RNA–Protein interactions for RNA: ENST00000448152.2

GAPDHP16-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 16, humanhuman

BASIC

Gene GAPDHP16, Length 962 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP16-201ENST00000448152 EVX2Q03828 476 aa12.93□□□□□ -0.34
GAPDHP16-201ENST00000448152 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
GAPDHP16-201ENST00000448152 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
GAPDHP16-201ENST00000448152 MIER1Q8N108 512 aa12.88□□□□□ -0.35
GAPDHP16-201ENST00000448152 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
GAPDHP16-201ENST00000448152 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
GAPDHP16-201ENST00000448152 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
GAPDHP16-201ENST00000448152 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
GAPDHP16-201ENST00000448152 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
GAPDHP16-201ENST00000448152 CLCN6P51797 869 aa12.76□□□□□ -0.37
GAPDHP16-201ENST00000448152 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
GAPDHP16-201ENST00000448152 NCAPD3P42695 1498 aa12.71□□□□□ -0.38
GAPDHP16-201ENST00000448152 THOC2Q8NI27 1593 aaKnown RBP12.7□□□□□ -0.38
GAPDHP16-201ENST00000448152 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
GAPDHP16-201ENST00000448152 NESP48681 1621 aa12.7□□□□□ -0.38
GAPDHP16-201ENST00000448152 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
GAPDHP16-201ENST00000448152 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
GAPDHP16-201ENST00000448152 GABBR2O75899 941 aa12.63□□□□□ -0.39
GAPDHP16-201ENST00000448152 LHX8Q68G74 356 aa12.59□□□□□ -0.39
GAPDHP16-201ENST00000448152 KLHL34Q8N239 644 aa12.59□□□□□ -0.39
GAPDHP16-201ENST00000448152 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
GAPDHP16-201ENST00000448152 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
GAPDHP16-201ENST00000448152 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
GAPDHP16-201ENST00000448152 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
GAPDHP16-201ENST00000448152 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
GAPDHP16-201ENST00000448152 KIF21AQ7Z4S6 1674 aa12.53□□□□□ -0.4
GAPDHP16-201ENST00000448152 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
GAPDHP16-201ENST00000448152 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
GAPDHP16-201ENST00000448152 NUBP1P53384 320 aa12.49□□□□□ -0.41
GAPDHP16-201ENST00000448152 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
GAPDHP16-201ENST00000448152 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
GAPDHP16-201ENST00000448152 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
GAPDHP16-201ENST00000448152 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
GAPDHP16-201ENST00000448152 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
GAPDHP16-201ENST00000448152 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
GAPDHP16-201ENST00000448152 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
GAPDHP16-201ENST00000448152 GSE1Q14687 1217 aa12.42□□□□□ -0.42
GAPDHP16-201ENST00000448152 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
GAPDHP16-201ENST00000448152 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
GAPDHP16-201ENST00000448152 WDR62O43379 1518 aa12.38□□□□□ -0.43
GAPDHP16-201ENST00000448152 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
GAPDHP16-201ENST00000448152 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
GAPDHP16-201ENST00000448152 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
GAPDHP16-201ENST00000448152 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
GAPDHP16-201ENST00000448152 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
GAPDHP16-201ENST00000448152 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
GAPDHP16-201ENST00000448152 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
GAPDHP16-201ENST00000448152 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
GAPDHP16-201ENST00000448152 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
GAPDHP16-201ENST00000448152 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
GAPDHP16-201ENST00000448152 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
GAPDHP16-201ENST00000448152 MAP3K13O43283 966 aa12.31□□□□□ -0.44
GAPDHP16-201ENST00000448152 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
GAPDHP16-201ENST00000448152 CADPSQ9ULU8 1353 aa12.28□□□□□ -0.44
GAPDHP16-201ENST00000448152 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
GAPDHP16-201ENST00000448152 PYGBP11216 843 aa12.24□□□□□ -0.45
GAPDHP16-201ENST00000448152 ARHGEF11O15085 1522 aa12.23□□□□□ -0.45
GAPDHP16-201ENST00000448152 TIE1P35590 1138 aa12.23□□□□□ -0.45
GAPDHP16-201ENST00000448152 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
GAPDHP16-201ENST00000448152 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
GAPDHP16-201ENST00000448152 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
GAPDHP16-201ENST00000448152 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
GAPDHP16-201ENST00000448152 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
GAPDHP16-201ENST00000448152 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
GAPDHP16-201ENST00000448152 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
GAPDHP16-201ENST00000448152 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
GAPDHP16-201ENST00000448152 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
GAPDHP16-201ENST00000448152 C7P10643 843 aa12.14□□□□□ -0.47
GAPDHP16-201ENST00000448152 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
GAPDHP16-201ENST00000448152 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
GAPDHP16-201ENST00000448152 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
GAPDHP16-201ENST00000448152 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
GAPDHP16-201ENST00000448152 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
GAPDHP16-201ENST00000448152 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
GAPDHP16-201ENST00000448152 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
GAPDHP16-201ENST00000448152 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
GAPDHP16-201ENST00000448152 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
GAPDHP16-201ENST00000448152 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
GAPDHP16-201ENST00000448152 ARAP1Q96P48 1450 aa12.08□□□□□ -0.48
GAPDHP16-201ENST00000448152 IER5LQ5T953 404 aa12.06□□□□□ -0.48
GAPDHP16-201ENST00000448152 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
GAPDHP16-201ENST00000448152 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
GAPDHP16-201ENST00000448152 CFTRP13569 1480 aa12.04□□□□□ -0.48
GAPDHP16-201ENST00000448152 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
GAPDHP16-201ENST00000448152 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
GAPDHP16-201ENST00000448152 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
GAPDHP16-201ENST00000448152 SEC24BO95487 1268 aa12.02□□□□□ -0.49
GAPDHP16-201ENST00000448152 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
GAPDHP16-201ENST00000448152 WIZO95785 1651 aa12□□□□□ -0.49
GAPDHP16-201ENST00000448152 PSEN1P49768 467 aa12□□□□□ -0.49
GAPDHP16-201ENST00000448152 OTUD5Q96G74 571 aa12□□□□□ -0.49
GAPDHP16-201ENST00000448152 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
GAPDHP16-201ENST00000448152 CHD1O14646 1710 aa11.98□□□□□ -0.49
GAPDHP16-201ENST00000448152 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
GAPDHP16-201ENST00000448152 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
GAPDHP16-201ENST00000448152 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
GAPDHP16-201ENST00000448152 MAMSTRQ6ZN01 415 aa11.95□□□□□ -0.5
GAPDHP16-201ENST00000448152 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
GAPDHP16-201ENST00000448152 PLCG2P16885 1265 aa11.94□□□□□ -0.5
GAPDHP16-201ENST00000448152 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms