RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
SHANK3-203ENST00000445220 BECN1Q14457 450 aa24.76■■□□□ 1.55
SHANK3-203ENST00000445220 SLC24A1O60721 1099 aa24.74■■□□□ 1.55
SHANK3-203ENST00000445220 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
SHANK3-203ENST00000445220 RTN4Q9NQC3 1192 aaKnown RBP24.7■■□□□ 1.54
SHANK3-203ENST00000445220 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
SHANK3-203ENST00000445220 NOP58Q9Y2X3 529 aaKnown RBP24.66■■□□□ 1.54
SHANK3-203ENST00000445220 SUPT16HQ9Y5B9 1047 aaKnown RBP24.66■■□□□ 1.54
SHANK3-203ENST00000445220 NAP1L5Q96NT1 182 aaPredicted RBP24.63■■□□□ 1.53
SHANK3-203ENST00000445220 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
SHANK3-203ENST00000445220 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
SHANK3-203ENST00000445220 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
SHANK3-203ENST00000445220 GOLGA6L22H0YM25 854 aa24.58■■□□□ 1.53
SHANK3-203ENST00000445220 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
SHANK3-203ENST00000445220 WDR43Q15061 677 aaKnown RBP eCLIP24.57■■□□□ 1.52
SHANK3-203ENST00000445220 CEP162Q5TB80 1403 aa24.56■■□□□ 1.52
SHANK3-203ENST00000445220 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
SHANK3-203ENST00000445220 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
SHANK3-203ENST00000445220 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SHANK3-203ENST00000445220 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
SHANK3-203ENST00000445220 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
SHANK3-203ENST00000445220 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
SHANK3-203ENST00000445220 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
SHANK3-203ENST00000445220 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
SHANK3-203ENST00000445220 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
SHANK3-203ENST00000445220 NCLP19338 710 aaKnown RBP24.47■■□□□ 1.51
SHANK3-203ENST00000445220 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
SHANK3-203ENST00000445220 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
SHANK3-203ENST00000445220 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
SHANK3-203ENST00000445220 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
SHANK3-203ENST00000445220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.44■■□□□ 1.51e-6■□□□□ 9.5
SHANK3-203ENST00000445220 PTMAP06454 111 aaKnown RBP24.43■■□□□ 1.5
SHANK3-203ENST00000445220 RBM19Q9Y4C8 960 aaKnown RBP24.41■■□□□ 1.5
SHANK3-203ENST00000445220 BAZ1AQ9NRL2 1556 aaPredicted RBP24.41■■□□□ 1.5
SHANK3-203ENST00000445220 DNTTIP2Q5QJE6 756 aaKnown RBP24.4■■□□□ 1.5
SHANK3-203ENST00000445220 MYH16Q9H6N6 1097 aa24.37■■□□□ 1.49
SHANK3-203ENST00000445220 CDK11BP21127 795 aaKnown RBP24.33■■□□□ 1.49
SHANK3-203ENST00000445220 PLEKHD1A6NEE1 506 aa24.32■■□□□ 1.48
SHANK3-203ENST00000445220 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
SHANK3-203ENST00000445220 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
SHANK3-203ENST00000445220 L1TD1Q5T7N2 865 aaKnown RBP24.27■■□□□ 1.48
SHANK3-203ENST00000445220 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
SHANK3-203ENST00000445220 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
SHANK3-203ENST00000445220 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
SHANK3-203ENST00000445220 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
SHANK3-203ENST00000445220 TSHZ2Q9NRE2 1034 aa24.17■■□□□ 1.46
SHANK3-203ENST00000445220 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
SHANK3-203ENST00000445220 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
SHANK3-203ENST00000445220 RGS3P49796 1198 aa24.14■■□□□ 1.45
SHANK3-203ENST00000445220 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
SHANK3-203ENST00000445220 MSNP26038 577 aaKnown RBP24.1■■□□□ 1.45
SHANK3-203ENST00000445220 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
SHANK3-203ENST00000445220 ZRSR1Q15695 479 aaKnown RBP24.08■■□□□ 1.45
SHANK3-203ENST00000445220 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.08■■□□□ 1.45
SHANK3-203ENST00000445220 CCER2I3L3R5 266 aa24.07■■□□□ 1.44
SHANK3-203ENST00000445220 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
SHANK3-203ENST00000445220 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
SHANK3-203ENST00000445220 PNNQ9H307 717 aaKnown RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 CHAF1AQ13111 956 aaPredicted RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 HSP90AB1P08238 724 aaKnown RBP24.03■■□□□ 1.44
SHANK3-203ENST00000445220 PLCB2Q00722 1185 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
SHANK3-203ENST00000445220 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
SHANK3-203ENST00000445220 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
SHANK3-203ENST00000445220 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
SHANK3-203ENST00000445220 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
SHANK3-203ENST00000445220 HSCBQ8IWL3 235 aa23.96■■□□□ 1.43
SHANK3-203ENST00000445220 CUX2O14529 1486 aa23.95■■□□□ 1.42
SHANK3-203ENST00000445220 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
SHANK3-203ENST00000445220 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
SHANK3-203ENST00000445220 CFAP53Q96M91 514 aa23.94■■□□□ 1.42
SHANK3-203ENST00000445220 GOLGA6L6A8MZA4 724 aa23.93■■□□□ 1.42
SHANK3-203ENST00000445220 SOGA1O94964 1423 aa23.93■■□□□ 1.42
SHANK3-203ENST00000445220 KNSTRNQ9Y448 316 aa23.92■■□□□ 1.42
SHANK3-203ENST00000445220 TPRNQ4KMQ1 711 aa23.92■■□□□ 1.42
SHANK3-203ENST00000445220 NRDCO43847 1150 aa23.91■■□□□ 1.42
SHANK3-203ENST00000445220 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
SHANK3-203ENST00000445220 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.41
SHANK3-203ENST00000445220 IPO9Q96P70 1041 aaKnown RBP23.89■■□□□ 1.41
SHANK3-203ENST00000445220 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
SHANK3-203ENST00000445220 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
SHANK3-203ENST00000445220 TCERG1O14776 1098 aaKnown RBP23.86■■□□□ 1.41
SHANK3-203ENST00000445220 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
SHANK3-203ENST00000445220 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
SHANK3-203ENST00000445220 MS4A1P11836 297 aa23.85■■□□□ 1.41
SHANK3-203ENST00000445220 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
SHANK3-203ENST00000445220 PTMSP20962 102 aa23.82■■□□□ 1.4
SHANK3-203ENST00000445220 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
SHANK3-203ENST00000445220 GBP4Q96PP9 640 aa23.78■■□□□ 1.4
SHANK3-203ENST00000445220 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
SHANK3-203ENST00000445220 GOLGA6L3A6NEY3 463 aa23.76■■□□□ 1.39
SHANK3-203ENST00000445220 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
SHANK3-203ENST00000445220 HSP90AA2PQ14568 343 aaPredicted RBP23.76■■□□□ 1.39
SHANK3-203ENST00000445220 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 NEUROD2Q15784 382 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
SHANK3-203ENST00000445220 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms