RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
PPFIA4-204ENST00000447715 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
PPFIA4-204ENST00000447715 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
PPFIA4-204ENST00000447715 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
PPFIA4-204ENST00000447715 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
PPFIA4-204ENST00000447715 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
PPFIA4-204ENST00000447715 GOLGA6L22H0YM25 854 aa17.73■□□□□ 0.43
PPFIA4-204ENST00000447715 BECN1Q14457 450 aa17.71■□□□□ 0.43
PPFIA4-204ENST00000447715 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
PPFIA4-204ENST00000447715 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
PPFIA4-204ENST00000447715 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
PPFIA4-204ENST00000447715 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
PPFIA4-204ENST00000447715 MRS2Q9HD23 443 aa17.6■□□□□ 0.41
PPFIA4-204ENST00000447715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
PPFIA4-204ENST00000447715 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
PPFIA4-204ENST00000447715 NACADO15069 1562 aa17.59■□□□□ 0.41
PPFIA4-204ENST00000447715 CLSTN1O94985 981 aa17.58■□□□□ 0.41
PPFIA4-204ENST00000447715 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.41
PPFIA4-204ENST00000447715 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
PPFIA4-204ENST00000447715 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
PPFIA4-204ENST00000447715 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
PPFIA4-204ENST00000447715 ERICH6BQ5W0A0 696 aa17.56■□□□□ 0.4
PPFIA4-204ENST00000447715 GOLGA6L6A8MZA4 724 aa17.51■□□□□ 0.39
PPFIA4-204ENST00000447715 CASC1Q6TDU7 716 aa17.5■□□□□ 0.39
PPFIA4-204ENST00000447715 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
PPFIA4-204ENST00000447715 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
PPFIA4-204ENST00000447715 ARID3AQ99856 593 aa17.49■□□□□ 0.39
PPFIA4-204ENST00000447715 CHIC2Q9UKJ5 165 aa17.45■□□□□ 0.38
PPFIA4-204ENST00000447715 FGD1P98174 961 aa17.42■□□□□ 0.38
PPFIA4-204ENST00000447715 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
PPFIA4-204ENST00000447715 NPHP1O15259 732 aa17.42■□□□□ 0.38
PPFIA4-204ENST00000447715 PRM3Q9NNZ6 103 aa17.42■□□□□ 0.38
PPFIA4-204ENST00000447715 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
PPFIA4-204ENST00000447715 CHAF1AQ13111 956 aaPredicted RBP17.4■□□□□ 0.38
PPFIA4-204ENST00000447715 PPM1GO15355 546 aaPredicted RBP17.39■□□□□ 0.37
PPFIA4-204ENST00000447715 NRDCO43847 1150 aa17.39■□□□□ 0.37
PPFIA4-204ENST00000447715 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
PPFIA4-204ENST00000447715 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
PPFIA4-204ENST00000447715 RGS3P49796 1198 aa17.37■□□□□ 0.37
PPFIA4-204ENST00000447715 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
PPFIA4-204ENST00000447715 PDE4CQ08493 712 aa17.35■□□□□ 0.37
PPFIA4-204ENST00000447715 KCNJ4P48050 445 aa17.34■□□□□ 0.37
PPFIA4-204ENST00000447715 MSNP26038 577 aaKnown RBP17.34■□□□□ 0.37
PPFIA4-204ENST00000447715 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
PPFIA4-204ENST00000447715 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
PPFIA4-204ENST00000447715 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.37
PPFIA4-204ENST00000447715 NEUROD2Q15784 382 aa17.33■□□□□ 0.37
PPFIA4-204ENST00000447715 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
PPFIA4-204ENST00000447715 MIER1Q8N108 512 aa17.33■□□□□ 0.36
PPFIA4-204ENST00000447715 ISY1Q9ULR0 285 aaKnown RBP17.33■□□□□ 0.36
PPFIA4-204ENST00000447715 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
PPFIA4-204ENST00000447715 NOC3LQ8WTT2 800 aaKnown RBP17.32■□□□□ 0.36
PPFIA4-204ENST00000447715 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
PPFIA4-204ENST00000447715 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
PPFIA4-204ENST00000447715 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
PPFIA4-204ENST00000447715 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.35
PPFIA4-204ENST00000447715 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
PPFIA4-204ENST00000447715 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
PPFIA4-204ENST00000447715 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
PPFIA4-204ENST00000447715 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.24■□□□□ 0.35
PPFIA4-204ENST00000447715 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
PPFIA4-204ENST00000447715 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
PPFIA4-204ENST00000447715 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
PPFIA4-204ENST00000447715 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
PPFIA4-204ENST00000447715 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
PPFIA4-204ENST00000447715 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
PPFIA4-204ENST00000447715 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
PPFIA4-204ENST00000447715 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
PPFIA4-204ENST00000447715 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
PPFIA4-204ENST00000447715 HSCBQ8IWL3 235 aa17.17■□□□□ 0.34
PPFIA4-204ENST00000447715 DEKP35659 375 aaKnown RBP17.16■□□□□ 0.34
PPFIA4-204ENST00000447715 FBXO3Q9UK99 471 aa17.16■□□□□ 0.34
PPFIA4-204ENST00000447715 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
PPFIA4-204ENST00000447715 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
PPFIA4-204ENST00000447715 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
PPFIA4-204ENST00000447715 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.345e-6■■□□□ 11.4
PPFIA4-204ENST00000447715 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.34
PPFIA4-204ENST00000447715 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
PPFIA4-204ENST00000447715 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
PPFIA4-204ENST00000447715 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
PPFIA4-204ENST00000447715 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
PPFIA4-204ENST00000447715 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
PPFIA4-204ENST00000447715 TRHP20396 242 aaPredicted RBP17.07■□□□□ 0.32
PPFIA4-204ENST00000447715 GOLGA6L1Q8N7Z2 621 aa17.07■□□□□ 0.32
PPFIA4-204ENST00000447715 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 EEA1Q15075 1411 aa17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 APBB1O00213 710 aa17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 MCCP23508 829 aa17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
PPFIA4-204ENST00000447715 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
PPFIA4-204ENST00000447715 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
PPFIA4-204ENST00000447715 CREBRFQ8IUR6 639 aa17.05■□□□□ 0.32
PPFIA4-204ENST00000447715 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
PPFIA4-204ENST00000447715 CLIP1P30622 1438 aa17.03■□□□□ 0.32
PPFIA4-204ENST00000447715 KCNH8Q96L42 1107 aa17.02■□□□□ 0.31
PPFIA4-204ENST00000447715 SOX12O15370 315 aa17.01■□□□□ 0.31
PPFIA4-204ENST00000447715 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
PPFIA4-204ENST00000447715 CC2D1BQ5T0F9 858 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms