RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 DIP2BQ9P265 1576 aa28.42■■■□□ 2.14
NELFE-207ENST00000454913 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
NELFE-207ENST00000454913 KDM4FA0A1W2PPD8 638 aa28.41■■■□□ 2.14
NELFE-207ENST00000454913 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
NELFE-207ENST00000454913 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
NELFE-207ENST00000454913 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
NELFE-207ENST00000454913 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
NELFE-207ENST00000454913 TSPOAP1O95153 1857 aa28.37■■■□□ 2.13
NELFE-207ENST00000454913 RUSC2Q8N2Y8 1516 aa28.33■■■□□ 2.13
NELFE-207ENST00000454913 ADCY10Q96PN6 1610 aa28.32■■■□□ 2.12
NELFE-207ENST00000454913 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
NELFE-207ENST00000454913 ADGRL1O94910 1474 aa28.06■■■□□ 2.08
NELFE-207ENST00000454913 KIAA0586Q9BVV6 1533 aa28.05■■■□□ 2.08
NELFE-207ENST00000454913 TTBK1Q5TCY1 1321 aaPredicted RBP28.03■■■□□ 2.08
NELFE-207ENST00000454913 PPRC1Q5VV67 1664 aaKnown RBP27.97■■■□□ 2.07
NELFE-207ENST00000454913 PTPRGP23470 1445 aa27.97■■■□□ 2.07
NELFE-207ENST00000454913 HECW2Q9P2P5 1572 aa27.94■■■□□ 2.06
NELFE-207ENST00000454913 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
NELFE-207ENST00000454913 ASXL2Q76L83 1435 aa27.92■■■□□ 2.06
NELFE-207ENST00000454913 CUL7Q14999 1698 aa27.91■■■□□ 2.06
NELFE-207ENST00000454913 GLI2P10070 1586 aa27.91■■■□□ 2.06
NELFE-207ENST00000454913 PLB1Q6P1J6 1458 aa27.9■■■□□ 2.06
NELFE-207ENST00000454913 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
NELFE-207ENST00000454913 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
NELFE-207ENST00000454913 IGF1RP08069 1367 aa27.83■■■□□ 2.05
NELFE-207ENST00000454913 KIF27Q86VH2 1401 aa27.8■■■□□ 2.04
NELFE-207ENST00000454913 COL17A1Q9UMD9 1497 aaPredicted RBP27.79■■■□□ 2.04
NELFE-207ENST00000454913 MAP3K4Q9Y6R4 1608 aa27.78■■■□□ 2.04
NELFE-207ENST00000454913 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.03
NELFE-207ENST00000454913 UHRF1BP1LA0JNW5 1464 aa27.75■■■□□ 2.03
NELFE-207ENST00000454913 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
NELFE-207ENST00000454913 UACAQ9BZF9 1416 aa27.72■■■□□ 2.03
NELFE-207ENST00000454913 IQGAP2Q13576 1575 aa27.72■■■□□ 2.03
NELFE-207ENST00000454913 CARMIL1Q5VZK9 1371 aa27.68■■■□□ 2.02
NELFE-207ENST00000454913 ZCCHC11Q5TAX3 1644 aaKnown RBP27.66■■■□□ 2.02
NELFE-207ENST00000454913 KDM5BQ9UGL1 1544 aa27.64■■■□□ 2.02
NELFE-207ENST00000454913 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
NELFE-207ENST00000454913 FBXO41Q8TF61 875 aa27.56■■■□□ 2
NELFE-207ENST00000454913 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
NELFE-207ENST00000454913 KIF21BO75037 1637 aa27.49■■□□□ 1.99
NELFE-207ENST00000454913 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
NELFE-207ENST00000454913 UGGT2Q9NYU1 1516 aa27.46■■□□□ 1.99
NELFE-207ENST00000454913 CFAP43Q8NDM7 1665 aa27.46■■□□□ 1.99
NELFE-207ENST00000454913 CD109Q6YHK3 1445 aa27.44■■□□□ 1.98
NELFE-207ENST00000454913 MAGI3Q5TCQ9 1506 aa27.41■■□□□ 1.98
NELFE-207ENST00000454913 KCNH8Q96L42 1107 aa27.39■■□□□ 1.98
NELFE-207ENST00000454913 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
NELFE-207ENST00000454913 PTPRMP28827 1452 aa27.26■■□□□ 1.95
NELFE-207ENST00000454913 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
NELFE-207ENST00000454913 ADAMTSL3P82987 1691 aa27.24■■□□□ 1.95
NELFE-207ENST00000454913 ABCA8O94911 1581 aa27.24■■□□□ 1.95
NELFE-207ENST00000454913 ARAP3Q8WWN8 1544 aa27.22■■□□□ 1.95
NELFE-207ENST00000454913 GOLGA3Q08378 1498 aa27.2■■□□□ 1.95
NELFE-207ENST00000454913 PCF11O94913 1555 aaKnown RBP27.17■■□□□ 1.94
NELFE-207ENST00000454913 BCORL1Q5H9F3 1711 aa27.13■■□□□ 1.93
NELFE-207ENST00000454913 MADDQ8WXG6 1647 aa27.12■■□□□ 1.93
NELFE-207ENST00000454913 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
NELFE-207ENST00000454913 ARID4BQ4LE39 1312 aaPredicted RBP27.12■■□□□ 1.93
NELFE-207ENST00000454913 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
NELFE-207ENST00000454913 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
NELFE-207ENST00000454913 PHLDB1Q86UU1 1377 aa27.07■■□□□ 1.92
NELFE-207ENST00000454913 ABCA9Q8IUA7 1624 aa27.06■■□□□ 1.92
NELFE-207ENST00000454913 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
NELFE-207ENST00000454913 RIMS1Q86UR5 1692 aaKnown RBP27.04■■□□□ 1.92
NELFE-207ENST00000454913 ATP10BO94823 1461 aa27■■□□□ 1.91
NELFE-207ENST00000454913 NEO1Q92859 1461 aa26.99■■□□□ 1.91
NELFE-207ENST00000454913 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
NELFE-207ENST00000454913 PLPPR3Q6T4P5 718 aa26.97■■□□□ 1.91
NELFE-207ENST00000454913 HSPA2P54652 639 aa26.96■■□□□ 1.91
NELFE-207ENST00000454913 P3H3Q8IVL6 736 aa26.94■■□□□ 1.9
NELFE-207ENST00000454913 ARHGEF40Q8TER5 1519 aa26.91■■□□□ 1.9
NELFE-207ENST00000454913 CERKQ8TCT0 537 aa26.91■■□□□ 1.9
NELFE-207ENST00000454913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.9■■□□□ 1.9
NELFE-207ENST00000454913 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
NELFE-207ENST00000454913 RAPGEF6Q8TEU7 1601 aa26.85■■□□□ 1.89
NELFE-207ENST00000454913 RICTORQ6R327 1708 aa26.84■■□□□ 1.89
NELFE-207ENST00000454913 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
NELFE-207ENST00000454913 POGZQ7Z3K3 1410 aa26.82■■□□□ 1.88
NELFE-207ENST00000454913 DENND4BO75064 1496 aaPredicted RBP26.82■■□□□ 1.88
NELFE-207ENST00000454913 FANCAO15360 1455 aa26.81■■□□□ 1.88
NELFE-207ENST00000454913 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
NELFE-207ENST00000454913 ILDR2Q71H61 639 aa26.78■■□□□ 1.88
NELFE-207ENST00000454913 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
NELFE-207ENST00000454913 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.88
NELFE-207ENST00000454913 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.87
NELFE-207ENST00000454913 SOCS7O14512 581 aa26.76■■□□□ 1.87
NELFE-207ENST00000454913 MLECQ14165 292 aa26.74■■□□□ 1.87
NELFE-207ENST00000454913 SIGLEC1Q9BZZ2 1709 aa26.73■■□□□ 1.87
NELFE-207ENST00000454913 SAMD9Q5K651 1589 aa26.73■■□□□ 1.87
NELFE-207ENST00000454913 ZFYVE16Q7Z3T8 1539 aa26.73■■□□□ 1.87
NELFE-207ENST00000454913 FHOD3Q2V2M9 1422 aa26.72■■□□□ 1.87
NELFE-207ENST00000454913 EFCAB5A4FU69 1503 aa26.71■■□□□ 1.87
NELFE-207ENST00000454913 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.86
NELFE-207ENST00000454913 NUP153P49790 1475 aaKnown RBP26.68■■□□□ 1.86
NELFE-207ENST00000454913 TTC37Q6PGP7 1564 aa26.68■■□□□ 1.86
NELFE-207ENST00000454913 YEATS2Q9ULM3 1422 aa26.68■■□□□ 1.86
NELFE-207ENST00000454913 PREX1Q8TCU6 1659 aa26.66■■□□□ 1.86
NELFE-207ENST00000454913 PLEKHD1A6NEE1 506 aa26.65■■□□□ 1.86
NELFE-207ENST00000454913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.62■■□□□ 1.853e-7■□□□□ 8.5
NELFE-207ENST00000454913 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms