOM4-203ENST00000460112 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
SHROOM4-203ENST00000460112 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
SHROOM4-203ENST00000460112 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.56
SHROOM4-203ENST00000460112 ARXQ96QS3 562 aa11.52□□□□□ -0.56
SHROOM4-203ENST00000460112 GOLGA3Q08378 1498 aa11.52□□□□□ -0.56
SHROOM4-203ENST00000460112 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.57
SHROOM4-203ENST00000460112 MS4A1P11836 297 aa11.51□□□□□ -0.57
SHROOM4-203ENST00000460112 PPM1GO15355 546 aaPredicted RBP11.51□□□□□ -0.57
SHROOM4-203ENST00000460112 NPHP1O15259 732 aa11.51□□□□□ -0.57
SHROOM4-203ENST00000460112 NAP1L5Q96NT1 182 aaPredicted RBP11.51□□□□□ -0.57
SHROOM4-203ENST00000460112 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
SHROOM4-203ENST00000460112 PNNQ9H307 717 aaKnown RBP11.5□□□□□ -0.57
SHROOM4-203ENST00000460112 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
SHROOM4-203ENST00000460112 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
SHROOM4-203ENST00000460112 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
SHROOM4-203ENST00000460112 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
SHROOM4-203ENST00000460112 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
SHROOM4-203ENST00000460112 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.57
SHROOM4-203ENST00000460112 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.58
SHROOM4-203ENST00000460112 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.58
SHROOM4-203ENST00000460112 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
SHROOM4-203ENST00000460112 CLIP1P30622 1438 aa11.45□□□□□ -0.58
SHROOM4-203ENST00000460112 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
SHROOM4-203ENST00000460112 PTMSP20962 102 aa11.44□□□□□ -0.58
SHROOM4-203ENST00000460112 KIAA2012Q0VF49 1180 aa11.44□□□□□ -0.58
SHROOM4-203ENST00000460112 FGD1P98174 961 aa11.44□□□□□ -0.58
SHROOM4-203ENST00000460112 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
SHROOM4-203ENST00000460112 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
SHROOM4-203ENST00000460112 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
SHROOM4-203ENST00000460112 MCCP23508 829 aa11.41□□□□□ -0.58
SHROOM4-203ENST00000460112 OS9Q13438 667 aaPredicted RBP11.41□□□□□ -0.58
SHROOM4-203ENST00000460112 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
SHROOM4-203ENST00000460112 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
SHROOM4-203ENST00000460112 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
SHROOM4-203ENST00000460112 CLSTN1O94985 981 aa11.4□□□□□ -0.58
SHROOM4-203ENST00000460112 GOLGA6L4A6NEF3 574 aa11.39□□□□□ -0.59
SHROOM4-203ENST00000460112 KCNJ4P48050 445 aa11.38□□□□□ -0.59
SHROOM4-203ENST00000460112 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
SHROOM4-203ENST00000460112 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
SHROOM4-203ENST00000460112 KANK1Q14678 1352 aa11.37□□□□□ -0.59
SHROOM4-203ENST00000460112 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
SHROOM4-203ENST00000460112 HSP90AB1P08238 724 aaKnown RBP11.36□□□□□ -0.59
SHROOM4-203ENST00000460112 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
SHROOM4-203ENST00000460112 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
SHROOM4-203ENST00000460112 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
SHROOM4-203ENST00000460112 HTATSF1O43719 755 aaKnown RBP11.33□□□□□ -0.6
SHROOM4-203ENST00000460112 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
SHROOM4-203ENST00000460112 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
SHROOM4-203ENST00000460112 POGKQ9P215 609 aa11.33□□□□□ -0.6
SHROOM4-203ENST00000460112 CCDC34Q96HJ3 373 aa11.33□□□□□ -0.6
SHROOM4-203ENST00000460112 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
SHROOM4-203ENST00000460112 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
SHROOM4-203ENST00000460112 NOC3LQ8WTT2 800 aaKnown RBP11.32□□□□□ -0.6
SHROOM4-203ENST00000460112 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
SHROOM4-203ENST00000460112 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
SHROOM4-203ENST00000460112 NAP1L2Q9ULW6 460 aaPredicted RBP11.3□□□□□ -0.6
SHROOM4-203ENST00000460112 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
SHROOM4-203ENST00000460112 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
SHROOM4-203ENST00000460112 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
SHROOM4-203ENST00000460112 DRC7Q8IY82 874 aa11.29□□□□□ -0.6
SHROOM4-203ENST00000460112 TPM4P67936 248 aa11.28□□□□□ -0.6
SHROOM4-203ENST00000460112 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
SHROOM4-203ENST00000460112 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
SHROOM4-203ENST00000460112 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
SHROOM4-203ENST00000460112 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
SHROOM4-203ENST00000460112 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
SHROOM4-203ENST00000460112 CARD11Q9BXL7 1154 aa11.27□□□□□ -0.61
SHROOM4-203ENST00000460112 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
SHROOM4-203ENST00000460112 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
SHROOM4-203ENST00000460112 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
SHROOM4-203ENST00000460112 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
SHROOM4-203ENST00000460112 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
SHROOM4-203ENST00000460112 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
SHROOM4-203ENST00000460112 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
SHROOM4-203ENST00000460112 ERCC6Q03468 1493 aa11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
SHROOM4-203ENST00000460112 RRP7BPQ9NSQ0 103 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms