RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 FAM69CQ0P6D2 419 aa24.73■■□□□ 1.55
CPSF7-207ENST00000449811 ABCC10Q5T3U5 1492 aa24.71■■□□□ 1.55
CPSF7-207ENST00000449811 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.54
CPSF7-207ENST00000449811 MAPKBP1O60336 1514 aa24.66■■□□□ 1.54
CPSF7-207ENST00000449811 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
CPSF7-207ENST00000449811 DIP2BQ9P265 1576 aa24.63■■□□□ 1.53
CPSF7-207ENST00000449811 ADCY10Q96PN6 1610 aa24.59■■□□□ 1.53
CPSF7-207ENST00000449811 KDM6BO15054 1643 aa24.56■■□□□ 1.52
CPSF7-207ENST00000449811 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
CPSF7-207ENST00000449811 KIAA0586Q9BVV6 1533 aa24.49■■□□□ 1.51
CPSF7-207ENST00000449811 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
CPSF7-207ENST00000449811 IGF1RP08069 1367 aa24.4■■□□□ 1.5
CPSF7-207ENST00000449811 PTPRGP23470 1445 aa24.38■■□□□ 1.49
CPSF7-207ENST00000449811 CUL7Q14999 1698 aa24.36■■□□□ 1.49
CPSF7-207ENST00000449811 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
CPSF7-207ENST00000449811 ILDR1Q86SU0 546 aaPredicted RBP24.33■■□□□ 1.49
CPSF7-207ENST00000449811 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.48
CPSF7-207ENST00000449811 ABCC2Q92887 1545 aa24.31■■□□□ 1.48
CPSF7-207ENST00000449811 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
CPSF7-207ENST00000449811 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
CPSF7-207ENST00000449811 ASXL2Q76L83 1435 aa24.27■■□□□ 1.48
CPSF7-207ENST00000449811 PLB1Q6P1J6 1458 aa24.26■■□□□ 1.47
CPSF7-207ENST00000449811 GLI2P10070 1586 aa24.25■■□□□ 1.47
CPSF7-207ENST00000449811 PPRC1Q5VV67 1664 aaKnown RBP24.24■■□□□ 1.47
CPSF7-207ENST00000449811 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
CPSF7-207ENST00000449811 ADGRL1O94910 1474 aa24.23■■□□□ 1.47
CPSF7-207ENST00000449811 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
CPSF7-207ENST00000449811 IQGAP2Q13576 1575 aa24.18■■□□□ 1.46
CPSF7-207ENST00000449811 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
CPSF7-207ENST00000449811 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.46
CPSF7-207ENST00000449811 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
CPSF7-207ENST00000449811 DISP1Q96F81 1524 aa24.1■■□□□ 1.45
CPSF7-207ENST00000449811 TEX14Q8IWB6 1497 aa24.1■■□□□ 1.45
CPSF7-207ENST00000449811 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
CPSF7-207ENST00000449811 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
CPSF7-207ENST00000449811 HECW2Q9P2P5 1572 aa24.06■■□□□ 1.44
CPSF7-207ENST00000449811 ZCCHC11Q5TAX3 1644 aaKnown RBP24.02■■□□□ 1.44
CPSF7-207ENST00000449811 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
CPSF7-207ENST00000449811 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
CPSF7-207ENST00000449811 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
CPSF7-207ENST00000449811 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
CPSF7-207ENST00000449811 CD109Q6YHK3 1445 aa23.87■■□□□ 1.41
CPSF7-207ENST00000449811 MAGI3Q5TCQ9 1506 aa23.87■■□□□ 1.41
CPSF7-207ENST00000449811 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
CPSF7-207ENST00000449811 KCNH8Q96L42 1107 aa23.83■■□□□ 1.41
CPSF7-207ENST00000449811 GOLGA3Q08378 1498 aa23.77■■□□□ 1.4
CPSF7-207ENST00000449811 ABCA8O94911 1581 aa23.77■■□□□ 1.4
CPSF7-207ENST00000449811 KIF21BO75037 1637 aa23.76■■□□□ 1.39
CPSF7-207ENST00000449811 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
CPSF7-207ENST00000449811 FBXO41Q8TF61 875 aa23.7■■□□□ 1.38
CPSF7-207ENST00000449811 ARAP3Q8WWN8 1544 aa23.69■■□□□ 1.38
CPSF7-207ENST00000449811 PTPRMP28827 1452 aa23.62■■□□□ 1.37
CPSF7-207ENST00000449811 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
CPSF7-207ENST00000449811 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
CPSF7-207ENST00000449811 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
CPSF7-207ENST00000449811 ADAMTSL3P82987 1691 aa23.59■■□□□ 1.37
CPSF7-207ENST00000449811 ATP10BO94823 1461 aa23.58■■□□□ 1.37
CPSF7-207ENST00000449811 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
CPSF7-207ENST00000449811 ABCA9Q8IUA7 1624 aa23.56■■□□□ 1.36
CPSF7-207ENST00000449811 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
CPSF7-207ENST00000449811 P3H3Q8IVL6 736 aa23.53■■□□□ 1.36
CPSF7-207ENST00000449811 NEO1Q92859 1461 aa23.51■■□□□ 1.35
CPSF7-207ENST00000449811 PCF11O94913 1555 aaKnown RBP23.49■■□□□ 1.35
CPSF7-207ENST00000449811 BCORL1Q5H9F3 1711 aa23.49■■□□□ 1.35
CPSF7-207ENST00000449811 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
CPSF7-207ENST00000449811 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
CPSF7-207ENST00000449811 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
CPSF7-207ENST00000449811 LMTK3Q96Q04 1460 aa23.45■■□□□ 1.34
CPSF7-207ENST00000449811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
CPSF7-207ENST00000449811 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
CPSF7-207ENST00000449811 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
CPSF7-207ENST00000449811 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
CPSF7-207ENST00000449811 ARHGEF40Q8TER5 1519 aa23.38■■□□□ 1.33
CPSF7-207ENST00000449811 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
CPSF7-207ENST00000449811 DENND4BO75064 1496 aaPredicted RBP23.35■■□□□ 1.33
CPSF7-207ENST00000449811 NUP153P49790 1475 aaKnown RBP23.35■■□□□ 1.33
CPSF7-207ENST00000449811 HSPA2P54652 639 aa23.32■■□□□ 1.32
CPSF7-207ENST00000449811 RICTORQ6R327 1708 aa23.3■■□□□ 1.32
CPSF7-207ENST00000449811 FHOD3Q2V2M9 1422 aa23.3■■□□□ 1.32
CPSF7-207ENST00000449811 POGZQ7Z3K3 1410 aa23.3■■□□□ 1.32
CPSF7-207ENST00000449811 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
CPSF7-207ENST00000449811 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
CPSF7-207ENST00000449811 FANCAO15360 1455 aa23.29■■□□□ 1.32
CPSF7-207ENST00000449811 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
CPSF7-207ENST00000449811 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
CPSF7-207ENST00000449811 CFAP74Q9C0B2 1584 aa23.26■■□□□ 1.31
CPSF7-207ENST00000449811 ZMYM4Q5VZL5 1548 aa23.24■■□□□ 1.31
CPSF7-207ENST00000449811 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
CPSF7-207ENST00000449811 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
CPSF7-207ENST00000449811 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
CPSF7-207ENST00000449811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.23■■□□□ 1.31
CPSF7-207ENST00000449811 CERKQ8TCT0 537 aa23.22■■□□□ 1.31
CPSF7-207ENST00000449811 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
CPSF7-207ENST00000449811 SIGLEC1Q9BZZ2 1709 aa23.2■■□□□ 1.3
CPSF7-207ENST00000449811 MAGI2Q86UL8 1455 aa23.19■■□□□ 1.3
CPSF7-207ENST00000449811 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
CPSF7-207ENST00000449811 MLECQ14165 292 aa23.18■■□□□ 1.3
CPSF7-207ENST00000449811 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
CPSF7-207ENST00000449811 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.29
CPSF7-207ENST00000449811 SCAPERQ9BY12 1400 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms