RNA–Protein interactions for RNA: ENST00000450892.6

STRC-205, Transcript of stereocilin, humanhuman

APPRIS P2 TSL 5 BASIC

Gene STRC, Length 5,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-205ENST00000450892 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
STRC-205ENST00000450892 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
STRC-205ENST00000450892 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
STRC-205ENST00000450892 TRIM44Q96DX7 344 aaPredicted RBP18.42■□□□□ 0.54
STRC-205ENST00000450892 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
STRC-205ENST00000450892 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
STRC-205ENST00000450892 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
STRC-205ENST00000450892 NCLP19338 710 aaKnown RBP18.4■□□□□ 0.54
STRC-205ENST00000450892 PPP4R2Q9NY27 417 aa18.39■□□□□ 0.53
STRC-205ENST00000450892 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
STRC-205ENST00000450892 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
STRC-205ENST00000450892 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
STRC-205ENST00000450892 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
STRC-205ENST00000450892 TIMELESSQ9UNS1 1208 aa18.32■□□□□ 0.52
STRC-205ENST00000450892 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
STRC-205ENST00000450892 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
STRC-205ENST00000450892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
STRC-205ENST00000450892 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
STRC-205ENST00000450892 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
STRC-205ENST00000450892 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
STRC-205ENST00000450892 NOP58Q9Y2X3 529 aaKnown RBP18.28■□□□□ 0.52
STRC-205ENST00000450892 CASC1Q6TDU7 716 aa18.27■□□□□ 0.52
STRC-205ENST00000450892 ARXQ96QS3 562 aa18.27■□□□□ 0.52
STRC-205ENST00000450892 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
STRC-205ENST00000450892 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
STRC-205ENST00000450892 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
STRC-205ENST00000450892 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
STRC-205ENST00000450892 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
STRC-205ENST00000450892 MS4A1P11836 297 aa18.22■□□□□ 0.51
STRC-205ENST00000450892 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
STRC-205ENST00000450892 KNSTRNQ9Y448 316 aa18.21■□□□□ 0.51
STRC-205ENST00000450892 NACADO15069 1562 aa18.19■□□□□ 0.5
STRC-205ENST00000450892 PTMAP06454 111 aaKnown RBP18.16■□□□□ 0.5
STRC-205ENST00000450892 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
STRC-205ENST00000450892 CDK11BP21127 795 aaKnown RBP18.16■□□□□ 0.5
STRC-205ENST00000450892 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.5
STRC-205ENST00000450892 CARD11Q9BXL7 1154 aa18.14■□□□□ 0.5
STRC-205ENST00000450892 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
STRC-205ENST00000450892 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
STRC-205ENST00000450892 L1TD1Q5T7N2 865 aaKnown RBP18.12■□□□□ 0.49
STRC-205ENST00000450892 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
STRC-205ENST00000450892 ZRSR1Q15695 479 aaKnown RBP18.11■□□□□ 0.49
STRC-205ENST00000450892 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
STRC-205ENST00000450892 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
STRC-205ENST00000450892 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
STRC-205ENST00000450892 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
STRC-205ENST00000450892 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
STRC-205ENST00000450892 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
STRC-205ENST00000450892 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
STRC-205ENST00000450892 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
STRC-205ENST00000450892 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
STRC-205ENST00000450892 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
STRC-205ENST00000450892 PTMSP20962 102 aa18.05■□□□□ 0.48
STRC-205ENST00000450892 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
STRC-205ENST00000450892 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
STRC-205ENST00000450892 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.47
STRC-205ENST00000450892 HSCBQ8IWL3 235 aa17.99■□□□□ 0.47
STRC-205ENST00000450892 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
STRC-205ENST00000450892 NRDCO43847 1150 aa17.98■□□□□ 0.47
STRC-205ENST00000450892 TMF1P82094 1093 aa17.98■□□□□ 0.47
STRC-205ENST00000450892 RBM19Q9Y4C8 960 aaKnown RBP17.98■□□□□ 0.47
STRC-205ENST00000450892 PPP1R15AO75807 674 aaPredicted RBP17.97■□□□□ 0.47
STRC-205ENST00000450892 SIN3AQ96ST3 1273 aa17.97■□□□□ 0.47
STRC-205ENST00000450892 DEKP35659 375 aaKnown RBP17.97■□□□□ 0.47
STRC-205ENST00000450892 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
STRC-205ENST00000450892 RGS3P49796 1198 aa17.96■□□□□ 0.47
STRC-205ENST00000450892 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
STRC-205ENST00000450892 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
STRC-205ENST00000450892 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
STRC-205ENST00000450892 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
STRC-205ENST00000450892 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
STRC-205ENST00000450892 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
STRC-205ENST00000450892 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
STRC-205ENST00000450892 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
STRC-205ENST00000450892 MCCP23508 829 aa17.89■□□□□ 0.46
STRC-205ENST00000450892 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
STRC-205ENST00000450892 RALBP1Q15311 655 aa17.87■□□□□ 0.45
STRC-205ENST00000450892 KANK1Q14678 1352 aa17.86■□□□□ 0.45
STRC-205ENST00000450892 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
STRC-205ENST00000450892 HSPA5P11021 654 aaKnown RBP17.85■□□□□ 0.45
STRC-205ENST00000450892 GBP4Q96PP9 640 aa17.84■□□□□ 0.45
STRC-205ENST00000450892 RTN4Q9NQC3 1192 aaKnown RBP17.84■□□□□ 0.45
STRC-205ENST00000450892 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
STRC-205ENST00000450892 NEUROD2Q15784 382 aa17.83■□□□□ 0.44
STRC-205ENST00000450892 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
STRC-205ENST00000450892 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
STRC-205ENST00000450892 POGKQ9P215 609 aa17.8■□□□□ 0.44
STRC-205ENST00000450892 GOLGA6L4A6NEF3 574 aa17.79■□□□□ 0.44
STRC-205ENST00000450892 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
STRC-205ENST00000450892 SOGA1O94964 1423 aa17.79■□□□□ 0.44
STRC-205ENST00000450892 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
STRC-205ENST00000450892 DCAF11Q8TEB1 546 aa17.77■□□□□ 0.44
STRC-205ENST00000450892 PLCB2Q00722 1185 aa17.77■□□□□ 0.44
STRC-205ENST00000450892 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
STRC-205ENST00000450892 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
STRC-205ENST00000450892 CALD1Q05682 793 aaKnown RBP17.76■□□□□ 0.43
STRC-205ENST00000450892 CUX2O14529 1486 aa17.76■□□□□ 0.43
STRC-205ENST00000450892 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
STRC-205ENST00000450892 IPO9Q96P70 1041 aaKnown RBP17.76■□□□□ 0.43
STRC-205ENST00000450892 OS9Q13438 667 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms