RNA–Protein interactions for RNA: ENST00000447223.5

ACAA1-208, Transcript of acetyl-CoA acyltransferase 1, human

TSL 3

Gene ACAA1, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAA1-208	ENST00000447223	ERICH3	Q5RHP9	1530 aa		29.25	■■■□□ 2.27
ACAA1-208	ENST00000447223	ILDR1	Q86SU0	546 aa	Predicted RBP	29.22	■■■□□ 2.27
ACAA1-208	ENST00000447223	MAPKBP1	O60336	1514 aa		29.17	■■■□□ 2.26
ACAA1-208	ENST00000447223	TOP2B	Q02880	1626 aa		29.16	■■■□□ 2.26
ACAA1-208	ENST00000447223	KDM6B	O15054	1643 aa		29.13	■■■□□ 2.25
ACAA1-208	ENST00000447223	SUPT5H	O00267	1087 aa	Known RBP	29.13	■■■□□ 2.25
ACAA1-208	ENST00000447223	DIP2B	Q9P265	1576 aa		29.13	■■■□□ 2.25
ACAA1-208	ENST00000447223	BIVM-ERCC5	R4GMW8	1640 aa		29.11	■■■□□ 2.25
ACAA1-208	ENST00000447223	ADCY10	Q96PN6	1610 aa		29.04	■■■□□ 2.24
ACAA1-208	ENST00000447223	RUSC2	Q8N2Y8	1516 aa		29.03	■■■□□ 2.24
ACAA1-208	ENST00000447223	TSPOAP1	O95153	1857 aa		28.95	■■■□□ 2.22
ACAA1-208	ENST00000447223	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.94	■■■□□ 2.22
ACAA1-208	ENST00000447223	KIAA0586	Q9BVV6	1533 aa		28.92	■■■□□ 2.22
ACAA1-208	ENST00000447223	PTPRG	P23470	1445 aa		28.88	■■■□□ 2.21
ACAA1-208	ENST00000447223	ADGRL1	O94910	1474 aa		28.81	■■■□□ 2.2
ACAA1-208	ENST00000447223	IGF1R	P08069	1367 aa		28.79	■■■□□ 2.2
ACAA1-208	ENST00000447223	ASXL2	Q76L83	1435 aa		28.76	■■■□□ 2.19
ACAA1-208	ENST00000447223	PLB1	Q6P1J6	1458 aa		28.75	■■■□□ 2.19
ACAA1-208	ENST00000447223	ABCC2	Q92887	1545 aa		28.74	■■■□□ 2.19
ACAA1-208	ENST00000447223	TNIK	Q9UKE5	1360 aa		28.74	■■■□□ 2.19
ACAA1-208	ENST00000447223	CARMIL2	Q6F5E8	1435 aa		28.73	■■■□□ 2.19
ACAA1-208	ENST00000447223	KIF27	Q86VH2	1401 aa		28.7	■■■□□ 2.19
ACAA1-208	ENST00000447223	GLI2	P10070	1586 aa		28.67	■■■□□ 2.18
ACAA1-208	ENST00000447223	CUL7	Q14999	1698 aa		28.63	■■■□□ 2.17
ACAA1-208	ENST00000447223	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.62	■■■□□ 2.17
ACAA1-208	ENST00000447223	HECW2	Q9P2P5	1572 aa		28.62	■■■□□ 2.17
ACAA1-208	ENST00000447223	CARMIL1	Q5VZK9	1371 aa		28.61	■■■□□ 2.17
ACAA1-208	ENST00000447223	PPRC1	Q5VV67	1664 aa	Known RBP	28.61	■■■□□ 2.17
ACAA1-208	ENST00000447223	UACA	Q9BZF9	1416 aa		28.6	■■■□□ 2.17
ACAA1-208	ENST00000447223	UHRF1BP1L	A0JNW5	1464 aa		28.59	■■■□□ 2.17
ACAA1-208	ENST00000447223	TEX14	Q8IWB6	1497 aa		28.56	■■■□□ 2.16
ACAA1-208	ENST00000447223	EPRS	P07814	1512 aa	Known RBP	28.54	■■■□□ 2.16
ACAA1-208	ENST00000447223	IQGAP2	Q13576	1575 aa		28.48	■■■□□ 2.15
ACAA1-208	ENST00000447223	KDM5B	Q9UGL1	1544 aa		28.46	■■■□□ 2.15
ACAA1-208	ENST00000447223	MAP3K4	Q9Y6R4	1608 aa		28.44	■■■□□ 2.14
ACAA1-208	ENST00000447223	DISP1	Q96F81	1524 aa		28.41	■■■□□ 2.14
ACAA1-208	ENST00000447223	FBXO41	Q8TF61	875 aa		28.4	■■■□□ 2.14
ACAA1-208	ENST00000447223	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.33	■■■□□ 2.13
ACAA1-208	ENST00000447223	WDR7	Q9Y4E6	1490 aa		28.33	■■■□□ 2.13
ACAA1-208	ENST00000447223	KCNH8	Q96L42	1107 aa		28.32	■■■□□ 2.12
ACAA1-208	ENST00000447223	CD109	Q6YHK3	1445 aa		28.3	■■■□□ 2.12
ACAA1-208	ENST00000447223	UGGT2	Q9NYU1	1516 aa		28.27	■■■□□ 2.12
ACAA1-208	ENST00000447223	MAGI3	Q5TCQ9	1506 aa		28.23	■■■□□ 2.11
ACAA1-208	ENST00000447223	RAPGEF2	Q9Y4G8	1499 aa		28.21	■■■□□ 2.11
ACAA1-208	ENST00000447223	KIAA0556	O60303	1618 aa		28.21	■■■□□ 2.11
ACAA1-208	ENST00000447223	CFAP43	Q8NDM7	1665 aa		28.11	■■■□□ 2.09
ACAA1-208	ENST00000447223	KIF21B	O75037	1637 aa		28.1	■■■□□ 2.09
ACAA1-208	ENST00000447223	PTPRM	P28827	1452 aa		28.05	■■■□□ 2.08
ACAA1-208	ENST00000447223	GOLGA3	Q08378	1498 aa		28.05	■■■□□ 2.08
ACAA1-208	ENST00000447223	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.04	■■■□□ 2.08
ACAA1-208	ENST00000447223	ARAP3	Q8WWN8	1544 aa		28.03	■■■□□ 2.08
ACAA1-208	ENST00000447223	ARID3C	A6NKF2	412 aa		28.02	■■■□□ 2.08
ACAA1-208	ENST00000447223	ABCA8	O94911	1581 aa		28	■■■□□ 2.07
ACAA1-208	ENST00000447223	ARID4B	Q4LE39	1312 aa	Predicted RBP	27.99	■■■□□ 2.07
ACAA1-208	ENST00000447223	RAPGEF3	O95398	923 aa		27.97	■■■□□ 2.07
ACAA1-208	ENST00000447223	PHLDB1	Q86UU1	1377 aa		27.97	■■■□□ 2.07
ACAA1-208	ENST00000447223	ADAMTSL3	P82987	1691 aa		27.91	■■■□□ 2.06
ACAA1-208	ENST00000447223	PCF11	O94913	1555 aa	Known RBP	27.87	■■■□□ 2.05
ACAA1-208	ENST00000447223	P3H3	Q8IVL6	736 aa		27.87	■■■□□ 2.05
ACAA1-208	ENST00000447223	ATP10B	O94823	1461 aa		27.85	■■■□□ 2.05
ACAA1-208	ENST00000447223	CTTNBP2	Q8WZ74	1663 aa		27.84	■■■□□ 2.05
ACAA1-208	ENST00000447223	LMTK3	Q96Q04	1460 aa		27.83	■■■□□ 2.05
ACAA1-208	ENST00000447223	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	27.83	■■■□□ 2.05
ACAA1-208	ENST00000447223	HNRNPUL2	Q1KMD3	747 aa	Known RBP	27.83	■■■□□ 2.05
ACAA1-208	ENST00000447223	PLPPR3	Q6T4P5	718 aa		27.81	■■■□□ 2.04
ACAA1-208	ENST00000447223	HSPA2	P54652	639 aa		27.8	■■■□□ 2.04
ACAA1-208	ENST00000447223	NEO1	Q92859	1461 aa		27.8	■■■□□ 2.04
ACAA1-208	ENST00000447223	MADD	Q8WXG6	1647 aa		27.78	■■■□□ 2.04
ACAA1-208	ENST00000447223	BCORL1	Q5H9F3	1711 aa		27.77	■■■□□ 2.04
ACAA1-208	ENST00000447223	ABCA9	Q8IUA7	1624 aa		27.77	■■■□□ 2.04
ACAA1-208	ENST00000447223	CERK	Q8TCT0	537 aa		27.75	■■■□□ 2.03
ACAA1-208	ENST00000447223	PRX	Q9BXM0	1461 aa		27.68	■■■□□ 2.02
ACAA1-208	ENST00000447223	FRMPD1	Q5SYB0	1578 aa		27.66	■■■□□ 2.02
ACAA1-208	ENST00000447223	DENND4B	O75064	1496 aa	Predicted RBP	27.65	■■■□□ 2.02
ACAA1-208	ENST00000447223	POGZ	Q7Z3K3	1410 aa		27.65	■■■□□ 2.02
ACAA1-208	ENST00000447223	RIMS1	Q86UR5	1692 aa	Known RBP	27.65	■■■□□ 2.02
ACAA1-208	ENST00000447223	DISP3	Q9P2K9	1392 aa		27.6	■■■□□ 2.01
ACAA1-208	ENST00000447223	PLEKHD1	A6NEE1	506 aa		27.6	■■■□□ 2.01
ACAA1-208	ENST00000447223	MLEC	Q14165	292 aa		27.6	■■■□□ 2.01
ACAA1-208	ENST00000447223	ARHGEF40	Q8TER5	1519 aa		27.6	■■■□□ 2.01
ACAA1-208	ENST00000447223	AKNA	Q7Z591	1439 aa		27.59	■■■□□ 2.01
ACAA1-208	ENST00000447223	FANCA	O15360	1455 aa		27.57	■■■□□ 2
ACAA1-208	ENST00000447223	FHOD3	Q2V2M9	1422 aa		27.56	■■■□□ 2
ACAA1-208	ENST00000447223	RAPGEF6	Q8TEU7	1601 aa		27.56	■■■□□ 2
ACAA1-208	ENST00000447223	ILDR2	Q71H61	639 aa		27.55	■■■□□ 2
ACAA1-208	ENST00000447223	SOCS7	O14512	581 aa		27.54	■■■□□ 2
ACAA1-208	ENST00000447223	RANGAP1	P46060	587 aa	Predicted RBP	27.51	■■□□□ 1.99
ACAA1-208	ENST00000447223	NUP153	P49790	1475 aa	Known RBP	27.5	■■□□□ 1.99
ACAA1-208	ENST00000447223	YEATS2	Q9ULM3	1422 aa		27.48	■■□□□ 1.99
ACAA1-208	ENST00000447223	ZFYVE16	Q7Z3T8	1539 aa		27.46	■■□□□ 1.99
ACAA1-208	ENST00000447223	RICTOR	Q6R327	1708 aa		27.46	■■□□□ 1.99
ACAA1-208	ENST00000447223	SAMD9	Q5K651	1589 aa		27.45	■■□□□ 1.99
ACAA1-208	ENST00000447223	DMRT2	Q9Y5R5	561 aa		27.45	■■□□□ 1.98
ACAA1-208	ENST00000447223	EFCAB5	A4FU69	1503 aa		27.45	■■□□□ 1.98
ACAA1-208	ENST00000447223	MAGI2	Q86UL8	1455 aa		27.43	■■□□□ 1.98
ACAA1-208	ENST00000447223	CFAP74	Q9C0B2	1584 aa		27.42	■■□□□ 1.98
ACAA1-208	ENST00000447223	ZMYM4	Q5VZL5	1548 aa		27.41	■■□□□ 1.98
ACAA1-208	ENST00000447223	CSRNP3	Q8WYN3	585 aa		27.41	■■□□□ 1.98
ACAA1-208	ENST00000447223	CEBPA	P49715	358 aa	Predicted RBP	27.39	■■□□□ 1.98
ACAA1-208	ENST00000447223	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.37	■■□□□ 1.97

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