RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 WDR43Q15061 677 aaKnown RBP eCLIP8.85□□□□□ -0.99
HCG18-239ENST00000454129 MROH2BQ7Z745 1585 aa8.85□□□□□ -0.99
HCG18-239ENST00000454129 SENP3Q9H4L4 574 aaPredicted RBP8.85□□□□□ -0.99
HCG18-239ENST00000454129 HSP90AA1P07900 732 aaKnown RBP8.84□□□□□ -0.99
HCG18-239ENST00000454129 EIF4G1Q04637 1599 aaKnown RBP8.84□□□□□ -1
HCG18-239ENST00000454129 RGL3Q3MIN7 710 aa8.83□□□□□ -1
HCG18-239ENST00000454129 UPF2Q9HAU5 1272 aaKnown RBP8.83□□□□□ -1
HCG18-239ENST00000454129 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.82□□□□□ -1
HCG18-239ENST00000454129 CEP162Q5TB80 1403 aa8.82□□□□□ -1
HCG18-239ENST00000454129 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
HCG18-239ENST00000454129 WRNQ14191 1432 aaPredicted RBP eCLIP8.81□□□□□ -1
HCG18-239ENST00000454129 EEA1Q15075 1411 aa8.81□□□□□ -1
HCG18-239ENST00000454129 CFDP1Q9UEE9 299 aaPredicted RBP8.8□□□□□ -1
HCG18-239ENST00000454129 GOLGA3Q08378 1498 aa8.79□□□□□ -1
HCG18-239ENST00000454129 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
HCG18-239ENST00000454129 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
HCG18-239ENST00000454129 KIF27Q86VH2 1401 aa8.77□□□□□ -1.01
HCG18-239ENST00000454129 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
HCG18-239ENST00000454129 BAZ1BQ9UIG0 1483 aaKnown RBP8.76□□□□□ -1.01
HCG18-239ENST00000454129 UNC13AQ9UPW8 1703 aa8.76□□□□□ -1.01
HCG18-239ENST00000454129 ANP32EQ9BTT0 268 aa8.75□□□□□ -1.01
HCG18-239ENST00000454129 TNIKQ9UKE5 1360 aa8.75□□□□□ -1.01
HCG18-239ENST00000454129 ANP32BQ92688 251 aaKnown RBP8.75□□□□□ -1.01
HCG18-239ENST00000454129 TSHZ2Q9NRE2 1034 aa8.74□□□□□ -1.01
HCG18-239ENST00000454129 SIN3AQ96ST3 1273 aa8.74□□□□□ -1.01
HCG18-239ENST00000454129 BICRAQ9NZM4 1560 aa8.74□□□□□ -1.01
HCG18-239ENST00000454129 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
HCG18-239ENST00000454129 WIZO95785 1651 aa8.73□□□□□ -1.01
HCG18-239ENST00000454129 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
HCG18-239ENST00000454129 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
HCG18-239ENST00000454129 A0A0G2JS52 829 aa8.72□□□□□ -1.01
HCG18-239ENST00000454129 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
HCG18-239ENST00000454129 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
HCG18-239ENST00000454129 NBR1Q14596 966 aa8.72□□□□□ -1.01
HCG18-239ENST00000454129 CEP164Q9UPV0 1460 aa8.71□□□□□ -1.02
HCG18-239ENST00000454129 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
HCG18-239ENST00000454129 ARID4BQ4LE39 1312 aaPredicted RBP8.7□□□□□ -1.02
HCG18-239ENST00000454129 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
HCG18-239ENST00000454129 CDCA8Q53HL2 280 aa8.7□□□□□ -1.02
HCG18-239ENST00000454129 MYH16Q9H6N6 1097 aa8.7□□□□□ -1.02
HCG18-239ENST00000454129 EIF5BO60841 1220 aaKnown RBP8.68□□□□□ -1.02
HCG18-239ENST00000454129 CFAP53Q96M91 514 aa8.68□□□□□ -1.02
HCG18-239ENST00000454129 ARXQ96QS3 562 aa8.68□□□□□ -1.02
HCG18-239ENST00000454129 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
HCG18-239ENST00000454129 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
HCG18-239ENST00000454129 CARMIL1Q5VZK9 1371 aa8.65□□□□□ -1.02
HCG18-239ENST00000454129 SOGA1O94964 1423 aa8.64□□□□□ -1.03
HCG18-239ENST00000454129 POGKQ9P215 609 aa8.64□□□□□ -1.03
HCG18-239ENST00000454129 TNNT2P45379 298 aaPredicted RBP8.64□□□□□ -1.03
HCG18-239ENST00000454129 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
HCG18-239ENST00000454129 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
HCG18-239ENST00000454129 CCDC88BA6NC98 1476 aa8.64□□□□□ -1.03
HCG18-239ENST00000454129 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
HCG18-239ENST00000454129 DCAF11Q8TEB1 546 aa8.63□□□□□ -1.03
HCG18-239ENST00000454129 ERCC6Q03468 1493 aa8.63□□□□□ -1.03
HCG18-239ENST00000454129 CUX2O14529 1486 aa8.62□□□□□ -1.03
HCG18-239ENST00000454129 HAP1P54257 671 aaPredicted RBP8.62□□□□□ -1.03
HCG18-239ENST00000454129 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
HCG18-239ENST00000454129 FHAD1B1AJZ9 1412 aa8.61□□□□□ -1.03
HCG18-239ENST00000454129 CC2D1BQ5T0F9 858 aaKnown RBP8.61□□□□□ -1.03
HCG18-239ENST00000454129 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
HCG18-239ENST00000454129 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
HCG18-239ENST00000454129 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
HCG18-239ENST00000454129 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
HCG18-239ENST00000454129 FTSJ3Q8IY81 847 aaKnown RBP8.6□□□□□ -1.03
HCG18-239ENST00000454129 BECN1Q14457 450 aa8.6□□□□□ -1.03
HCG18-239ENST00000454129 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
HCG18-239ENST00000454129 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
HCG18-239ENST00000454129 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
HCG18-239ENST00000454129 NESP48681 1621 aa8.58□□□□□ -1.04
HCG18-239ENST00000454129 MLECQ14165 292 aa8.58□□□□□ -1.04
HCG18-239ENST00000454129 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
HCG18-239ENST00000454129 TMF1P82094 1093 aa8.57□□□□□ -1.04
HCG18-239ENST00000454129 RGS3P49796 1198 aa8.57□□□□□ -1.04
HCG18-239ENST00000454129 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
HCG18-239ENST00000454129 SMARCA2P51531 1590 aa8.57□□□□□ -1.04
HCG18-239ENST00000454129 FOXD1Q16676 465 aa8.56□□□□□ -1.04
HCG18-239ENST00000454129 GGT6Q6P531 493 aa8.56□□□□□ -1.04
HCG18-239ENST00000454129 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
HCG18-239ENST00000454129 PKD2Q13563 968 aa8.56□□□□□ -1.04
HCG18-239ENST00000454129 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
HCG18-239ENST00000454129 SAFB2Q14151 953 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■□□ 15.2
HCG18-239ENST00000454129 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
HCG18-239ENST00000454129 B4GALNT3Q6L9W6 998 aa8.54□□□□□ -1.04
HCG18-239ENST00000454129 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
HCG18-239ENST00000454129 SOX12O15370 315 aa8.54□□□□□ -1.04
HCG18-239ENST00000454129 NCLP19338 710 aaKnown RBP8.54□□□□□ -1.04
HCG18-239ENST00000454129 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
HCG18-239ENST00000454129 ABCC8Q09428 1581 aa8.54□□□□□ -1.04
HCG18-239ENST00000454129 HSPA5P11021 654 aaKnown RBP8.53□□□□□ -1.04
HCG18-239ENST00000454129 GOLGA6L22H0YM25 854 aa8.53□□□□□ -1.04
HCG18-239ENST00000454129 SETD5Q9C0A6 1442 aa8.53□□□□□ -1.04
HCG18-239ENST00000454129 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
HCG18-239ENST00000454129 MSH5O43196 834 aa8.53□□□□□ -1.04
HCG18-239ENST00000454129 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
HCG18-239ENST00000454129 KANK1Q14678 1352 aa8.53□□□□□ -1.04
HCG18-239ENST00000454129 CADPSQ9ULU8 1353 aa8.53□□□□□ -1.04
HCG18-239ENST00000454129 MORC1Q86VD1 984 aa8.51□□□□□ -1.05
HCG18-239ENST00000454129 STK26Q9P289 416 aa8.51□□□□□ -1.05
HCG18-239ENST00000454129 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms